RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 B4GALNT3Q6L9W6 998 aa20.57■□□□□ 0.88
MBD1-212ENST00000585672 HIRIP3Q9BW71 556 aaPredicted RBP20.57■□□□□ 0.88
MBD1-212ENST00000585672 KIF21BO75037 1637 aa20.57■□□□□ 0.88
MBD1-212ENST00000585672 IPO9Q96P70 1041 aaKnown RBP20.53■□□□□ 0.88
MBD1-212ENST00000585672 RRBP1Q9P2E9 1410 aaKnown RBP20.53■□□□□ 0.88
MBD1-212ENST00000585672 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
MBD1-212ENST00000585672 RANGAP1P46060 587 aaPredicted RBP20.52■□□□□ 0.87
MBD1-212ENST00000585672 WASHC2AQ641Q2 1341 aa20.51■□□□□ 0.87
MBD1-212ENST00000585672 ZBTB47Q9UFB7 747 aaPredicted RBP20.48■□□□□ 0.87
MBD1-212ENST00000585672 ANP32AP39687 249 aaKnown RBP20.46■□□□□ 0.87
MBD1-212ENST00000585672 SIN3AQ96ST3 1273 aa20.46■□□□□ 0.87
MBD1-212ENST00000585672 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
MBD1-212ENST00000585672 RAB3GAP2Q9H2M9 1393 aa20.45■□□□□ 0.86
MBD1-212ENST00000585672 C11orf95C9JLR9 678 aaPredicted RBP20.45■□□□□ 0.86
MBD1-212ENST00000585672 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
MBD1-212ENST00000585672 EIF5BO60841 1220 aaKnown RBP20.43■□□□□ 0.86
MBD1-212ENST00000585672 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
MBD1-212ENST00000585672 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
MBD1-212ENST00000585672 CCNB3Q8WWL7 1395 aa20.4■□□□□ 0.86
MBD1-212ENST00000585672 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
MBD1-212ENST00000585672 PKNOX2Q96KN3 472 aa20.38■□□□□ 0.85
MBD1-212ENST00000585672 BRPF3Q9ULD4 1205 aa20.34■□□□□ 0.85
MBD1-212ENST00000585672 NEFMP07197 916 aa20.32■□□□□ 0.84
MBD1-212ENST00000585672 TIMELESSQ9UNS1 1208 aa20.31■□□□□ 0.84
MBD1-212ENST00000585672 USP35Q9P2H5 1018 aa20.31■□□□□ 0.84
MBD1-212ENST00000585672 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
MBD1-212ENST00000585672 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
MBD1-212ENST00000585672 SETD5Q9C0A6 1442 aa20.26■□□□□ 0.83
MBD1-212ENST00000585672 PABPN1Q86U42 306 aaKnown RBP eCLIP20.23■□□□□ 0.83
MBD1-212ENST00000585672 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
MBD1-212ENST00000585672 CCDC184Q52MB2 194 aa20.21■□□□□ 0.83
MBD1-212ENST00000585672 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
MBD1-212ENST00000585672 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
MBD1-212ENST00000585672 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
MBD1-212ENST00000585672 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
MBD1-212ENST00000585672 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
MBD1-212ENST00000585672 GSE1Q14687 1217 aa20.15■□□□□ 0.82
MBD1-212ENST00000585672 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
MBD1-212ENST00000585672 FAM9BQ8IZU0 186 aa20.12■□□□□ 0.81
MBD1-212ENST00000585672 AKNAQ7Z591 1439 aa20.09■□□□□ 0.81
MBD1-212ENST00000585672 PEG3Q9GZU2 1588 aa20.07■□□□□ 0.8
MBD1-212ENST00000585672 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
MBD1-212ENST00000585672 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
MBD1-212ENST00000585672 FRAT1Q92837 279 aaPredicted RBP20.05■□□□□ 0.8
MBD1-212ENST00000585672 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
MBD1-212ENST00000585672 FAM43AQ8N2R8 423 aa20.02■□□□□ 0.8
MBD1-212ENST00000585672 ZMYND15Q9H091 742 aa20.01■□□□□ 0.79
MBD1-212ENST00000585672 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
MBD1-212ENST00000585672 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
MBD1-212ENST00000585672 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
MBD1-212ENST00000585672 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
MBD1-212ENST00000585672 PDE4AP27815 886 aa19.99■□□□□ 0.79
MBD1-212ENST00000585672 PRKRIP1Q9H875 184 aaPredicted RBP19.99■□□□□ 0.79
MBD1-212ENST00000585672 GLIPR1L2Q4G1C9 344 aa19.98■□□□□ 0.79
MBD1-212ENST00000585672 NFKBIBQ15653 356 aa19.98■□□□□ 0.79
MBD1-212ENST00000585672 PRXQ9BXM0 1461 aa19.97■□□□□ 0.79
MBD1-212ENST00000585672 FAM50AQ14320 339 aaKnown RBP19.96■□□□□ 0.79
MBD1-212ENST00000585672 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
MBD1-212ENST00000585672 BACH2Q9BYV9 841 aa19.95■□□□□ 0.78
MBD1-212ENST00000585672 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
MBD1-212ENST00000585672 CNTLNQ9NXG0 1405 aa19.95■□□□□ 0.78
MBD1-212ENST00000585672 TCERG1O14776 1098 aaKnown RBP19.94■□□□□ 0.78
MBD1-212ENST00000585672 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
MBD1-212ENST00000585672 HSPA5P11021 654 aaKnown RBP19.94■□□□□ 0.78
MBD1-212ENST00000585672 NCOA2Q15596 1464 aa19.93■□□□□ 0.78
MBD1-212ENST00000585672 PHLDB1Q86UU1 1377 aa19.93■□□□□ 0.78
MBD1-212ENST00000585672 SLC24A1O60721 1099 aa19.93■□□□□ 0.78
MBD1-212ENST00000585672 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
MBD1-212ENST00000585672 ARHGAP35Q9NRY4 1499 aa19.91■□□□□ 0.78
MBD1-212ENST00000585672 PLEKHG5O94827 1062 aa19.9■□□□□ 0.78
MBD1-212ENST00000585672 KDM5BQ9UGL1 1544 aa19.88■□□□□ 0.77
MBD1-212ENST00000585672 TIAM1Q13009 1591 aa19.86■□□□□ 0.77
MBD1-212ENST00000585672 PODXL2Q9NZ53 605 aa19.85■□□□□ 0.77
MBD1-212ENST00000585672 MS4A1P11836 297 aa19.84■□□□□ 0.77
MBD1-212ENST00000585672 DDRGK1Q96HY6 314 aa19.84■□□□□ 0.77
MBD1-212ENST00000585672 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
MBD1-212ENST00000585672 SLC4A3P48751 1232 aa19.81■□□□□ 0.76
MBD1-212ENST00000585672 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
MBD1-212ENST00000585672 RRAGDQ9NQL2 400 aaPredicted RBP19.8■□□□□ 0.76
MBD1-212ENST00000585672 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.76
MBD1-212ENST00000585672 EXOC6Q8TAG9 804 aa19.78■□□□□ 0.76
MBD1-212ENST00000585672 CCDC7Q96M83 1385 aa19.77■□□□□ 0.76
MBD1-212ENST00000585672 FRAT2O75474 233 aaPredicted RBP19.75■□□□□ 0.75
MBD1-212ENST00000585672 SENP3-EIF4A1A0A087X0R7 540 aa19.75■□□□□ 0.75
MBD1-212ENST00000585672 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
MBD1-212ENST00000585672 NCOA1Q15788 1441 aa19.74■□□□□ 0.75
MBD1-212ENST00000585672 UACAQ9BZF9 1416 aa19.73■□□□□ 0.75
MBD1-212ENST00000585672 HSP90AA2PQ14568 343 aaPredicted RBP19.72■□□□□ 0.75
MBD1-212ENST00000585672 CCDC18Q5T9S5 1454 aa19.71■□□□□ 0.75
MBD1-212ENST00000585672 RRP1P56182 461 aaKnown RBP19.7■□□□□ 0.74
MBD1-212ENST00000585672 RRP9O43818 475 aaKnown RBP19.69■□□□□ 0.74
MBD1-212ENST00000585672 SKAP1Q86WV1 359 aa19.68■□□□□ 0.74
MBD1-212ENST00000585672 DAXXQ9UER7 740 aaPredicted RBP19.67■□□□□ 0.74
MBD1-212ENST00000585672 NAP1L5Q96NT1 182 aaPredicted RBP19.65■□□□□ 0.74
MBD1-212ENST00000585672 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.746e-7■■■□□ 18.9
MBD1-212ENST00000585672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.64■□□□□ 0.73
MBD1-212ENST00000585672 HSP90AA1P07900 732 aaKnown RBP19.63■□□□□ 0.73
MBD1-212ENST00000585672 KIF7Q2M1P5 1343 aa19.62■□□□□ 0.73
MBD1-212ENST00000585672 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
MBD1-212ENST00000585672 HFM1A2PYH4 1435 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms