RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 PRG4Q92954 1404 aaPredicted RBP19.36■□□□□ 0.69
ACTN4-209ENST00000586538 JPH4Q96JJ6 628 aa19.36■□□□□ 0.69
ACTN4-209ENST00000586538 KIAA0586Q9BVV6 1533 aa19.33■□□□□ 0.68
ACTN4-209ENST00000586538 CARMIL1Q5VZK9 1371 aa19.3■□□□□ 0.68
ACTN4-209ENST00000586538 NPM1P06748 294 aaKnown RBP eCLIP19.21■□□□□ 0.67
ACTN4-209ENST00000586538 CARMIL2Q6F5E8 1435 aa19.2■□□□□ 0.66
ACTN4-209ENST00000586538 IQGAP2Q13576 1575 aa19.18■□□□□ 0.66
ACTN4-209ENST00000586538 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
ACTN4-209ENST00000586538 MAPKBP1O60336 1514 aa19.13■□□□□ 0.65
ACTN4-209ENST00000586538 TNIKQ9UKE5 1360 aa19.11■□□□□ 0.65
ACTN4-209ENST00000586538 PTPRGP23470 1445 aa19.1■□□□□ 0.65
ACTN4-209ENST00000586538 ADCY10Q96PN6 1610 aa19.1■□□□□ 0.65
ACTN4-209ENST00000586538 ABCC10Q5T3U5 1492 aa19.06■□□□□ 0.64
ACTN4-209ENST00000586538 KIF13AQ9H1H9 1805 aa19.06■□□□□ 0.64
ACTN4-209ENST00000586538 UGGT2Q9NYU1 1516 aa19.05■□□□□ 0.64
ACTN4-209ENST00000586538 CTTNBP2Q8WZ74 1663 aa19.03■□□□□ 0.64
ACTN4-209ENST00000586538 ABCC2Q92887 1545 aa19■□□□□ 0.63
ACTN4-209ENST00000586538 FAM69CQ0P6D2 419 aa19■□□□□ 0.63
ACTN4-209ENST00000586538 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
ACTN4-209ENST00000586538 DIP2BQ9P265 1576 aa19■□□□□ 0.63
ACTN4-209ENST00000586538 DISP1Q96F81 1524 aa19■□□□□ 0.63
ACTN4-209ENST00000586538 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
ACTN4-209ENST00000586538 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
ACTN4-209ENST00000586538 UACAQ9BZF9 1416 aa18.98■□□□□ 0.63
ACTN4-209ENST00000586538 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
ACTN4-209ENST00000586538 TTBK1Q5TCY1 1321 aaPredicted RBP18.97■□□□□ 0.63
ACTN4-209ENST00000586538 EEA1Q15075 1411 aa18.95■□□□□ 0.62
ACTN4-209ENST00000586538 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
ACTN4-209ENST00000586538 PLB1Q6P1J6 1458 aa18.95■□□□□ 0.62
ACTN4-209ENST00000586538 ASXL2Q76L83 1435 aa18.89■□□□□ 0.61
ACTN4-209ENST00000586538 KDM5BQ9UGL1 1544 aa18.89■□□□□ 0.61
ACTN4-209ENST00000586538 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
ACTN4-209ENST00000586538 GLI2P10070 1586 aa18.86■□□□□ 0.61
ACTN4-209ENST00000586538 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
ACTN4-209ENST00000586538 KDM6BO15054 1643 aa18.84■□□□□ 0.61
ACTN4-209ENST00000586538 ZCCHC11Q5TAX3 1644 aaKnown RBP18.83■□□□□ 0.61
ACTN4-209ENST00000586538 TSPOAP1O95153 1857 aa18.82■□□□□ 0.6
ACTN4-209ENST00000586538 ABCA8O94911 1581 aa18.78■□□□□ 0.6
ACTN4-209ENST00000586538 EPRSP07814 1512 aaKnown RBP18.78■□□□□ 0.6
ACTN4-209ENST00000586538 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.6
ACTN4-209ENST00000586538 WDR7Q9Y4E6 1490 aa18.77■□□□□ 0.59
ACTN4-209ENST00000586538 MAP3K4Q9Y6R4 1608 aa18.74■□□□□ 0.59
ACTN4-209ENST00000586538 SAMD9Q5K651 1589 aa18.73■□□□□ 0.59
ACTN4-209ENST00000586538 KIF21BO75037 1637 aa18.71■□□□□ 0.59
ACTN4-209ENST00000586538 PPRC1Q5VV67 1664 aaKnown RBP18.69■□□□□ 0.58
ACTN4-209ENST00000586538 CFAP43Q8NDM7 1665 aa18.67■□□□□ 0.58
ACTN4-209ENST00000586538 EFCAB5A4FU69 1503 aa18.65■□□□□ 0.58
ACTN4-209ENST00000586538 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
ACTN4-209ENST00000586538 P3H3Q8IVL6 736 aa18.64■□□□□ 0.57
ACTN4-209ENST00000586538 CD109Q6YHK3 1445 aa18.62■□□□□ 0.57
ACTN4-209ENST00000586538 MAGI3Q5TCQ9 1506 aa18.62■□□□□ 0.57
ACTN4-209ENST00000586538 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
ACTN4-209ENST00000586538 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
ACTN4-209ENST00000586538 ATP10BO94823 1461 aa18.58■□□□□ 0.57
ACTN4-209ENST00000586538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.56■□□□□ 0.56
ACTN4-209ENST00000586538 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
ACTN4-209ENST00000586538 FHOD3Q2V2M9 1422 aa18.56■□□□□ 0.56
ACTN4-209ENST00000586538 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
ACTN4-209ENST00000586538 PHLDB1Q86UU1 1377 aa18.54■□□□□ 0.56
ACTN4-209ENST00000586538 ABCA9Q8IUA7 1624 aa18.53■□□□□ 0.56
ACTN4-209ENST00000586538 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
ACTN4-209ENST00000586538 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.56
ACTN4-209ENST00000586538 ARID3CA6NKF2 412 aa18.51■□□□□ 0.55
ACTN4-209ENST00000586538 COL17A1Q9UMD9 1497 aaPredicted RBP18.5■□□□□ 0.55
ACTN4-209ENST00000586538 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
ACTN4-209ENST00000586538 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
ACTN4-209ENST00000586538 ARAP3Q8WWN8 1544 aa18.47■□□□□ 0.55
ACTN4-209ENST00000586538 NEO1Q92859 1461 aa18.46■□□□□ 0.54
ACTN4-209ENST00000586538 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
ACTN4-209ENST00000586538 KDM4FA0A1W2PPD8 638 aa18.43■□□□□ 0.54
ACTN4-209ENST00000586538 ADGRL1O94910 1474 aa18.42■□□□□ 0.54
ACTN4-209ENST00000586538 CFAP74Q9C0B2 1584 aa18.42■□□□□ 0.54
ACTN4-209ENST00000586538 CDK11AQ9UQ88 783 aaPredicted RBP18.39■□□□□ 0.53
ACTN4-209ENST00000586538 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.53
ACTN4-209ENST00000586538 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
ACTN4-209ENST00000586538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.33■□□□□ 0.53
ACTN4-209ENST00000586538 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
ACTN4-209ENST00000586538 CDK13Q14004 1512 aaKnown RBP18.33■□□□□ 0.52
ACTN4-209ENST00000586538 FANCAO15360 1455 aa18.33■□□□□ 0.52
ACTN4-209ENST00000586538 CLIP1P30622 1438 aa18.31■□□□□ 0.52
ACTN4-209ENST00000586538 DENND4BO75064 1496 aaPredicted RBP18.3■□□□□ 0.52
ACTN4-209ENST00000586538 TTC37Q6PGP7 1564 aa18.3■□□□□ 0.52
ACTN4-209ENST00000586538 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
ACTN4-209ENST00000586538 KIF14Q15058 1648 aa18.29■□□□□ 0.52
ACTN4-209ENST00000586538 AKNAQ7Z591 1439 aa18.29■□□□□ 0.52
ACTN4-209ENST00000586538 RAPGEF3O95398 923 aa18.26■□□□□ 0.51
ACTN4-209ENST00000586538 PLCH2O75038 1416 aa18.25■□□□□ 0.51
ACTN4-209ENST00000586538 MYO5CQ9NQX4 1742 aa18.25■□□□□ 0.51
ACTN4-209ENST00000586538 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
ACTN4-209ENST00000586538 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
ACTN4-209ENST00000586538 CASKIN1Q8WXD9 1431 aa18.24■□□□□ 0.51
ACTN4-209ENST00000586538 RICTORQ6R327 1708 aa18.23■□□□□ 0.51
ACTN4-209ENST00000586538 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
ACTN4-209ENST00000586538 ZMYM4Q5VZL5 1548 aa18.22■□□□□ 0.51
ACTN4-209ENST00000586538 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
ACTN4-209ENST00000586538 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
ACTN4-209ENST00000586538 PCF11O94913 1555 aaKnown RBP18.21■□□□□ 0.51
ACTN4-209ENST00000586538 EFCAB2Q5VUJ9 269 aa18.2■□□□□ 0.5
ACTN4-209ENST00000586538 POGZQ7Z3K3 1410 aa18.18■□□□□ 0.5
ACTN4-209ENST00000586538 ARID4BQ4LE39 1312 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms