RNA–Protein interactions for RNA: ENST00000586400.5

TMEM235-205, Transcript of transmembrane protein 235, humanhuman

TSL 1 (best) BASIC

Gene TMEM235, Length 2,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-205ENST00000586400 GAPVD1Q14C86 1478 aa32.71■■■□□ 2.83
TMEM235-205ENST00000586400 CCNB3Q8WWL7 1395 aa32.71■■■□□ 2.83
TMEM235-205ENST00000586400 CTTNBP2Q8WZ74 1663 aa32.69■■■□□ 2.82
TMEM235-205ENST00000586400 FHOD3Q2V2M9 1422 aa32.67■■■□□ 2.82
TMEM235-205ENST00000586400 EFCAB5A4FU69 1503 aa32.67■■■□□ 2.82
TMEM235-205ENST00000586400 LRRC9Q6ZRR7 1453 aa32.67■■■□□ 2.82
TMEM235-205ENST00000586400 PCF11O94913 1555 aaKnown RBP32.66■■■□□ 2.82
TMEM235-205ENST00000586400 TARBP1Q13395 1621 aaKnown RBP32.63■■■□□ 2.81
TMEM235-205ENST00000586400 DHX57Q6P158 1386 aaKnown RBP32.59■■■□□ 2.81
TMEM235-205ENST00000586400 DIEXFQ68CQ4 756 aaKnown RBP32.58■■■□□ 2.81
TMEM235-205ENST00000586400 CFAP43Q8NDM7 1665 aa32.58■■■□□ 2.81
TMEM235-205ENST00000586400 ZNF316A6NFI3 1004 aaPredicted RBP32.54■■■□□ 2.8
TMEM235-205ENST00000586400 CASKIN1Q8WXD9 1431 aa32.54■■■□□ 2.8
TMEM235-205ENST00000586400 AQRO60306 1485 aaKnown RBP eCLIP32.54■■■□□ 2.8
TMEM235-205ENST00000586400 FYCO1Q9BQS8 1478 aa32.54■■■□□ 2.8
TMEM235-205ENST00000586400 CLSPNQ9HAW4 1339 aa32.52■■■□□ 2.8
TMEM235-205ENST00000586400 PHLDB1Q86UU1 1377 aa32.52■■■□□ 2.8
TMEM235-205ENST00000586400 ATP1B4Q9UN42 357 aaPredicted RBP32.48■■■□□ 2.79
TMEM235-205ENST00000586400 MRC2Q9UBG0 1479 aa32.46■■■□□ 2.79
TMEM235-205ENST00000586400 SAMD9Q5K651 1589 aa32.45■■■□□ 2.79
TMEM235-205ENST00000586400 ITGAEP38570 1179 aa32.45■■■□□ 2.79
TMEM235-205ENST00000586400 FMN1Q68DA7 1419 aa32.45■■■□□ 2.79
TMEM235-205ENST00000586400 SNAPC4Q5SXM2 1469 aa32.42■■■□□ 2.78
TMEM235-205ENST00000586400 PBRM1Q86U86 1689 aa32.37■■■□□ 2.77
TMEM235-205ENST00000586400 RAB3GAP2Q9H2M9 1393 aa32.31■■■□□ 2.76
TMEM235-205ENST00000586400 FAM50AQ14320 339 aaKnown RBP32.28■■■□□ 2.76
TMEM235-205ENST00000586400 ADAMTS12P58397 1594 aa32.27■■■□□ 2.76
TMEM235-205ENST00000586400 LRRIQ1Q96JM4 1722 aa32.25■■■□□ 2.75
TMEM235-205ENST00000586400 GRIN2BQ13224 1484 aa32.25■■■□□ 2.75
TMEM235-205ENST00000586400 WDR62O43379 1518 aa32.25■■■□□ 2.75
TMEM235-205ENST00000586400 SETD5Q9C0A6 1442 aa32.23■■■□□ 2.75
TMEM235-205ENST00000586400 IFT140Q96RY7 1462 aa32.22■■■□□ 2.75
TMEM235-205ENST00000586400 ZNF608Q9ULD9 1512 aaPredicted RBP32.21■■■□□ 2.75
TMEM235-205ENST00000586400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.2■■■□□ 2.75
TMEM235-205ENST00000586400 MTUS2Q5JR59 1369 aa32.16■■■□□ 2.74
TMEM235-205ENST00000586400 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
TMEM235-205ENST00000586400 IQGAP2Q13576 1575 aa32.15■■■□□ 2.74
TMEM235-205ENST00000586400 MAPKBP1O60336 1514 aa32.12■■■□□ 2.73
TMEM235-205ENST00000586400 FGD6Q6ZV73 1430 aa32.12■■■□□ 2.73
TMEM235-205ENST00000586400 NCOA2Q15596 1464 aa32.05■■■□□ 2.72
TMEM235-205ENST00000586400 MAGI3Q5TCQ9 1506 aa32.01■■■□□ 2.71
TMEM235-205ENST00000586400 EHBP1L1Q8N3D4 1523 aa32.01■■■□□ 2.71
TMEM235-205ENST00000586400 UGGT2Q9NYU1 1516 aa32.01■■■□□ 2.71
TMEM235-205ENST00000586400 SCAF1Q9H7N4 1312 aaKnown RBP32.01■■■□□ 2.71
TMEM235-205ENST00000586400 ERCC6Q03468 1493 aa31.99■■■□□ 2.71
TMEM235-205ENST00000586400 SUPT6HQ7KZ85 1726 aaKnown RBP31.98■■■□□ 2.71
TMEM235-205ENST00000586400 CCDC18Q5T9S5 1454 aa31.98■■■□□ 2.71
TMEM235-205ENST00000586400 MYOM3Q5VTT5 1437 aa31.98■■■□□ 2.71
TMEM235-205ENST00000586400 EIF4G3O43432 1585 aaKnown RBP31.98■■■□□ 2.71
TMEM235-205ENST00000586400 MIER1Q8N108 512 aa31.97■■■□□ 2.71
TMEM235-205ENST00000586400 ARHGEF11O15085 1522 aa31.96■■■□□ 2.71
TMEM235-205ENST00000586400 ACIN1Q9UKV3 1341 aaKnown RBP31.95■■■□□ 2.71
TMEM235-205ENST00000586400 HECW1Q76N89 1606 aa31.95■■■□□ 2.71
TMEM235-205ENST00000586400 PTPRKQ15262 1439 aa31.95■■■□□ 2.7
TMEM235-205ENST00000586400 NEUROD1Q13562 356 aa31.94■■■□□ 2.7
TMEM235-205ENST00000586400 KIAA0586Q9BVV6 1533 aa31.94■■■□□ 2.7
TMEM235-205ENST00000586400 EPRSP07814 1512 aaKnown RBP31.92■■■□□ 2.7
TMEM235-205ENST00000586400 GRIN2AQ12879 1464 aa31.9■■■□□ 2.7
TMEM235-205ENST00000586400 DISP1Q96F81 1524 aa31.87■■■□□ 2.69
TMEM235-205ENST00000586400 SIN3AQ96ST3 1273 aa31.84■■■□□ 2.69
TMEM235-205ENST00000586400 CDK13Q14004 1512 aaKnown RBP31.84■■■□□ 2.69
TMEM235-205ENST00000586400 HFM1A2PYH4 1435 aa31.83■■■□□ 2.69
TMEM235-205ENST00000586400 PTPN23Q9H3S7 1636 aa31.83■■■□□ 2.69
TMEM235-205ENST00000586400 KIAA0556O60303 1618 aa31.82■■■□□ 2.68
TMEM235-205ENST00000586400 CENPBP07199 599 aaPredicted RBP31.82■■■□□ 2.68
TMEM235-205ENST00000586400 MAGI1Q96QZ7 1491 aaPredicted RBP31.8■■■□□ 2.68
TMEM235-205ENST00000586400 NAIPQ13075 1403 aa31.76■■■□□ 2.67
TMEM235-205ENST00000586400 TCOF1Q13428 1488 aaKnown RBP31.76■■■□□ 2.67
TMEM235-205ENST00000586400 ARID3CA6NKF2 412 aa31.74■■■□□ 2.67
TMEM235-205ENST00000586400 SYNJ2O15056 1496 aa31.73■■■□□ 2.67
TMEM235-205ENST00000586400 CHMP7Q8WUX9 453 aaPredicted RBP31.71■■■□□ 2.67
TMEM235-205ENST00000586400 CEP170Q5SW79 1584 aa31.7■■■□□ 2.67
TMEM235-205ENST00000586400 TIMELESSQ9UNS1 1208 aa31.69■■■□□ 2.66
TMEM235-205ENST00000586400 UACAQ9BZF9 1416 aa31.69■■■□□ 2.66
TMEM235-205ENST00000586400 NUP153P49790 1475 aaKnown RBP31.68■■■□□ 2.66
TMEM235-205ENST00000586400 MIA2Q96PC5 1412 aa31.67■■■□□ 2.66
TMEM235-205ENST00000586400 RAPGEF6Q8TEU7 1601 aa31.64■■■□□ 2.66
TMEM235-205ENST00000586400 YTHDC1Q96MU7 727 aaKnown RBP31.63■■■□□ 2.65
TMEM235-205ENST00000586400 FBLN2P98095 1184 aa31.6■■■□□ 2.65
TMEM235-205ENST00000586400 NUP160Q12769 1436 aa31.6■■■□□ 2.65
TMEM235-205ENST00000586400 RRP7BPQ9NSQ0 103 aa31.57■■■□□ 2.64
TMEM235-205ENST00000586400 CHIC2Q9UKJ5 165 aa31.57■■■□□ 2.64
TMEM235-205ENST00000586400 PPP1R15AO75807 674 aaPredicted RBP31.56■■■□□ 2.64
TMEM235-205ENST00000586400 AKNAQ7Z591 1439 aa31.53■■■□□ 2.64
TMEM235-205ENST00000586400 JPH4Q96JJ6 628 aa31.53■■■□□ 2.64
TMEM235-205ENST00000586400 GCC2Q8IWJ2 1684 aa31.52■■■□□ 2.64
TMEM235-205ENST00000586400 GTF3C3Q9Y5Q9 886 aa31.51■■■□□ 2.63
TMEM235-205ENST00000586400 PLB1Q6P1J6 1458 aa31.5■■■□□ 2.63
TMEM235-205ENST00000586400 CDK11AQ9UQ88 783 aaPredicted RBP31.48■■■□□ 2.63
TMEM235-205ENST00000586400 KDM6BO15054 1643 aa31.46■■■□□ 2.63
TMEM235-205ENST00000586400 CARMIL2Q6F5E8 1435 aa31.46■■■□□ 2.63
TMEM235-205ENST00000586400 PRG4Q92954 1404 aaPredicted RBP31.44■■■□□ 2.62
TMEM235-205ENST00000586400 DENND4BO75064 1496 aaPredicted RBP31.43■■■□□ 2.62
TMEM235-205ENST00000586400 TROQ12816 1431 aaPredicted RBP31.42■■■□□ 2.62
TMEM235-205ENST00000586400 TONSLQ96HA7 1378 aa31.42■■■□□ 2.62
TMEM235-205ENST00000586400 ZNF644Q9H582 1327 aaPredicted RBP31.41■■■□□ 2.62
TMEM235-205ENST00000586400 DAPK1P53355 1430 aa31.41■■■□□ 2.62
TMEM235-205ENST00000586400 ABCC5O15440 1437 aa31.39■■■□□ 2.61
TMEM235-205ENST00000586400 DNMT1P26358 1616 aaKnown RBP31.37■■■□□ 2.61
TMEM235-205ENST00000586400 ROCK1Q13464 1354 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms