RNA–Protein interactions for RNA: ENST00000586368.1

PALM3-202, Transcript of paralemmin 3, humanhuman

TSL 3

Gene PALM3, Length 469 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3-202ENST00000586368 RUSC2Q8N2Y8 1516 aa17.44■□□□□ 0.38
PALM3-202ENST00000586368 CUL7Q14999 1698 aa17.4■□□□□ 0.38
PALM3-202ENST00000586368 CARMIL1Q5VZK9 1371 aa17.37■□□□□ 0.37
PALM3-202ENST00000586368 KIAA0586Q9BVV6 1533 aa17.37■□□□□ 0.37
PALM3-202ENST00000586368 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
PALM3-202ENST00000586368 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
PALM3-202ENST00000586368 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
PALM3-202ENST00000586368 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
PALM3-202ENST00000586368 ADCY10Q96PN6 1610 aa17.27■□□□□ 0.36
PALM3-202ENST00000586368 PTPRGP23470 1445 aa17.24■□□□□ 0.35
PALM3-202ENST00000586368 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
PALM3-202ENST00000586368 CARMIL2Q6F5E8 1435 aa17.22■□□□□ 0.35
PALM3-202ENST00000586368 ABCC10Q5T3U5 1492 aa17.22■□□□□ 0.35
PALM3-202ENST00000586368 IQGAP2Q13576 1575 aa17.22■□□□□ 0.35
PALM3-202ENST00000586368 MAPKBP1O60336 1514 aa17.21■□□□□ 0.34
PALM3-202ENST00000586368 TNIKQ9UKE5 1360 aa17.2■□□□□ 0.34
PALM3-202ENST00000586368 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
PALM3-202ENST00000586368 DIP2BQ9P265 1576 aa17.16■□□□□ 0.34
PALM3-202ENST00000586368 DISP1Q96F81 1524 aa17.13■□□□□ 0.33
PALM3-202ENST00000586368 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
PALM3-202ENST00000586368 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
PALM3-202ENST00000586368 UACAQ9BZF9 1416 aa17.09■□□□□ 0.33
PALM3-202ENST00000586368 UGGT2Q9NYU1 1516 aa17.09■□□□□ 0.33
PALM3-202ENST00000586368 ASXL2Q76L83 1435 aa17.07■□□□□ 0.32
PALM3-202ENST00000586368 UHRF1BP1LA0JNW5 1464 aa17.06■□□□□ 0.32
PALM3-202ENST00000586368 KIAA0556O60303 1618 aa17.06■□□□□ 0.32
PALM3-202ENST00000586368 PLB1Q6P1J6 1458 aa17.05■□□□□ 0.32
PALM3-202ENST00000586368 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
PALM3-202ENST00000586368 KDM6BO15054 1643 aa17.03■□□□□ 0.32
PALM3-202ENST00000586368 PRXQ9BXM0 1461 aa17■□□□□ 0.31
PALM3-202ENST00000586368 KDM5BQ9UGL1 1544 aa16.99■□□□□ 0.31
PALM3-202ENST00000586368 ZCCHC11Q5TAX3 1644 aaKnown RBP16.98■□□□□ 0.31
PALM3-202ENST00000586368 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
PALM3-202ENST00000586368 GLI2P10070 1586 aa16.97■□□□□ 0.31
PALM3-202ENST00000586368 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.3
PALM3-202ENST00000586368 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
PALM3-202ENST00000586368 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
PALM3-202ENST00000586368 PPRC1Q5VV67 1664 aaKnown RBP16.93■□□□□ 0.3
PALM3-202ENST00000586368 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
PALM3-202ENST00000586368 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
PALM3-202ENST00000586368 WDR7Q9Y4E6 1490 aa16.9■□□□□ 0.3
PALM3-202ENST00000586368 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
PALM3-202ENST00000586368 ABCA8O94911 1581 aa16.89■□□□□ 0.29
PALM3-202ENST00000586368 MAP3K4Q9Y6R4 1608 aa16.88■□□□□ 0.29
PALM3-202ENST00000586368 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
PALM3-202ENST00000586368 KDM4FA0A1W2PPD8 638 aa16.87■□□□□ 0.29
PALM3-202ENST00000586368 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
PALM3-202ENST00000586368 COL17A1Q9UMD9 1497 aaPredicted RBP16.84■□□□□ 0.29
PALM3-202ENST00000586368 EEA1Q15075 1411 aa16.82■□□□□ 0.28
PALM3-202ENST00000586368 CD109Q6YHK3 1445 aa16.81■□□□□ 0.28
PALM3-202ENST00000586368 SAMD9Q5K651 1589 aa16.78■□□□□ 0.28
PALM3-202ENST00000586368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
PALM3-202ENST00000586368 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
PALM3-202ENST00000586368 ATP10BO94823 1461 aa16.77■□□□□ 0.28
PALM3-202ENST00000586368 CFAP43Q8NDM7 1665 aa16.77■□□□□ 0.28
PALM3-202ENST00000586368 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
PALM3-202ENST00000586368 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
PALM3-202ENST00000586368 RAPGEF6Q8TEU7 1601 aa16.74■□□□□ 0.27
PALM3-202ENST00000586368 FHOD3Q2V2M9 1422 aa16.73■□□□□ 0.27
PALM3-202ENST00000586368 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
PALM3-202ENST00000586368 KIF21BO75037 1637 aa16.68■□□□□ 0.26
PALM3-202ENST00000586368 NUP153P49790 1475 aaKnown RBP16.67■□□□□ 0.26
PALM3-202ENST00000586368 UBTFP17480 764 aaKnown RBP16.67■□□□□ 0.26
PALM3-202ENST00000586368 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
PALM3-202ENST00000586368 ABCA9Q8IUA7 1624 aa16.65■□□□□ 0.26
PALM3-202ENST00000586368 PLEKHD1A6NEE1 506 aa16.63■□□□□ 0.25
PALM3-202ENST00000586368 EFCAB5A4FU69 1503 aa16.63■□□□□ 0.25
PALM3-202ENST00000586368 ARAP3Q8WWN8 1544 aa16.62■□□□□ 0.25
PALM3-202ENST00000586368 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
PALM3-202ENST00000586368 ATP1B4Q9UN42 357 aaPredicted RBP16.6■□□□□ 0.25
PALM3-202ENST00000586368 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
PALM3-202ENST00000586368 NEO1Q92859 1461 aa16.57■□□□□ 0.24
PALM3-202ENST00000586368 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
PALM3-202ENST00000586368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.51■□□□□ 0.23
PALM3-202ENST00000586368 ARHGAP35Q9NRY4 1499 aa16.51■□□□□ 0.23
PALM3-202ENST00000586368 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
PALM3-202ENST00000586368 FMN1Q68DA7 1419 aa16.5■□□□□ 0.23
PALM3-202ENST00000586368 AKNAQ7Z591 1439 aa16.5■□□□□ 0.23
PALM3-202ENST00000586368 TTC37Q6PGP7 1564 aa16.5■□□□□ 0.23
PALM3-202ENST00000586368 FANCAO15360 1455 aa16.49■□□□□ 0.23
PALM3-202ENST00000586368 DENND4BO75064 1496 aaPredicted RBP16.48■□□□□ 0.23
PALM3-202ENST00000586368 FRMPD1Q5SYB0 1578 aa16.48■□□□□ 0.23
PALM3-202ENST00000586368 HECW2Q9P2P5 1572 aa16.47■□□□□ 0.23
PALM3-202ENST00000586368 HECW1Q76N89 1606 aa16.47■□□□□ 0.23
PALM3-202ENST00000586368 CDK11AQ9UQ88 783 aaPredicted RBP16.46■□□□□ 0.23
PALM3-202ENST00000586368 CFAP74Q9C0B2 1584 aa16.46■□□□□ 0.23
PALM3-202ENST00000586368 RICTORQ6R327 1708 aa16.43■□□□□ 0.22
PALM3-202ENST00000586368 PLCH2O75038 1416 aa16.41■□□□□ 0.22
PALM3-202ENST00000586368 ADAMTSL3P82987 1691 aa16.4■□□□□ 0.22
PALM3-202ENST00000586368 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
PALM3-202ENST00000586368 PTPRMP28827 1452 aa16.4■□□□□ 0.22
PALM3-202ENST00000586368 BCORL1Q5H9F3 1711 aa16.39■□□□□ 0.21
PALM3-202ENST00000586368 SCAPERQ9BY12 1400 aa16.39■□□□□ 0.21
PALM3-202ENST00000586368 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
PALM3-202ENST00000586368 KIF14Q15058 1648 aa16.38■□□□□ 0.21
PALM3-202ENST00000586368 MADDQ8WXG6 1647 aa16.37■□□□□ 0.21
PALM3-202ENST00000586368 MYO5CQ9NQX4 1742 aa16.37■□□□□ 0.21
PALM3-202ENST00000586368 ZFYVE16Q7Z3T8 1539 aa16.37■□□□□ 0.21
PALM3-202ENST00000586368 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
PALM3-202ENST00000586368 CLIP1P30622 1438 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms