RNA–Protein interactions for RNA: ENST00000585838.2

POLR2E-202, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-202ENST00000585838 TTBK1Q5TCY1 1321 aaPredicted RBP17.05■□□□□ 0.32
POLR2E-202ENST00000585838 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
POLR2E-202ENST00000585838 CHD1O14646 1710 aa17.01■□□□□ 0.31
POLR2E-202ENST00000585838 CEP170Q5SW79 1584 aa17■□□□□ 0.31
POLR2E-202ENST00000585838 JPH4Q96JJ6 628 aa17■□□□□ 0.31
POLR2E-202ENST00000585838 NUP160Q12769 1436 aa16.97■□□□□ 0.31
POLR2E-202ENST00000585838 CEP162Q5TB80 1403 aa16.96■□□□□ 0.3
POLR2E-202ENST00000585838 KIAA0586Q9BVV6 1533 aa16.95■□□□□ 0.3
POLR2E-202ENST00000585838 CLIP1P30622 1438 aa16.94■□□□□ 0.3
POLR2E-202ENST00000585838 ATP1B4Q9UN42 357 aaPredicted RBP16.88■□□□□ 0.29
POLR2E-202ENST00000585838 IQGAP2Q13576 1575 aa16.88■□□□□ 0.29
POLR2E-202ENST00000585838 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
POLR2E-202ENST00000585838 FHOD3Q2V2M9 1422 aa16.86■□□□□ 0.29
POLR2E-202ENST00000585838 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
POLR2E-202ENST00000585838 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
POLR2E-202ENST00000585838 CLASP1Q7Z460 1538 aa16.83■□□□□ 0.28
POLR2E-202ENST00000585838 ARID3CA6NKF2 412 aa16.82■□□□□ 0.28
POLR2E-202ENST00000585838 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
POLR2E-202ENST00000585838 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
POLR2E-202ENST00000585838 PPARGC1BQ86YN6 1023 aaKnown RBP16.8■□□□□ 0.28
POLR2E-202ENST00000585838 DISP1Q96F81 1524 aa16.8■□□□□ 0.28
POLR2E-202ENST00000585838 UGGT2Q9NYU1 1516 aa16.79■□□□□ 0.28
POLR2E-202ENST00000585838 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
POLR2E-202ENST00000585838 PTPRGP23470 1445 aa16.73■□□□□ 0.27
POLR2E-202ENST00000585838 KIAA0556O60303 1618 aa16.72■□□□□ 0.27
POLR2E-202ENST00000585838 SAMD9Q5K651 1589 aa16.72■□□□□ 0.27
POLR2E-202ENST00000585838 CYB5RLQ6IPT4 315 aa16.71■□□□□ 0.27
POLR2E-202ENST00000585838 EFCAB5A4FU69 1503 aa16.7■□□□□ 0.26
POLR2E-202ENST00000585838 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
POLR2E-202ENST00000585838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
POLR2E-202ENST00000585838 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
POLR2E-202ENST00000585838 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
POLR2E-202ENST00000585838 APLP2Q06481 763 aa16.65■□□□□ 0.26
POLR2E-202ENST00000585838 PLB1Q6P1J6 1458 aa16.65■□□□□ 0.26
POLR2E-202ENST00000585838 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
POLR2E-202ENST00000585838 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
POLR2E-202ENST00000585838 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
POLR2E-202ENST00000585838 KANK4Q5T7N3 995 aaPredicted RBP16.59■□□□□ 0.25
POLR2E-202ENST00000585838 CASKIN1Q8WXD9 1431 aa16.59■□□□□ 0.25
POLR2E-202ENST00000585838 UACAQ9BZF9 1416 aa16.59■□□□□ 0.25
POLR2E-202ENST00000585838 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
POLR2E-202ENST00000585838 RIMBP3BA6NNM3 1639 aa16.58■□□□□ 0.24
POLR2E-202ENST00000585838 RIMBP3Q9UFD9 1639 aa16.58■□□□□ 0.24
POLR2E-202ENST00000585838 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
POLR2E-202ENST00000585838 CDK13Q14004 1512 aaKnown RBP16.52■□□□□ 0.24
POLR2E-202ENST00000585838 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.24
POLR2E-202ENST00000585838 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.23
POLR2E-202ENST00000585838 ABCA8O94911 1581 aa16.51■□□□□ 0.23
POLR2E-202ENST00000585838 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
POLR2E-202ENST00000585838 RAPGEF6Q8TEU7 1601 aa16.51■□□□□ 0.23
POLR2E-202ENST00000585838 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
POLR2E-202ENST00000585838 ATP10BO94823 1461 aa16.49■□□□□ 0.23
POLR2E-202ENST00000585838 PLEKHD1A6NEE1 506 aa16.48■□□□□ 0.23
POLR2E-202ENST00000585838 EPRSP07814 1512 aaKnown RBP16.48■□□□□ 0.23
POLR2E-202ENST00000585838 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
POLR2E-202ENST00000585838 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
POLR2E-202ENST00000585838 CDK11AQ9UQ88 783 aaPredicted RBP16.44■□□□□ 0.22
POLR2E-202ENST00000585838 MTUS2Q5JR59 1369 aa16.43■□□□□ 0.22
POLR2E-202ENST00000585838 ADCY10Q96PN6 1610 aa16.43■□□□□ 0.22
POLR2E-202ENST00000585838 UHRF1BP1LA0JNW5 1464 aa16.42■□□□□ 0.22
POLR2E-202ENST00000585838 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
POLR2E-202ENST00000585838 LRRIQ1Q96JM4 1722 aa16.41■□□□□ 0.22
POLR2E-202ENST00000585838 CCDC18Q5T9S5 1454 aa16.39■□□□□ 0.21
POLR2E-202ENST00000585838 LRRC9Q6ZRR7 1453 aa16.39■□□□□ 0.21
POLR2E-202ENST00000585838 MAGI3Q5TCQ9 1506 aa16.39■□□□□ 0.21
POLR2E-202ENST00000585838 KDM5BQ9UGL1 1544 aa16.37■□□□□ 0.21
POLR2E-202ENST00000585838 ZCCHC11Q5TAX3 1644 aaKnown RBP16.35■□□□□ 0.21
POLR2E-202ENST00000585838 ASXL2Q76L83 1435 aa16.35■□□□□ 0.21
POLR2E-202ENST00000585838 MAP3K1Q13233 1512 aa16.34■□□□□ 0.21
POLR2E-202ENST00000585838 TROQ12816 1431 aaPredicted RBP16.33■□□□□ 0.2
POLR2E-202ENST00000585838 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
POLR2E-202ENST00000585838 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
POLR2E-202ENST00000585838 PHLDB1Q86UU1 1377 aa16.29■□□□□ 0.2
POLR2E-202ENST00000585838 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
POLR2E-202ENST00000585838 NCOA2Q15596 1464 aa16.28■□□□□ 0.2
POLR2E-202ENST00000585838 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
POLR2E-202ENST00000585838 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
POLR2E-202ENST00000585838 EHBP1L1Q8N3D4 1523 aa16.26■□□□□ 0.19
POLR2E-202ENST00000585838 ITGAEP38570 1179 aa16.26■□□□□ 0.19
POLR2E-202ENST00000585838 WDR7Q9Y4E6 1490 aa16.26■□□□□ 0.19
POLR2E-202ENST00000585838 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
POLR2E-202ENST00000585838 KIF14Q15058 1648 aa16.25■□□□□ 0.19
POLR2E-202ENST00000585838 ZNF644Q9H582 1327 aaPredicted RBP16.24■□□□□ 0.19
POLR2E-202ENST00000585838 PCGF6Q9BYE7 350 aa16.23■□□□□ 0.19
POLR2E-202ENST00000585838 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
POLR2E-202ENST00000585838 TRIM26Q12899 539 aaPredicted RBP16.22■□□□□ 0.19
POLR2E-202ENST00000585838 ABCC10Q5T3U5 1492 aa16.19■□□□□ 0.18
POLR2E-202ENST00000585838 SUPT6HQ7KZ85 1726 aaKnown RBP16.19■□□□□ 0.18
POLR2E-202ENST00000585838 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.19■□□□□ 0.18
POLR2E-202ENST00000585838 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
POLR2E-202ENST00000585838 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
POLR2E-202ENST00000585838 MAPKBP1O60336 1514 aa16.16■□□□□ 0.18
POLR2E-202ENST00000585838 HNRNPMP52272 730 aaKnown RBP eCLIP16.16■□□□□ 0.18
POLR2E-202ENST00000585838 EFCAB2Q5VUJ9 269 aa16.15■□□□□ 0.18
POLR2E-202ENST00000585838 TTC37Q6PGP7 1564 aa16.15■□□□□ 0.18
POLR2E-202ENST00000585838 CD109Q6YHK3 1445 aa16.15■□□□□ 0.18
POLR2E-202ENST00000585838 FGD6Q6ZV73 1430 aa16.13■□□□□ 0.17
POLR2E-202ENST00000585838 CHIC2Q9UKJ5 165 aa16.13■□□□□ 0.17
POLR2E-202ENST00000585838 PLCH2O75038 1416 aa16.12■□□□□ 0.17
POLR2E-202ENST00000585838 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms