RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 RAPGEF2Q9Y4G8 1499 aa19.59■□□□□ 0.73
LRFN3-202ENST00000585876 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
LRFN3-202ENST00000585876 CTTNBP2Q8WZ74 1663 aa19.54■□□□□ 0.72
LRFN3-202ENST00000585876 IQGAP2Q13576 1575 aa19.5■□□□□ 0.71
LRFN3-202ENST00000585876 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
LRFN3-202ENST00000585876 KIF21BO75037 1637 aa19.49■□□□□ 0.71
LRFN3-202ENST00000585876 ERCC6L2Q5T890 1561 aa19.48■□□□□ 0.71
LRFN3-202ENST00000585876 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
LRFN3-202ENST00000585876 PRG4Q92954 1404 aaPredicted RBP19.41■□□□□ 0.7
LRFN3-202ENST00000585876 UGGT2Q9NYU1 1516 aa19.41■□□□□ 0.7
LRFN3-202ENST00000585876 JPH4Q96JJ6 628 aa19.39■□□□□ 0.69
LRFN3-202ENST00000585876 DISP1Q96F81 1524 aa19.33■□□□□ 0.68
LRFN3-202ENST00000585876 KIAA0556O60303 1618 aa19.33■□□□□ 0.68
LRFN3-202ENST00000585876 CARMIL2Q6F5E8 1435 aa19.29■□□□□ 0.68
LRFN3-202ENST00000585876 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
LRFN3-202ENST00000585876 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
LRFN3-202ENST00000585876 FAM9AQ8IZU1 332 aaPredicted RBP19.28■□□□□ 0.68
LRFN3-202ENST00000585876 SAMD9Q5K651 1589 aa19.27■□□□□ 0.68
LRFN3-202ENST00000585876 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
LRFN3-202ENST00000585876 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
LRFN3-202ENST00000585876 EFCAB5A4FU69 1503 aa19.18■□□□□ 0.66
LRFN3-202ENST00000585876 PTPRGP23470 1445 aa19.17■□□□□ 0.66
LRFN3-202ENST00000585876 UHRF1BP1LA0JNW5 1464 aa19.15■□□□□ 0.66
LRFN3-202ENST00000585876 ABCC2Q92887 1545 aa19.13■□□□□ 0.65
LRFN3-202ENST00000585876 ABCA8O94911 1581 aa19.1■□□□□ 0.65
LRFN3-202ENST00000585876 MAPKBP1O60336 1514 aa19.1■□□□□ 0.65
LRFN3-202ENST00000585876 UACAQ9BZF9 1416 aa19.08■□□□□ 0.65
LRFN3-202ENST00000585876 KDM5BQ9UGL1 1544 aa19.05■□□□□ 0.64
LRFN3-202ENST00000585876 UBTFP17480 764 aaKnown RBP19.04■□□□□ 0.64
LRFN3-202ENST00000585876 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
LRFN3-202ENST00000585876 ZCCHC11Q5TAX3 1644 aaKnown RBP19.03■□□□□ 0.64
LRFN3-202ENST00000585876 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
LRFN3-202ENST00000585876 RAPGEF6Q8TEU7 1601 aa19.02■□□□□ 0.64
LRFN3-202ENST00000585876 KIF13AQ9H1H9 1805 aa19.02■□□□□ 0.63
LRFN3-202ENST00000585876 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
LRFN3-202ENST00000585876 DIP2BQ9P265 1576 aa18.96■□□□□ 0.63
LRFN3-202ENST00000585876 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
LRFN3-202ENST00000585876 TTBK1Q5TCY1 1321 aaPredicted RBP18.94■□□□□ 0.62
LRFN3-202ENST00000585876 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
LRFN3-202ENST00000585876 NPM1P06748 294 aaKnown RBP eCLIP18.92■□□□□ 0.62
LRFN3-202ENST00000585876 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
LRFN3-202ENST00000585876 NUP153P49790 1475 aaKnown RBP18.91■□□□□ 0.62
LRFN3-202ENST00000585876 ABCC10Q5T3U5 1492 aa18.91■□□□□ 0.62
LRFN3-202ENST00000585876 CLIP1P30622 1438 aa18.9■□□□□ 0.62
LRFN3-202ENST00000585876 ASXL2Q76L83 1435 aa18.9■□□□□ 0.62
LRFN3-202ENST00000585876 HECW1Q76N89 1606 aa18.89■□□□□ 0.61
LRFN3-202ENST00000585876 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
LRFN3-202ENST00000585876 GLI2P10070 1586 aa18.88■□□□□ 0.61
LRFN3-202ENST00000585876 ATP10BO94823 1461 aa18.86■□□□□ 0.61
LRFN3-202ENST00000585876 WDR7Q9Y4E6 1490 aa18.86■□□□□ 0.61
LRFN3-202ENST00000585876 LRRIQ1Q96JM4 1722 aa18.86■□□□□ 0.61
LRFN3-202ENST00000585876 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
LRFN3-202ENST00000585876 PCF11O94913 1555 aaKnown RBP18.84■□□□□ 0.61
LRFN3-202ENST00000585876 MAP3K4Q9Y6R4 1608 aa18.82■□□□□ 0.6
LRFN3-202ENST00000585876 EPRSP07814 1512 aaKnown RBP18.82■□□□□ 0.6
LRFN3-202ENST00000585876 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
LRFN3-202ENST00000585876 FYCO1Q9BQS8 1478 aa18.8■□□□□ 0.6
LRFN3-202ENST00000585876 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
LRFN3-202ENST00000585876 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
LRFN3-202ENST00000585876 PPRC1Q5VV67 1664 aaKnown RBP18.78■□□□□ 0.6
LRFN3-202ENST00000585876 CDK13Q14004 1512 aaKnown RBP18.76■□□□□ 0.59
LRFN3-202ENST00000585876 ABCA9Q8IUA7 1624 aa18.75■□□□□ 0.59
LRFN3-202ENST00000585876 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
LRFN3-202ENST00000585876 TSPOAP1O95153 1857 aa18.74■□□□□ 0.59
LRFN3-202ENST00000585876 CCDC18Q5T9S5 1454 aa18.74■□□□□ 0.59
LRFN3-202ENST00000585876 FAM69CQ0P6D2 419 aa18.72■□□□□ 0.59
LRFN3-202ENST00000585876 MAGI3Q5TCQ9 1506 aa18.66■□□□□ 0.58
LRFN3-202ENST00000585876 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
LRFN3-202ENST00000585876 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
LRFN3-202ENST00000585876 TEX14Q8IWB6 1497 aa18.64■□□□□ 0.57
LRFN3-202ENST00000585876 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.57
LRFN3-202ENST00000585876 KIF14Q15058 1648 aa18.63■□□□□ 0.57
LRFN3-202ENST00000585876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.63■□□□□ 0.57
LRFN3-202ENST00000585876 TROQ12816 1431 aaPredicted RBP18.62■□□□□ 0.57
LRFN3-202ENST00000585876 CD109Q6YHK3 1445 aa18.6■□□□□ 0.57
LRFN3-202ENST00000585876 PLEKHD1A6NEE1 506 aa18.6■□□□□ 0.57
LRFN3-202ENST00000585876 MYO5CQ9NQX4 1742 aa18.6■□□□□ 0.57
LRFN3-202ENST00000585876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
LRFN3-202ENST00000585876 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
LRFN3-202ENST00000585876 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.56
LRFN3-202ENST00000585876 KDM6BO15054 1643 aa18.58■□□□□ 0.56
LRFN3-202ENST00000585876 CFAP74Q9C0B2 1584 aa18.57■□□□□ 0.56
LRFN3-202ENST00000585876 KCNH8Q96L42 1107 aa18.57■□□□□ 0.56
LRFN3-202ENST00000585876 ARAP3Q8WWN8 1544 aa18.57■□□□□ 0.56
LRFN3-202ENST00000585876 TIAM1Q13009 1591 aa18.56■□□□□ 0.56
LRFN3-202ENST00000585876 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
LRFN3-202ENST00000585876 ATP1B4Q9UN42 357 aaPredicted RBP18.55■□□□□ 0.56
LRFN3-202ENST00000585876 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
LRFN3-202ENST00000585876 NEO1Q92859 1461 aa18.53■□□□□ 0.56
LRFN3-202ENST00000585876 PREX2Q70Z35 1606 aa18.52■□□□□ 0.56
LRFN3-202ENST00000585876 CDC42BPAQ5VT25 1732 aa18.52■□□□□ 0.55
LRFN3-202ENST00000585876 CDC42BPBQ9Y5S2 1711 aa18.51■□□□□ 0.55
LRFN3-202ENST00000585876 PHLDB1Q86UU1 1377 aa18.5■□□□□ 0.55
LRFN3-202ENST00000585876 PLCH2O75038 1416 aa18.48■□□□□ 0.55
LRFN3-202ENST00000585876 FANCAO15360 1455 aa18.46■□□□□ 0.55
LRFN3-202ENST00000585876 COL17A1Q9UMD9 1497 aaPredicted RBP18.46■□□□□ 0.55
LRFN3-202ENST00000585876 SUPT6HQ7KZ85 1726 aaKnown RBP18.46■□□□□ 0.55
LRFN3-202ENST00000585876 ITSN2Q9NZM3 1697 aa18.44■□□□□ 0.54
LRFN3-202ENST00000585876 RICTORQ6R327 1708 aa18.44■□□□□ 0.54
LRFN3-202ENST00000585876 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms