RNA–Protein interactions for RNA: ENST00000585854.1

CHAF1A-203, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 2

Gene CHAF1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-203ENST00000585854 CUL7Q14999 1698 aa35.6■■■■□ 3.29
CHAF1A-203ENST00000585854 IGF1RP08069 1367 aa35.6■■■■□ 3.29
CHAF1A-203ENST00000585854 KIF13AQ9H1H9 1805 aa35.58■■■■□ 3.29
CHAF1A-203ENST00000585854 AEBP2Q6ZN18 517 aaPredicted RBP35.53■■■■□ 3.28
CHAF1A-203ENST00000585854 KIAA0586Q9BVV6 1533 aa35.52■■■■□ 3.28
CHAF1A-203ENST00000585854 NPM1P06748 294 aaKnown RBP eCLIP35.49■■■■□ 3.27
CHAF1A-203ENST00000585854 ADCY10Q96PN6 1610 aa35.43■■■■□ 3.26
CHAF1A-203ENST00000585854 CARMIL1Q5VZK9 1371 aa35.4■■■■□ 3.26
CHAF1A-203ENST00000585854 FAM69CQ0P6D2 419 aa35.37■■■■□ 3.25
CHAF1A-203ENST00000585854 TTBK1Q5TCY1 1321 aaPredicted RBP35.35■■■■□ 3.25
CHAF1A-203ENST00000585854 MAPKBP1O60336 1514 aa35.33■■■■□ 3.25
CHAF1A-203ENST00000585854 ABCC10Q5T3U5 1492 aa35.33■■■■□ 3.25
CHAF1A-203ENST00000585854 DIP2BQ9P265 1576 aa35.28■■■■□ 3.24
CHAF1A-203ENST00000585854 PTPRGP23470 1445 aa35.24■■■■□ 3.23
CHAF1A-203ENST00000585854 IQGAP2Q13576 1575 aa35.22■■■■□ 3.23
CHAF1A-203ENST00000585854 CARMIL2Q6F5E8 1435 aa35.22■■■■□ 3.23
CHAF1A-203ENST00000585854 TSPOAP1O95153 1857 aa35.2■■■■□ 3.23
CHAF1A-203ENST00000585854 TNIKQ9UKE5 1360 aa35.16■■■■□ 3.22
CHAF1A-203ENST00000585854 RAPGEF2Q9Y4G8 1499 aa35.08■■■■□ 3.21
CHAF1A-203ENST00000585854 KDM6BO15054 1643 aa35.04■■■■□ 3.2
CHAF1A-203ENST00000585854 ABCC2Q92887 1545 aa35.04■■■■□ 3.2
CHAF1A-203ENST00000585854 DISP1Q96F81 1524 aa35.01■■■■□ 3.19
CHAF1A-203ENST00000585854 ASXL2Q76L83 1435 aa34.96■■■■□ 3.19
CHAF1A-203ENST00000585854 UACAQ9BZF9 1416 aa34.96■■■■□ 3.19
CHAF1A-203ENST00000585854 UGGT2Q9NYU1 1516 aa34.94■■■■□ 3.18
CHAF1A-203ENST00000585854 UHRF1BP1LA0JNW5 1464 aa34.93■■■■□ 3.18
CHAF1A-203ENST00000585854 PLB1Q6P1J6 1458 aa34.91■■■■□ 3.18
CHAF1A-203ENST00000585854 KIAA0556O60303 1618 aa34.9■■■■□ 3.18
CHAF1A-203ENST00000585854 CTTNBP2Q8WZ74 1663 aa34.89■■■■□ 3.18
CHAF1A-203ENST00000585854 GLI2P10070 1586 aa34.82■■■■□ 3.16
CHAF1A-203ENST00000585854 ZCCHC11Q5TAX3 1644 aaKnown RBP34.81■■■■□ 3.16
CHAF1A-203ENST00000585854 PPRC1Q5VV67 1664 aaKnown RBP34.81■■■■□ 3.16
CHAF1A-203ENST00000585854 KDM5BQ9UGL1 1544 aa34.79■■■■□ 3.16
CHAF1A-203ENST00000585854 EPRSP07814 1512 aaKnown RBP34.72■■■■□ 3.15
CHAF1A-203ENST00000585854 GOLGA3Q08378 1498 aa34.69■■■■□ 3.14
CHAF1A-203ENST00000585854 MAP3K4Q9Y6R4 1608 aa34.67■■■■□ 3.14
CHAF1A-203ENST00000585854 KDM4FA0A1W2PPD8 638 aa34.65■■■■□ 3.14
CHAF1A-203ENST00000585854 PRXQ9BXM0 1461 aa34.65■■■■□ 3.14
CHAF1A-203ENST00000585854 WDR7Q9Y4E6 1490 aa34.58■■■■□ 3.13
CHAF1A-203ENST00000585854 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
CHAF1A-203ENST00000585854 ABCA8O94911 1581 aa34.56■■■■□ 3.12
CHAF1A-203ENST00000585854 COL17A1Q9UMD9 1497 aaPredicted RBP34.52■■■■□ 3.12
CHAF1A-203ENST00000585854 KCNH8Q96L42 1107 aa34.51■■■■□ 3.12
CHAF1A-203ENST00000585854 P3H3Q8IVL6 736 aa34.49■■■■□ 3.11
CHAF1A-203ENST00000585854 FAM9AQ8IZU1 332 aaPredicted RBP34.44■■■■□ 3.1
CHAF1A-203ENST00000585854 ARID3CA6NKF2 412 aa34.43■■■■□ 3.1
CHAF1A-203ENST00000585854 CFAP43Q8NDM7 1665 aa34.43■■■■□ 3.1
CHAF1A-203ENST00000585854 CSRNP3Q8WYN3 585 aa34.42■■■■□ 3.1
CHAF1A-203ENST00000585854 CD109Q6YHK3 1445 aa34.41■■■■□ 3.1
CHAF1A-203ENST00000585854 ADGRL1O94910 1474 aa34.4■■■■□ 3.1
CHAF1A-203ENST00000585854 MAGI3Q5TCQ9 1506 aa34.33■■■■□ 3.09
CHAF1A-203ENST00000585854 SAMD9Q5K651 1589 aa34.29■■■■□ 3.08
CHAF1A-203ENST00000585854 RANGAP1P46060 587 aaPredicted RBP34.29■■■■□ 3.08
CHAF1A-203ENST00000585854 ATP10BO94823 1461 aa34.27■■■■□ 3.08
CHAF1A-203ENST00000585854 RAPGEF6Q8TEU7 1601 aa34.23■■■■□ 3.07
CHAF1A-203ENST00000585854 EEA1Q15075 1411 aa34.21■■■■□ 3.07
CHAF1A-203ENST00000585854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.2■■■■□ 3.07
CHAF1A-203ENST00000585854 HNRNPUL2Q1KMD3 747 aaKnown RBP34.2■■■■□ 3.07
CHAF1A-203ENST00000585854 ABCA9Q8IUA7 1624 aa34.12■■■■□ 3.05
CHAF1A-203ENST00000585854 FHOD3Q2V2M9 1422 aa34.11■■■■□ 3.05
CHAF1A-203ENST00000585854 KIF21BO75037 1637 aa34.09■■■■□ 3.05
CHAF1A-203ENST00000585854 ARAP3Q8WWN8 1544 aa34.06■■■■□ 3.04
CHAF1A-203ENST00000585854 NUP153P49790 1475 aaKnown RBP34.04■■■■□ 3.04
CHAF1A-203ENST00000585854 EHMT2Q96KQ7 1210 aa33.97■■■■□ 3.03
CHAF1A-203ENST00000585854 HECW2Q9P2P5 1572 aa33.97■■■■□ 3.03
CHAF1A-203ENST00000585854 PHLDB1Q86UU1 1377 aa33.97■■■■□ 3.03
CHAF1A-203ENST00000585854 RAPGEF3O95398 923 aa33.94■■■■□ 3.02
CHAF1A-203ENST00000585854 EFCAB5A4FU69 1503 aa33.93■■■■□ 3.02
CHAF1A-203ENST00000585854 PLEKHD1A6NEE1 506 aa33.92■■■■□ 3.02
CHAF1A-203ENST00000585854 NEO1Q92859 1461 aa33.92■■■■□ 3.02
CHAF1A-203ENST00000585854 UBTFP17480 764 aaKnown RBP33.83■■■■□ 3.01
CHAF1A-203ENST00000585854 FRMPD1Q5SYB0 1578 aa33.82■■■■□ 3
CHAF1A-203ENST00000585854 CDK13Q14004 1512 aaKnown RBP33.77■■■■□ 3
CHAF1A-203ENST00000585854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.77■■■■□ 31e-6■■■■■ 42.9
CHAF1A-203ENST00000585854 ARID4BQ4LE39 1312 aaPredicted RBP33.77■■■■□ 3
CHAF1A-203ENST00000585854 ATP1B4Q9UN42 357 aaPredicted RBP33.76■■■□□ 2.99
CHAF1A-203ENST00000585854 TTC37Q6PGP7 1564 aa33.75■■■□□ 2.99
CHAF1A-203ENST00000585854 ADAMTSL3P82987 1691 aa33.74■■■□□ 2.99
CHAF1A-203ENST00000585854 CFAP74Q9C0B2 1584 aa33.74■■■□□ 2.99
CHAF1A-203ENST00000585854 AKNAQ7Z591 1439 aa33.73■■■□□ 2.99
CHAF1A-203ENST00000585854 FANCAO15360 1455 aa33.73■■■□□ 2.99
CHAF1A-203ENST00000585854 DENND4BO75064 1496 aaPredicted RBP33.73■■■□□ 2.99
CHAF1A-203ENST00000585854 ILDR1Q86SU0 546 aaPredicted RBP33.72■■■□□ 2.99
CHAF1A-203ENST00000585854 RICTORQ6R327 1708 aa33.72■■■□□ 2.99
CHAF1A-203ENST00000585854 CHIC1Q5VXU3 224 aa33.71■■■□□ 2.99
CHAF1A-203ENST00000585854 BCORL1Q5H9F3 1711 aa33.7■■■□□ 2.98
CHAF1A-203ENST00000585854 PTPRMP28827 1452 aa33.67■■■□□ 2.98
CHAF1A-203ENST00000585854 ARHGEF40Q8TER5 1519 aa33.66■■■□□ 2.98
CHAF1A-203ENST00000585854 HECW1Q76N89 1606 aa33.64■■■□□ 2.98
CHAF1A-203ENST00000585854 MADDQ8WXG6 1647 aa33.64■■■□□ 2.98
CHAF1A-203ENST00000585854 FMN1Q68DA7 1419 aa33.63■■■□□ 2.97
CHAF1A-203ENST00000585854 ARHGAP35Q9NRY4 1499 aa33.63■■■□□ 2.97
CHAF1A-203ENST00000585854 RIMS1Q86UR5 1692 aaKnown RBP33.55■■■□□ 2.96
CHAF1A-203ENST00000585854 ZFYVE16Q7Z3T8 1539 aa33.54■■■□□ 2.96
CHAF1A-203ENST00000585854 MYO5CQ9NQX4 1742 aa33.54■■■□□ 2.96
CHAF1A-203ENST00000585854 ZMYM4Q5VZL5 1548 aa33.53■■■□□ 2.96
CHAF1A-203ENST00000585854 PLCH2O75038 1416 aa33.53■■■□□ 2.96
CHAF1A-203ENST00000585854 CDK11AQ9UQ88 783 aaPredicted RBP33.52■■■□□ 2.96
CHAF1A-203ENST00000585854 SCAPERQ9BY12 1400 aa33.51■■■□□ 2.95
CHAF1A-203ENST00000585854 YEATS2Q9ULM3 1422 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms