RNA–Protein interactions for RNA: ENST00000585400.1

NPHS1-203, Transcript of NPHS1, nephrin, humanhuman

TSL 1 (best)

Gene NPHS1, Length 999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-203ENST00000585400 SHROOM2Q13796 1616 aa37.69■■■■□ 3.62
NPHS1-203ENST00000585400 KIAA0586Q9BVV6 1533 aa37.67■■■■□ 3.62
NPHS1-203ENST00000585400 JPH4Q96JJ6 628 aa37.67■■■■□ 3.62
NPHS1-203ENST00000585400 ERCC6L2Q5T890 1561 aa37.64■■■■□ 3.62
NPHS1-203ENST00000585400 EEA1Q15075 1411 aa37.6■■■■□ 3.61
NPHS1-203ENST00000585400 CSRNP3Q8WYN3 585 aa37.59■■■■□ 3.61
NPHS1-203ENST00000585400 PRG4Q92954 1404 aaPredicted RBP37.59■■■■□ 3.61
NPHS1-203ENST00000585400 PRXQ9BXM0 1461 aa37.58■■■■□ 3.61
NPHS1-203ENST00000585400 TRHP20396 242 aaPredicted RBP37.57■■■■□ 3.6
NPHS1-203ENST00000585400 FAM9AQ8IZU1 332 aaPredicted RBP37.54■■■■□ 3.6
NPHS1-203ENST00000585400 IQGAP2Q13576 1575 aa37.46■■■■□ 3.59
NPHS1-203ENST00000585400 CTTNBP2Q8WZ74 1663 aa37.3■■■■□ 3.56
NPHS1-203ENST00000585400 CARMIL2Q6F5E8 1435 aa37.28■■■■□ 3.56
NPHS1-203ENST00000585400 UGGT2Q9NYU1 1516 aa37.26■■■■□ 3.55
NPHS1-203ENST00000585400 DISP1Q96F81 1524 aa37.2■■■■□ 3.55
NPHS1-203ENST00000585400 KIF21BO75037 1637 aa37.19■■■■□ 3.54
NPHS1-203ENST00000585400 TNIKQ9UKE5 1360 aa37.17■■■■□ 3.54
NPHS1-203ENST00000585400 TTBK1Q5TCY1 1321 aaPredicted RBP37.15■■■■□ 3.54
NPHS1-203ENST00000585400 PTPRGP23470 1445 aa37.15■■■■□ 3.54
NPHS1-203ENST00000585400 KIAA0556O60303 1618 aa37.1■■■■□ 3.53
NPHS1-203ENST00000585400 EHMT2Q96KQ7 1210 aa37.08■■■■□ 3.53
NPHS1-203ENST00000585400 GOLGA3Q08378 1498 aa37.06■■■■□ 3.52
NPHS1-203ENST00000585400 ADCY10Q96PN6 1610 aa36.99■■■■□ 3.51
NPHS1-203ENST00000585400 UBTFP17480 764 aaKnown RBP36.96■■■■□ 3.51
NPHS1-203ENST00000585400 RANGAP1P46060 587 aaPredicted RBP36.93■■■■□ 3.5
NPHS1-203ENST00000585400 NPM1P06748 294 aaKnown RBP eCLIP36.92■■■■□ 3.5
NPHS1-203ENST00000585400 P3H3Q8IVL6 736 aa36.9■■■■□ 3.5
NPHS1-203ENST00000585400 UACAQ9BZF9 1416 aa36.89■■■■□ 3.5
NPHS1-203ENST00000585400 SAMD9Q5K651 1589 aa36.85■■■■□ 3.49
NPHS1-203ENST00000585400 UHRF1BP1LA0JNW5 1464 aa36.83■■■■□ 3.49
NPHS1-203ENST00000585400 ABCC2Q92887 1545 aa36.8■■■■□ 3.48
NPHS1-203ENST00000585400 PLB1Q6P1J6 1458 aa36.76■■■■□ 3.48
NPHS1-203ENST00000585400 KIF13AQ9H1H9 1805 aa36.75■■■■□ 3.47
NPHS1-203ENST00000585400 MAPKBP1O60336 1514 aa36.73■■■■□ 3.47
NPHS1-203ENST00000585400 EFCAB5A4FU69 1503 aa36.7■■■■□ 3.47
NPHS1-203ENST00000585400 FHOD3Q2V2M9 1422 aa36.7■■■■□ 3.47
NPHS1-203ENST00000585400 ABCA8O94911 1581 aa36.7■■■■□ 3.46
NPHS1-203ENST00000585400 KDM5BQ9UGL1 1544 aa36.65■■■■□ 3.46
NPHS1-203ENST00000585400 ABCC10Q5T3U5 1492 aa36.63■■■■□ 3.45
NPHS1-203ENST00000585400 FAM69CQ0P6D2 419 aa36.62■■■■□ 3.45
NPHS1-203ENST00000585400 DIP2BQ9P265 1576 aa36.61■■■■□ 3.45
NPHS1-203ENST00000585400 ZCCHC11Q5TAX3 1644 aaKnown RBP36.58■■■■□ 3.45
NPHS1-203ENST00000585400 ASXL2Q76L83 1435 aa36.58■■■■□ 3.45
NPHS1-203ENST00000585400 ARHGAP35Q9NRY4 1499 aa36.55■■■■□ 3.44
NPHS1-203ENST00000585400 RAPGEF6Q8TEU7 1601 aa36.5■■■■□ 3.43
NPHS1-203ENST00000585400 ARID3CA6NKF2 412 aa36.49■■■■□ 3.43
NPHS1-203ENST00000585400 ATP10BO94823 1461 aa36.42■■■■□ 3.42
NPHS1-203ENST00000585400 NUP153P49790 1475 aaKnown RBP36.39■■■■□ 3.42
NPHS1-203ENST00000585400 WDR7Q9Y4E6 1490 aa36.38■■■■□ 3.41
NPHS1-203ENST00000585400 FMN1Q68DA7 1419 aa36.38■■■■□ 3.41
NPHS1-203ENST00000585400 TSPOAP1O95153 1857 aa36.37■■■■□ 3.41
NPHS1-203ENST00000585400 CLIP1P30622 1438 aa36.36■■■■□ 3.41
NPHS1-203ENST00000585400 EPRSP07814 1512 aaKnown RBP36.34■■■■□ 3.41
NPHS1-203ENST00000585400 LOC105371045A0A1W2PR82 267 aa36.33■■■■□ 3.41
NPHS1-203ENST00000585400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.32■■■■□ 3.4
NPHS1-203ENST00000585400 HNRNPUL2Q1KMD3 747 aaKnown RBP36.32■■■■□ 3.4
NPHS1-203ENST00000585400 GLI2P10070 1586 aa36.31■■■■□ 3.4
NPHS1-203ENST00000585400 KCNH8Q96L42 1107 aa36.27■■■■□ 3.4
NPHS1-203ENST00000585400 ATP1B4Q9UN42 357 aaPredicted RBP36.26■■■■□ 3.4
NPHS1-203ENST00000585400 KDM6BO15054 1643 aa36.24■■■■□ 3.39
NPHS1-203ENST00000585400 CEP162Q5TB80 1403 aa36.2■■■■□ 3.39
NPHS1-203ENST00000585400 HECW1Q76N89 1606 aa36.19■■■■□ 3.38
NPHS1-203ENST00000585400 AEBP2Q6ZN18 517 aaPredicted RBP36.19■■■■□ 3.38
NPHS1-203ENST00000585400 CDK13Q14004 1512 aaKnown RBP36.16■■■■□ 3.38
NPHS1-203ENST00000585400 MAP3K4Q9Y6R4 1608 aa36.14■■■■□ 3.38
NPHS1-203ENST00000585400 PLEKHD1A6NEE1 506 aa36.12■■■■□ 3.37
NPHS1-203ENST00000585400 CASKIN1Q8WXD9 1431 aa36.1■■■■□ 3.37
NPHS1-203ENST00000585400 PCF11O94913 1555 aaKnown RBP36.1■■■■□ 3.37
NPHS1-203ENST00000585400 PPRC1Q5VV67 1664 aaKnown RBP36.1■■■■□ 3.37
NPHS1-203ENST00000585400 CD109Q6YHK3 1445 aa36.06■■■■□ 3.36
NPHS1-203ENST00000585400 CFAP43Q8NDM7 1665 aa36.03■■■■□ 3.36
NPHS1-203ENST00000585400 FYCO1Q9BQS8 1478 aa36.01■■■■□ 3.36
NPHS1-203ENST00000585400 TEX14Q8IWB6 1497 aa35.99■■■■□ 3.35
NPHS1-203ENST00000585400 LRRIQ1Q96JM4 1722 aa35.97■■■■□ 3.35
NPHS1-203ENST00000585400 CDK11AQ9UQ88 783 aaPredicted RBP35.97■■■■□ 3.35
NPHS1-203ENST00000585400 ABCA9Q8IUA7 1624 aa35.97■■■■□ 3.35
NPHS1-203ENST00000585400 MAGI3Q5TCQ9 1506 aa35.96■■■■□ 3.35
NPHS1-203ENST00000585400 CCDC18Q5T9S5 1454 aa35.95■■■■□ 3.35
NPHS1-203ENST00000585400 TROQ12816 1431 aaPredicted RBP35.86■■■■□ 3.33
NPHS1-203ENST00000585400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.85■■■■□ 3.33
NPHS1-203ENST00000585400 TTC37Q6PGP7 1564 aa35.81■■■■□ 3.32
NPHS1-203ENST00000585400 COL17A1Q9UMD9 1497 aaPredicted RBP35.79■■■■□ 3.32
NPHS1-203ENST00000585400 KIF14Q15058 1648 aa35.75■■■■□ 3.31
NPHS1-203ENST00000585400 VPS8Q8N3P4 1428 aa35.75■■■■□ 3.31
NPHS1-203ENST00000585400 NEO1Q92859 1461 aa35.69■■■■□ 3.3
NPHS1-203ENST00000585400 PHLDB1Q86UU1 1377 aa35.67■■■■□ 3.3
NPHS1-203ENST00000585400 PLCH2O75038 1416 aa35.65■■■■□ 3.3
NPHS1-203ENST00000585400 ARAP3Q8WWN8 1544 aa35.64■■■■□ 3.3
NPHS1-203ENST00000585400 FANCAO15360 1455 aa35.64■■■■□ 3.3
NPHS1-203ENST00000585400 MTUS2Q5JR59 1369 aa35.63■■■■□ 3.29
NPHS1-203ENST00000585400 KDM4FA0A1W2PPD8 638 aa35.61■■■■□ 3.29
NPHS1-203ENST00000585400 MYO5CQ9NQX4 1742 aa35.59■■■■□ 3.29
NPHS1-203ENST00000585400 CFAP74Q9C0B2 1584 aa35.59■■■■□ 3.29
NPHS1-203ENST00000585400 AKNAQ7Z591 1439 aa35.58■■■■□ 3.29
NPHS1-203ENST00000585400 EFCAB2Q5VUJ9 269 aa35.54■■■■□ 3.28
NPHS1-203ENST00000585400 RAPGEF3O95398 923 aa35.52■■■■□ 3.28
NPHS1-203ENST00000585400 EHBP1L1Q8N3D4 1523 aa35.52■■■■□ 3.28
NPHS1-203ENST00000585400 TIAM1Q13009 1591 aa35.51■■■■□ 3.28
NPHS1-203ENST00000585400 ADGRL1O94910 1474 aa35.51■■■■□ 3.28
NPHS1-203ENST00000585400 ARHGAP5Q13017 1502 aa35.51■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms