RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 ADAMTS12P58397 1594 aa15.46■□□□□ 0.07
ZNF540-203ENST00000586134 FBLN2P98095 1184 aa15.46■□□□□ 0.07
ZNF540-203ENST00000586134 GRIN2AQ12879 1464 aa15.41■□□□□ 0.06
ZNF540-203ENST00000586134 FHAD1B1AJZ9 1412 aa15.41■□□□□ 0.06
ZNF540-203ENST00000586134 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
ZNF540-203ENST00000586134 NUP160Q12769 1436 aa15.39■□□□□ 0.05
ZNF540-203ENST00000586134 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
ZNF540-203ENST00000586134 SHROOM2Q13796 1616 aa15.33■□□□□ 0.05
ZNF540-203ENST00000586134 SLC24A1O60721 1099 aa15.33■□□□□ 0.04
ZNF540-203ENST00000586134 CUL7Q14999 1698 aa15.31■□□□□ 0.04
ZNF540-203ENST00000586134 CYB5RLQ6IPT4 315 aa15.31■□□□□ 0.04
ZNF540-203ENST00000586134 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
ZNF540-203ENST00000586134 KIF27Q86VH2 1401 aa15.29■□□□□ 0.04
ZNF540-203ENST00000586134 NEUROD1Q13562 356 aa15.26■□□□□ 0.03
ZNF540-203ENST00000586134 RUSC2Q8N2Y8 1516 aa15.23■□□□□ 0.03
ZNF540-203ENST00000586134 IGF1RP08069 1367 aa15.23■□□□□ 0.03
ZNF540-203ENST00000586134 ANP32EQ9BTT0 268 aa15.22■□□□□ 0.03
ZNF540-203ENST00000586134 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
ZNF540-203ENST00000586134 KIAA0586Q9BVV6 1533 aa15.17■□□□□ 0.02
ZNF540-203ENST00000586134 PRG4Q92954 1404 aaPredicted RBP15.14■□□□□ 0.01
ZNF540-203ENST00000586134 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
ZNF540-203ENST00000586134 JPH4Q96JJ6 628 aa15.13■□□□□ 0.01
ZNF540-203ENST00000586134 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
ZNF540-203ENST00000586134 IQGAP2Q13576 1575 aa15.06■□□□□ 0
ZNF540-203ENST00000586134 RAPGEF2Q9Y4G8 1499 aa15.05■□□□□ -0
ZNF540-203ENST00000586134 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
ZNF540-203ENST00000586134 TRIM26Q12899 539 aaPredicted RBP15.03■□□□□ -0
ZNF540-203ENST00000586134 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
ZNF540-203ENST00000586134 MAPKBP1O60336 1514 aa15□□□□□ -0.01
ZNF540-203ENST00000586134 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
ZNF540-203ENST00000586134 ADCY10Q96PN6 1610 aa14.99□□□□□ -0.01
ZNF540-203ENST00000586134 CTTNBP2Q8WZ74 1663 aa14.99□□□□□ -0.01
ZNF540-203ENST00000586134 KIF13AQ9H1H9 1805 aa14.98□□□□□ -0.01
ZNF540-203ENST00000586134 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.01
ZNF540-203ENST00000586134 PRXQ9BXM0 1461 aa14.96□□□□□ -0.02
ZNF540-203ENST00000586134 DISP1Q96F81 1524 aa14.94□□□□□ -0.02
ZNF540-203ENST00000586134 PTPRGP23470 1445 aa14.93□□□□□ -0.02
ZNF540-203ENST00000586134 UHRF1BP1LA0JNW5 1464 aa14.93□□□□□ -0.02
ZNF540-203ENST00000586134 DAXXQ9UER7 740 aaPredicted RBP14.93□□□□□ -0.02
ZNF540-203ENST00000586134 EEA1Q15075 1411 aa14.92□□□□□ -0.02
ZNF540-203ENST00000586134 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
ZNF540-203ENST00000586134 KIAA0556O60303 1618 aa14.91□□□□□ -0.02
ZNF540-203ENST00000586134 ABCC10Q5T3U5 1492 aa14.91□□□□□ -0.02
ZNF540-203ENST00000586134 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
ZNF540-203ENST00000586134 DIP2BQ9P265 1576 aa14.89□□□□□ -0.03
ZNF540-203ENST00000586134 ABCC2Q92887 1545 aa14.88□□□□□ -0.03
ZNF540-203ENST00000586134 GOLGA3Q08378 1498 aa14.88□□□□□ -0.03
ZNF540-203ENST00000586134 UACAQ9BZF9 1416 aa14.86□□□□□ -0.03
ZNF540-203ENST00000586134 KDM5BQ9UGL1 1544 aa14.83□□□□□ -0.04
ZNF540-203ENST00000586134 GLI2P10070 1586 aa14.82□□□□□ -0.04
ZNF540-203ENST00000586134 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
ZNF540-203ENST00000586134 CLSPNQ9HAW4 1339 aa14.8□□□□□ -0.04
ZNF540-203ENST00000586134 ZCCHC11Q5TAX3 1644 aaKnown RBP14.78□□□□□ -0.04
ZNF540-203ENST00000586134 FAM69CQ0P6D2 419 aa14.78□□□□□ -0.04
ZNF540-203ENST00000586134 ABCA8O94911 1581 aa14.78□□□□□ -0.04
ZNF540-203ENST00000586134 KIF21BO75037 1637 aa14.77□□□□□ -0.04
ZNF540-203ENST00000586134 SAMD9Q5K651 1589 aa14.77□□□□□ -0.05
ZNF540-203ENST00000586134 ASXL2Q76L83 1435 aa14.77□□□□□ -0.05
ZNF540-203ENST00000586134 EIF5BO60841 1220 aaKnown RBP14.75□□□□□ -0.05
ZNF540-203ENST00000586134 UBE2Q2Q8WVN8 375 aa14.73□□□□□ -0.05
ZNF540-203ENST00000586134 MAP3K4Q9Y6R4 1608 aa14.72□□□□□ -0.05
ZNF540-203ENST00000586134 TSPOAP1O95153 1857 aa14.72□□□□□ -0.05
ZNF540-203ENST00000586134 PPRC1Q5VV67 1664 aaKnown RBP14.71□□□□□ -0.05
ZNF540-203ENST00000586134 CHIC1Q5VXU3 224 aa14.71□□□□□ -0.05
ZNF540-203ENST00000586134 EPRSP07814 1512 aaKnown RBP14.71□□□□□ -0.05
ZNF540-203ENST00000586134 KDM6BO15054 1643 aa14.69□□□□□ -0.06
ZNF540-203ENST00000586134 WDR7Q9Y4E6 1490 aa14.68□□□□□ -0.06
ZNF540-203ENST00000586134 EFCAB5A4FU69 1503 aa14.67□□□□□ -0.06
ZNF540-203ENST00000586134 CFAP43Q8NDM7 1665 aa14.67□□□□□ -0.06
ZNF540-203ENST00000586134 DIEXFQ68CQ4 756 aaKnown RBP14.66□□□□□ -0.06
ZNF540-203ENST00000586134 TEX14Q8IWB6 1497 aa14.65□□□□□ -0.06
ZNF540-203ENST00000586134 RAPGEF6Q8TEU7 1601 aa14.64□□□□□ -0.07
ZNF540-203ENST00000586134 MYT1LQ9UL68 1186 aa14.63□□□□□ -0.07
ZNF540-203ENST00000586134 MAGI3Q5TCQ9 1506 aa14.61□□□□□ -0.07
ZNF540-203ENST00000586134 TSHZ2Q9NRE2 1034 aa14.6□□□□□ -0.07
ZNF540-203ENST00000586134 ATP10BO94823 1461 aa14.6□□□□□ -0.07
ZNF540-203ENST00000586134 ABCA9Q8IUA7 1624 aa14.56□□□□□ -0.08
ZNF540-203ENST00000586134 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
ZNF540-203ENST00000586134 ERICH6BQ5W0A0 696 aa14.54□□□□□ -0.08
ZNF540-203ENST00000586134 FHOD3Q2V2M9 1422 aa14.54□□□□□ -0.08
ZNF540-203ENST00000586134 CD109Q6YHK3 1445 aa14.54□□□□□ -0.08
ZNF540-203ENST00000586134 ANO8Q9HCE9 1232 aaPredicted RBP14.54□□□□□ -0.08
ZNF540-203ENST00000586134 P3H3Q8IVL6 736 aa14.53□□□□□ -0.08
ZNF540-203ENST00000586134 PHLDB1Q86UU1 1377 aa14.52□□□□□ -0.09
ZNF540-203ENST00000586134 COL17A1Q9UMD9 1497 aaPredicted RBP14.5□□□□□ -0.09
ZNF540-203ENST00000586134 FMN1Q68DA7 1419 aa14.5□□□□□ -0.09
ZNF540-203ENST00000586134 ARAP3Q8WWN8 1544 aa14.49□□□□□ -0.09
ZNF540-203ENST00000586134 ARHGAP35Q9NRY4 1499 aa14.48□□□□□ -0.09
ZNF540-203ENST00000586134 HECW1Q76N89 1606 aa14.47□□□□□ -0.09
ZNF540-203ENST00000586134 NEO1Q92859 1461 aa14.47□□□□□ -0.09
ZNF540-203ENST00000586134 UBTFP17480 764 aaKnown RBP14.46□□□□□ -0.1
ZNF540-203ENST00000586134 KCNH8Q96L42 1107 aa14.46□□□□□ -0.1
ZNF540-203ENST00000586134 CFAP74Q9C0B2 1584 aa14.44□□□□□ -0.1
ZNF540-203ENST00000586134 PLEKHD1A6NEE1 506 aa14.42□□□□□ -0.1
ZNF540-203ENST00000586134 SUPT16HQ9Y5B9 1047 aaKnown RBP14.4□□□□□ -0.1
ZNF540-203ENST00000586134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
ZNF540-203ENST00000586134 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
ZNF540-203ENST00000586134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
ZNF540-203ENST00000586134 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
ZNF540-203ENST00000586134 CDK13Q14004 1512 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms