RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	KIAA0586	Q9BVV6	1533 aa		28.53	■■■□□ 2.16
PRKAR1A-206	ENST00000585460	NPM1	P06748	294 aa	Known RBP eCLIP	28.51	■■■□□ 2.15
PRKAR1A-206	ENST00000585460	RUSC2	Q8N2Y8	1516 aa		28.51	■■■□□ 2.15
PRKAR1A-206	ENST00000585460	CARMIL1	Q5VZK9	1371 aa		28.49	■■■□□ 2.15
PRKAR1A-206	ENST00000585460	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.45	■■■□□ 2.14
PRKAR1A-206	ENST00000585460	FAM69C	Q0P6D2	419 aa		28.44	■■■□□ 2.14
PRKAR1A-206	ENST00000585460	CUL7	Q14999	1698 aa		28.37	■■■□□ 2.13
PRKAR1A-206	ENST00000585460	ABCC10	Q5T3U5	1492 aa		28.34	■■■□□ 2.13
PRKAR1A-206	ENST00000585460	PTPRG	P23470	1445 aa		28.34	■■■□□ 2.13
PRKAR1A-206	ENST00000585460	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.32	■■■□□ 2.12
PRKAR1A-206	ENST00000585460	ADCY10	Q96PN6	1610 aa		28.29	■■■□□ 2.12
PRKAR1A-206	ENST00000585460	MAPKBP1	O60336	1514 aa		28.28	■■■□□ 2.12
PRKAR1A-206	ENST00000585460	KIF13A	Q9H1H9	1805 aa		28.27	■■■□□ 2.12
PRKAR1A-206	ENST00000585460	TNIK	Q9UKE5	1360 aa		28.24	■■■□□ 2.11
PRKAR1A-206	ENST00000585460	CARMIL2	Q6F5E8	1435 aa		28.24	■■■□□ 2.11
PRKAR1A-206	ENST00000585460	DIP2B	Q9P265	1576 aa		28.16	■■■□□ 2.1
PRKAR1A-206	ENST00000585460	RAPGEF2	Q9Y4G8	1499 aa		28.14	■■■□□ 2.09
PRKAR1A-206	ENST00000585460	IQGAP2	Q13576	1575 aa		28.12	■■■□□ 2.09
PRKAR1A-206	ENST00000585460	ABCC2	Q92887	1545 aa		28.1	■■■□□ 2.09
PRKAR1A-206	ENST00000585460	DISP1	Q96F81	1524 aa		28.1	■■■□□ 2.09
PRKAR1A-206	ENST00000585460	UACA	Q9BZF9	1416 aa		28.08	■■■□□ 2.09
PRKAR1A-206	ENST00000585460	UHRF1BP1L	A0JNW5	1464 aa		28.05	■■■□□ 2.08
PRKAR1A-206	ENST00000585460	ASXL2	Q76L83	1435 aa		28.05	■■■□□ 2.08
PRKAR1A-206	ENST00000585460	UGGT2	Q9NYU1	1516 aa		28.01	■■■□□ 2.07
PRKAR1A-206	ENST00000585460	PLB1	Q6P1J6	1458 aa		28.01	■■■□□ 2.07
PRKAR1A-206	ENST00000585460	KDM5B	Q9UGL1	1544 aa		27.92	■■■□□ 2.06
PRKAR1A-206	ENST00000585460	KDM4F	A0A1W2PPD8	638 aa		27.92	■■■□□ 2.06
PRKAR1A-206	ENST00000585460	KDM6B	O15054	1643 aa		27.92	■■■□□ 2.06
PRKAR1A-206	ENST00000585460	TSPOAP1	O95153	1857 aa		27.89	■■■□□ 2.06
PRKAR1A-206	ENST00000585460	GLI2	P10070	1586 aa		27.89	■■■□□ 2.05
PRKAR1A-206	ENST00000585460	KIAA0556	O60303	1618 aa		27.86	■■■□□ 2.05
PRKAR1A-206	ENST00000585460	PRX	Q9BXM0	1461 aa		27.86	■■■□□ 2.05
PRKAR1A-206	ENST00000585460	EPRS	P07814	1512 aa	Known RBP	27.85	■■■□□ 2.05
PRKAR1A-206	ENST00000585460	GOLGA3	Q08378	1498 aa		27.78	■■■□□ 2.04
PRKAR1A-206	ENST00000585460	COL17A1	Q9UMD9	1497 aa	Predicted RBP	27.78	■■■□□ 2.04
PRKAR1A-206	ENST00000585460	CSRNP3	Q8WYN3	585 aa		27.75	■■■□□ 2.03
PRKAR1A-206	ENST00000585460	PPRC1	Q5VV67	1664 aa	Known RBP	27.75	■■■□□ 2.03
PRKAR1A-206	ENST00000585460	ZCCHC11	Q5TAX3	1644 aa	Known RBP	27.74	■■■□□ 2.03
PRKAR1A-206	ENST00000585460	KCNH8	Q96L42	1107 aa		27.74	■■■□□ 2.03
PRKAR1A-206	ENST00000585460	P3H3	Q8IVL6	736 aa		27.72	■■■□□ 2.03
PRKAR1A-206	ENST00000585460	WDR7	Q9Y4E6	1490 aa		27.71	■■■□□ 2.03
PRKAR1A-206	ENST00000585460	ABCA8	O94911	1581 aa		27.68	■■■□□ 2.02
PRKAR1A-206	ENST00000585460	TEX14	Q8IWB6	1497 aa		27.67	■■■□□ 2.02
PRKAR1A-206	ENST00000585460	MAP3K4	Q9Y6R4	1608 aa		27.67	■■■□□ 2.02
PRKAR1A-206	ENST00000585460	CTTNBP2	Q8WZ74	1663 aa		27.66	■■■□□ 2.02
PRKAR1A-206	ENST00000585460	FAM9A	Q8IZU1	332 aa	Predicted RBP	27.65	■■■□□ 2.02
PRKAR1A-206	ENST00000585460	CD109	Q6YHK3	1445 aa		27.63	■■■□□ 2.01
PRKAR1A-206	ENST00000585460	ARID3C	A6NKF2	412 aa		27.62	■■■□□ 2.01
PRKAR1A-206	ENST00000585460	ATP10B	O94823	1461 aa		27.56	■■■□□ 2
PRKAR1A-206	ENST00000585460	MAGI3	Q5TCQ9	1506 aa		27.55	■■■□□ 2
PRKAR1A-206	ENST00000585460	ADGRL1	O94910	1474 aa		27.52	■■■□□ 2
PRKAR1A-206	ENST00000585460	RANGAP1	P46060	587 aa	Predicted RBP	27.5	■■□□□ 1.99
PRKAR1A-206	ENST00000585460	EEA1	Q15075	1411 aa		27.46	■■□□□ 1.99
PRKAR1A-206	ENST00000585460	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	27.43	■■□□□ 1.98
PRKAR1A-206	ENST00000585460	HNRNPUL2	Q1KMD3	747 aa	Known RBP	27.43	■■□□□ 1.98
PRKAR1A-206	ENST00000585460	CFAP43	Q8NDM7	1665 aa		27.41	■■□□□ 1.98
PRKAR1A-206	ENST00000585460	SAMD9	Q5K651	1589 aa		27.4	■■□□□ 1.98
PRKAR1A-206	ENST00000585460	ARAP3	Q8WWN8	1544 aa		27.35	■■□□□ 1.97
PRKAR1A-206	ENST00000585460	FHOD3	Q2V2M9	1422 aa		27.33	■■□□□ 1.97
PRKAR1A-206	ENST00000585460	PHLDB1	Q86UU1	1377 aa		27.33	■■□□□ 1.97
PRKAR1A-206	ENST00000585460	NUP153	P49790	1475 aa	Known RBP	27.32	■■□□□ 1.96
PRKAR1A-206	ENST00000585460	RAPGEF3	O95398	923 aa		27.31	■■□□□ 1.96
PRKAR1A-206	ENST00000585460	RAPGEF6	Q8TEU7	1601 aa		27.3	■■□□□ 1.96
PRKAR1A-206	ENST00000585460	PLEKHD1	A6NEE1	506 aa		27.3	■■□□□ 1.96
PRKAR1A-206	ENST00000585460	ABCA9	Q8IUA7	1624 aa		27.26	■■□□□ 1.95
PRKAR1A-206	ENST00000585460	EHMT2	Q96KQ7	1210 aa		27.23	■■□□□ 1.95
PRKAR1A-206	ENST00000585460	NEO1	Q92859	1461 aa		27.21	■■□□□ 1.95
PRKAR1A-206	ENST00000585460	CHIC1	Q5VXU3	224 aa		27.21	■■□□□ 1.95
PRKAR1A-206	ENST00000585460	UBTF	P17480	764 aa	Known RBP	27.19	■■□□□ 1.94
PRKAR1A-206	ENST00000585460	KIF21B	O75037	1637 aa		27.16	■■□□□ 1.94
PRKAR1A-206	ENST00000585460	EFCAB5	A4FU69	1503 aa		27.12	■■□□□ 1.93
PRKAR1A-206	ENST00000585460	ILDR1	Q86SU0	546 aa	Predicted RBP	27.11	■■□□□ 1.93
PRKAR1A-206	ENST00000585460	HECW2	Q9P2P5	1572 aa		27.09	■■□□□ 1.93
PRKAR1A-206	ENST00000585460	AKNA	Q7Z591	1439 aa		27.08	■■□□□ 1.93
PRKAR1A-206	ENST00000585460	ATP1B4	Q9UN42	357 aa	Predicted RBP	27.08	■■□□□ 1.93
PRKAR1A-206	ENST00000585460	ARID4B	Q4LE39	1312 aa	Predicted RBP	27.07	■■□□□ 1.92
PRKAR1A-206	ENST00000585460	DENND4B	O75064	1496 aa	Predicted RBP	27.05	■■□□□ 1.92
PRKAR1A-206	ENST00000585460	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	27.04	■■□□□ 1.92	4e-7	■■■■□ 24.6
PRKAR1A-206	ENST00000585460	FANCA	O15360	1455 aa		27.03	■■□□□ 1.92
PRKAR1A-206	ENST00000585460	FRMPD1	Q5SYB0	1578 aa		27.01	■■□□□ 1.92
PRKAR1A-206	ENST00000585460	CDK13	Q14004	1512 aa	Known RBP	27	■■□□□ 1.91
PRKAR1A-206	ENST00000585460	PTPRM	P28827	1452 aa		27	■■□□□ 1.91
PRKAR1A-206	ENST00000585460	ARHGAP35	Q9NRY4	1499 aa		26.99	■■□□□ 1.91
PRKAR1A-206	ENST00000585460	FMN1	Q68DA7	1419 aa		26.98	■■□□□ 1.91
PRKAR1A-206	ENST00000585460	CDK11A	Q9UQ88	783 aa	Predicted RBP	26.96	■■□□□ 1.91
PRKAR1A-206	ENST00000585460	PLCH2	O75038	1416 aa		26.96	■■□□□ 1.91
PRKAR1A-206	ENST00000585460	ADAMTSL3	P82987	1691 aa		26.95	■■□□□ 1.9
PRKAR1A-206	ENST00000585460	TTC37	Q6PGP7	1564 aa		26.93	■■□□□ 1.9
PRKAR1A-206	ENST00000585460	EFCAB2	Q5VUJ9	269 aa		26.92	■■□□□ 1.9
PRKAR1A-206	ENST00000585460	SCAPER	Q9BY12	1400 aa		26.9	■■□□□ 1.9
PRKAR1A-206	ENST00000585460	YEATS2	Q9ULM3	1422 aa		26.88	■■□□□ 1.89
PRKAR1A-206	ENST00000585460	BCORL1	Q5H9F3	1711 aa		26.85	■■□□□ 1.89
PRKAR1A-206	ENST00000585460	RICTOR	Q6R327	1708 aa		26.85	■■□□□ 1.89
PRKAR1A-206	ENST00000585460	ARHGEF40	Q8TER5	1519 aa		26.85	■■□□□ 1.89
PRKAR1A-206	ENST00000585460	MAGI2	Q86UL8	1455 aa		26.84	■■□□□ 1.89
PRKAR1A-206	ENST00000585460	CFAP74	Q9C0B2	1584 aa		26.84	■■□□□ 1.89
PRKAR1A-206	ENST00000585460	MLEC	Q14165	292 aa		26.82	■■□□□ 1.88
PRKAR1A-206	ENST00000585460	TRO	Q12816	1431 aa	Predicted RBP	26.82	■■□□□ 1.88
PRKAR1A-206	ENST00000585460	ZMYM4	Q5VZL5	1548 aa		26.81	■■□□□ 1.88
PRKAR1A-206	ENST00000585460	HECW1	Q76N89	1606 aa		26.81	■■□□□ 1.88

Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms