RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 JPH4Q96JJ6 628 aa36.6■■■■□ 3.45
R3HDM4-202ENST00000586080 PRG4Q92954 1404 aaPredicted RBP36.56■■■■□ 3.44
R3HDM4-202ENST00000586080 KIAA0586Q9BVV6 1533 aa36.55■■■■□ 3.44
R3HDM4-202ENST00000586080 RAPGEF2Q9Y4G8 1499 aa36.51■■■■□ 3.44
R3HDM4-202ENST00000586080 CHIC1Q5VXU3 224 aa36.37■■■■□ 3.41
R3HDM4-202ENST00000586080 IQGAP2Q13576 1575 aa36.33■■■■□ 3.41
R3HDM4-202ENST00000586080 PRXQ9BXM0 1461 aa36.32■■■■□ 3.41
R3HDM4-202ENST00000586080 CSRNP3Q8WYN3 585 aa36.29■■■■□ 3.4
R3HDM4-202ENST00000586080 EEA1Q15075 1411 aa36.26■■■■□ 3.4
R3HDM4-202ENST00000586080 FAM9AQ8IZU1 332 aaPredicted RBP36.25■■■■□ 3.39
R3HDM4-202ENST00000586080 TRHP20396 242 aaPredicted RBP36.24■■■■□ 3.39
R3HDM4-202ENST00000586080 CARMIL2Q6F5E8 1435 aa36.21■■■■□ 3.39
R3HDM4-202ENST00000586080 TTBK1Q5TCY1 1321 aaPredicted RBP36.18■■■■□ 3.38
R3HDM4-202ENST00000586080 PTPRGP23470 1445 aa36.1■■■■□ 3.37
R3HDM4-202ENST00000586080 UGGT2Q9NYU1 1516 aa36.1■■■■□ 3.37
R3HDM4-202ENST00000586080 TNIKQ9UKE5 1360 aa36.1■■■■□ 3.37
R3HDM4-202ENST00000586080 CTTNBP2Q8WZ74 1663 aa36.1■■■■□ 3.37
R3HDM4-202ENST00000586080 DISP1Q96F81 1524 aa36.08■■■■□ 3.37
R3HDM4-202ENST00000586080 KIAA0556O60303 1618 aa35.98■■■■□ 3.35
R3HDM4-202ENST00000586080 NPM1P06748 294 aaKnown RBP eCLIP35.98■■■■□ 3.35
R3HDM4-202ENST00000586080 ADCY10Q96PN6 1610 aa35.97■■■■□ 3.35
R3HDM4-202ENST00000586080 GOLGA3Q08378 1498 aa35.92■■■■□ 3.34
R3HDM4-202ENST00000586080 KIF21BO75037 1637 aa35.87■■■■□ 3.33
R3HDM4-202ENST00000586080 EHMT2Q96KQ7 1210 aa35.87■■■■□ 3.33
R3HDM4-202ENST00000586080 UACAQ9BZF9 1416 aa35.84■■■■□ 3.33
R3HDM4-202ENST00000586080 RANGAP1P46060 587 aaPredicted RBP35.8■■■■□ 3.32
R3HDM4-202ENST00000586080 P3H3Q8IVL6 736 aa35.78■■■■□ 3.32
R3HDM4-202ENST00000586080 ABCC2Q92887 1545 aa35.77■■■■□ 3.32
R3HDM4-202ENST00000586080 UHRF1BP1LA0JNW5 1464 aa35.76■■■■□ 3.32
R3HDM4-202ENST00000586080 MAPKBP1O60336 1514 aa35.76■■■■□ 3.31
R3HDM4-202ENST00000586080 UBTFP17480 764 aaKnown RBP35.72■■■■□ 3.31
R3HDM4-202ENST00000586080 PLB1Q6P1J6 1458 aa35.69■■■■□ 3.3
R3HDM4-202ENST00000586080 FAM69CQ0P6D2 419 aa35.66■■■■□ 3.3
R3HDM4-202ENST00000586080 SAMD9Q5K651 1589 aa35.65■■■■□ 3.3
R3HDM4-202ENST00000586080 ABCC10Q5T3U5 1492 aa35.65■■■■□ 3.3
R3HDM4-202ENST00000586080 KDM5BQ9UGL1 1544 aa35.6■■■■□ 3.29
R3HDM4-202ENST00000586080 ASXL2Q76L83 1435 aa35.59■■■■□ 3.29
R3HDM4-202ENST00000586080 ABCA8O94911 1581 aa35.59■■■■□ 3.29
R3HDM4-202ENST00000586080 DIP2BQ9P265 1576 aa35.58■■■■□ 3.29
R3HDM4-202ENST00000586080 KIF13AQ9H1H9 1805 aa35.57■■■■□ 3.28
R3HDM4-202ENST00000586080 FHOD3Q2V2M9 1422 aa35.56■■■■□ 3.28
R3HDM4-202ENST00000586080 ZCCHC11Q5TAX3 1644 aaKnown RBP35.54■■■■□ 3.28
R3HDM4-202ENST00000586080 EFCAB5A4FU69 1503 aa35.5■■■■□ 3.27
R3HDM4-202ENST00000586080 ARID3CA6NKF2 412 aa35.47■■■■□ 3.27
R3HDM4-202ENST00000586080 WDR7Q9Y4E6 1490 aa35.38■■■■□ 3.25
R3HDM4-202ENST00000586080 RAPGEF6Q8TEU7 1601 aa35.38■■■■□ 3.25
R3HDM4-202ENST00000586080 EPRSP07814 1512 aaKnown RBP35.36■■■■□ 3.25
R3HDM4-202ENST00000586080 GLI2P10070 1586 aa35.31■■■■□ 3.24
R3HDM4-202ENST00000586080 ATP10BO94823 1461 aa35.31■■■■□ 3.24
R3HDM4-202ENST00000586080 ARHGAP35Q9NRY4 1499 aa35.31■■■■□ 3.24
R3HDM4-202ENST00000586080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.29■■■■□ 3.24
R3HDM4-202ENST00000586080 HNRNPUL2Q1KMD3 747 aaKnown RBP35.29■■■■□ 3.24
R3HDM4-202ENST00000586080 KCNH8Q96L42 1107 aa35.27■■■■□ 3.24
R3HDM4-202ENST00000586080 NUP153P49790 1475 aaKnown RBP35.27■■■■□ 3.24
R3HDM4-202ENST00000586080 TSPOAP1O95153 1857 aa35.26■■■■□ 3.23
R3HDM4-202ENST00000586080 FMN1Q68DA7 1419 aa35.2■■■■□ 3.23
R3HDM4-202ENST00000586080 ATP1B4Q9UN42 357 aaPredicted RBP35.17■■■■□ 3.22
R3HDM4-202ENST00000586080 MAP3K4Q9Y6R4 1608 aa35.14■■■■□ 3.22
R3HDM4-202ENST00000586080 CLIP1P30622 1438 aa35.09■■■■□ 3.21
R3HDM4-202ENST00000586080 PPRC1Q5VV67 1664 aaKnown RBP35.09■■■■□ 3.21
R3HDM4-202ENST00000586080 CD109Q6YHK3 1445 aa35.08■■■■□ 3.21
R3HDM4-202ENST00000586080 KDM6BO15054 1643 aa35.08■■■■□ 3.21
R3HDM4-202ENST00000586080 TEX14Q8IWB6 1497 aa35.07■■■■□ 3.2
R3HDM4-202ENST00000586080 HECW1Q76N89 1606 aa35.05■■■■□ 3.2
R3HDM4-202ENST00000586080 CDK13Q14004 1512 aaKnown RBP35.05■■■■□ 3.2
R3HDM4-202ENST00000586080 PLEKHD1A6NEE1 506 aa35.04■■■■□ 3.2
R3HDM4-202ENST00000586080 CFAP43Q8NDM7 1665 aa35.01■■■■□ 3.2
R3HDM4-202ENST00000586080 MAGI3Q5TCQ9 1506 aa34.96■■■■□ 3.19
R3HDM4-202ENST00000586080 LOC105371045A0A1W2PR82 267 aa34.92■■■■□ 3.18
R3HDM4-202ENST00000586080 ABCA9Q8IUA7 1624 aa34.92■■■■□ 3.18
R3HDM4-202ENST00000586080 PCF11O94913 1555 aaKnown RBP34.91■■■■□ 3.18
R3HDM4-202ENST00000586080 CEP162Q5TB80 1403 aa34.89■■■■□ 3.18
R3HDM4-202ENST00000586080 CASKIN1Q8WXD9 1431 aa34.89■■■■□ 3.18
R3HDM4-202ENST00000586080 CDK11AQ9UQ88 783 aaPredicted RBP34.87■■■■□ 3.17
R3HDM4-202ENST00000586080 COL17A1Q9UMD9 1497 aaPredicted RBP34.85■■■■□ 3.17
R3HDM4-202ENST00000586080 FYCO1Q9BQS8 1478 aa34.81■■■■□ 3.16
R3HDM4-202ENST00000586080 CCDC18Q5T9S5 1454 aa34.78■■■■□ 3.16
R3HDM4-202ENST00000586080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.77■■■■□ 3.16
R3HDM4-202ENST00000586080 LRRIQ1Q96JM4 1722 aa34.74■■■■□ 3.15
R3HDM4-202ENST00000586080 TTC37Q6PGP7 1564 aa34.74■■■■□ 3.15
R3HDM4-202ENST00000586080 TROQ12816 1431 aaPredicted RBP34.73■■■■□ 3.15
R3HDM4-202ENST00000586080 NEO1Q92859 1461 aa34.69■■■■□ 3.14
R3HDM4-202ENST00000586080 PHLDB1Q86UU1 1377 aa34.68■■■■□ 3.14
R3HDM4-202ENST00000586080 KIF14Q15058 1648 aa34.66■■■■□ 3.14
R3HDM4-202ENST00000586080 ARAP3Q8WWN8 1544 aa34.65■■■■□ 3.14
R3HDM4-202ENST00000586080 FANCAO15360 1455 aa34.63■■■■□ 3.13
R3HDM4-202ENST00000586080 PLCH2O75038 1416 aa34.57■■■■□ 3.13
R3HDM4-202ENST00000586080 AKNAQ7Z591 1439 aa34.57■■■■□ 3.13
R3HDM4-202ENST00000586080 RAPGEF3O95398 923 aa34.56■■■■□ 3.12
R3HDM4-202ENST00000586080 CFAP74Q9C0B2 1584 aa34.56■■■■□ 3.12
R3HDM4-202ENST00000586080 AEBP2Q6ZN18 517 aaPredicted RBP34.54■■■■□ 3.12
R3HDM4-202ENST00000586080 MYO5CQ9NQX4 1742 aa34.5■■■■□ 3.11
R3HDM4-202ENST00000586080 EFCAB2Q5VUJ9 269 aa34.49■■■■□ 3.11
R3HDM4-202ENST00000586080 DENND4BO75064 1496 aaPredicted RBP34.49■■■■□ 3.11
R3HDM4-202ENST00000586080 MTUS2Q5JR59 1369 aa34.48■■■■□ 3.11
R3HDM4-202ENST00000586080 ARHGAP5Q13017 1502 aa34.47■■■■□ 3.11
R3HDM4-202ENST00000586080 VPS8Q8N3P4 1428 aa34.47■■■■□ 3.11
R3HDM4-202ENST00000586080 ADGRL1O94910 1474 aa34.46■■■■□ 3.11
R3HDM4-202ENST00000586080 FRMPD1Q5SYB0 1578 aa34.44■■■■□ 3.1
R3HDM4-202ENST00000586080 SCAPERQ9BY12 1400 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms