RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 JPH4Q96JJ6 628 aa39.17■■■■□ 3.86
LSM7-202ENST00000585395 ABCC10Q5T3U5 1492 aa39.12■■■■□ 3.85
LSM7-202ENST00000585395 FAM69CQ0P6D2 419 aa39.1■■■■□ 3.85
LSM7-202ENST00000585395 CUL7Q14999 1698 aa39.09■■■■□ 3.85
LSM7-202ENST00000585395 NPM1P06748 294 aaKnown RBP eCLIP39.07■■■■□ 3.85
LSM7-202ENST00000585395 IGF1RP08069 1367 aa39.06■■■■□ 3.84
LSM7-202ENST00000585395 MAPKBP1O60336 1514 aa39.05■■■■□ 3.84
LSM7-202ENST00000585395 RUSC2Q8N2Y8 1516 aa38.99■■■■□ 3.83
LSM7-202ENST00000585395 DIP2BQ9P265 1576 aa38.97■■■■□ 3.83
LSM7-202ENST00000585395 CARMIL1Q5VZK9 1371 aa38.91■■■■□ 3.82
LSM7-202ENST00000585395 ADCY10Q96PN6 1610 aa38.9■■■■□ 3.82
LSM7-202ENST00000585395 KDM6BO15054 1643 aa38.85■■■■□ 3.81
LSM7-202ENST00000585395 KDM4FA0A1W2PPD8 638 aa38.83■■■■□ 3.81
LSM7-202ENST00000585395 KIAA0586Q9BVV6 1533 aa38.74■■■■□ 3.79
LSM7-202ENST00000585395 TSPOAP1O95153 1857 aa38.69■■■■□ 3.78
LSM7-202ENST00000585395 CHIC1Q5VXU3 224 aa38.68■■■■□ 3.78
LSM7-202ENST00000585395 RAPGEF2Q9Y4G8 1499 aa38.66■■■■□ 3.78
LSM7-202ENST00000585395 IQGAP2Q13576 1575 aa38.54■■■■□ 3.76
LSM7-202ENST00000585395 PTPRGP23470 1445 aa38.54■■■■□ 3.76
LSM7-202ENST00000585395 ILDR1Q86SU0 546 aaPredicted RBP38.49■■■■□ 3.75
LSM7-202ENST00000585395 ABCC2Q92887 1545 aa38.45■■■■□ 3.75
LSM7-202ENST00000585395 EEA1Q15075 1411 aa38.44■■■■□ 3.74
LSM7-202ENST00000585395 CARMIL2Q6F5E8 1435 aa38.42■■■■□ 3.74
LSM7-202ENST00000585395 GLI2P10070 1586 aa38.41■■■■□ 3.74
LSM7-202ENST00000585395 PLB1Q6P1J6 1458 aa38.41■■■■□ 3.74
LSM7-202ENST00000585395 TNIKQ9UKE5 1360 aa38.4■■■■□ 3.74
LSM7-202ENST00000585395 ASXL2Q76L83 1435 aa38.39■■■■□ 3.74
LSM7-202ENST00000585395 CTTNBP2Q8WZ74 1663 aa38.38■■■■□ 3.73
LSM7-202ENST00000585395 TTBK1Q5TCY1 1321 aaPredicted RBP38.37■■■■□ 3.73
LSM7-202ENST00000585395 PPRC1Q5VV67 1664 aaKnown RBP38.36■■■■□ 3.73
LSM7-202ENST00000585395 PRXQ9BXM0 1461 aa38.36■■■■□ 3.73
LSM7-202ENST00000585395 CSRNP3Q8WYN3 585 aa38.34■■■■□ 3.73
LSM7-202ENST00000585395 ADGRL1O94910 1474 aa38.33■■■■□ 3.73
LSM7-202ENST00000585395 UHRF1BP1LA0JNW5 1464 aa38.31■■■■□ 3.72
LSM7-202ENST00000585395 FAM9AQ8IZU1 332 aaPredicted RBP38.28■■■■□ 3.72
LSM7-202ENST00000585395 UGGT2Q9NYU1 1516 aa38.25■■■■□ 3.71
LSM7-202ENST00000585395 UACAQ9BZF9 1416 aa38.22■■■■□ 3.71
LSM7-202ENST00000585395 DISP1Q96F81 1524 aa38.19■■■■□ 3.7
LSM7-202ENST00000585395 COL17A1Q9UMD9 1497 aaPredicted RBP38.17■■■■□ 3.7
LSM7-202ENST00000585395 KIAA0556O60303 1618 aa38.16■■■■□ 3.7
LSM7-202ENST00000585395 MAP3K4Q9Y6R4 1608 aa38.16■■■■□ 3.7
LSM7-202ENST00000585395 EPRSP07814 1512 aaKnown RBP38.15■■■■□ 3.7
LSM7-202ENST00000585395 TEX14Q8IWB6 1497 aa38.15■■■■□ 3.7
LSM7-202ENST00000585395 KDM5BQ9UGL1 1544 aa38.13■■■■□ 3.69
LSM7-202ENST00000585395 GOLGA3Q08378 1498 aa38.1■■■■□ 3.69
LSM7-202ENST00000585395 HECW2Q9P2P5 1572 aa38.06■■■■□ 3.68
LSM7-202ENST00000585395 ZCCHC11Q5TAX3 1644 aaKnown RBP38.01■■■■□ 3.67
LSM7-202ENST00000585395 KIF21BO75037 1637 aa37.97■■■■□ 3.67
LSM7-202ENST00000585395 WDR7Q9Y4E6 1490 aa37.89■■■■□ 3.66
LSM7-202ENST00000585395 RANGAP1P46060 587 aaPredicted RBP37.87■■■■□ 3.65
LSM7-202ENST00000585395 EHMT2Q96KQ7 1210 aa37.87■■■■□ 3.65
LSM7-202ENST00000585395 P3H3Q8IVL6 736 aa37.85■■■■□ 3.65
LSM7-202ENST00000585395 MAGI3Q5TCQ9 1506 aa37.78■■■■□ 3.64
LSM7-202ENST00000585395 UBTFP17480 764 aaKnown RBP37.77■■■■□ 3.64
LSM7-202ENST00000585395 SAMD9Q5K651 1589 aa37.76■■■■□ 3.64
LSM7-202ENST00000585395 CD109Q6YHK3 1445 aa37.75■■■■□ 3.63
LSM7-202ENST00000585395 CFAP43Q8NDM7 1665 aa37.74■■■■□ 3.63
LSM7-202ENST00000585395 ABCA8O94911 1581 aa37.71■■■■□ 3.63
LSM7-202ENST00000585395 KCNH8Q96L42 1107 aa37.63■■■■□ 3.61
LSM7-202ENST00000585395 EFCAB5A4FU69 1503 aa37.6■■■■□ 3.61
LSM7-202ENST00000585395 FHOD3Q2V2M9 1422 aa37.59■■■■□ 3.61
LSM7-202ENST00000585395 ARID3CA6NKF2 412 aa37.55■■■■□ 3.6
LSM7-202ENST00000585395 FBXO41Q8TF61 875 aa37.55■■■■□ 3.6
LSM7-202ENST00000585395 RAPGEF6Q8TEU7 1601 aa37.54■■■■□ 3.6
LSM7-202ENST00000585395 ARAP3Q8WWN8 1544 aa37.52■■■■□ 3.6
LSM7-202ENST00000585395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.45■■■■□ 3.59
LSM7-202ENST00000585395 HNRNPUL2Q1KMD3 747 aaKnown RBP37.45■■■■□ 3.59
LSM7-202ENST00000585395 PHLDB1Q86UU1 1377 aa37.4■■■■□ 3.58
LSM7-202ENST00000585395 ATP10BO94823 1461 aa37.39■■■■□ 3.58
LSM7-202ENST00000585395 PTPRMP28827 1452 aa37.37■■■■□ 3.57
LSM7-202ENST00000585395 ADAMTSL3P82987 1691 aa37.35■■■■□ 3.57
LSM7-202ENST00000585395 NUP153P49790 1475 aaKnown RBP37.32■■■■□ 3.56
LSM7-202ENST00000585395 ARHGAP35Q9NRY4 1499 aa37.32■■■■□ 3.56
LSM7-202ENST00000585395 ABCA9Q8IUA7 1624 aa37.28■■■■□ 3.56
LSM7-202ENST00000585395 FMN1Q68DA7 1419 aa37.27■■■■□ 3.56
LSM7-202ENST00000585395 ATP1B4Q9UN42 357 aaPredicted RBP37.26■■■■□ 3.56
LSM7-202ENST00000585395 NEO1Q92859 1461 aa37.22■■■■□ 3.55
LSM7-202ENST00000585395 RAPGEF3O95398 923 aa37.2■■■■□ 3.55
LSM7-202ENST00000585395 BCORL1Q5H9F3 1711 aa37.18■■■■□ 3.54
LSM7-202ENST00000585395 HECW1Q76N89 1606 aa37.18■■■■□ 3.54
LSM7-202ENST00000585395 PCF11O94913 1555 aaKnown RBP37.17■■■■□ 3.54
LSM7-202ENST00000585395 PLEKHD1A6NEE1 506 aa37.15■■■■□ 3.54
LSM7-202ENST00000585395 MADDQ8WXG6 1647 aa37.11■■■■□ 3.53
LSM7-202ENST00000585395 LMTK3Q96Q04 1460 aa37.11■■■■□ 3.53
LSM7-202ENST00000585395 ARID4BQ4LE39 1312 aaPredicted RBP37.1■■■■□ 3.53
LSM7-202ENST00000585395 CDK13Q14004 1512 aaKnown RBP37.1■■■■□ 3.53
LSM7-202ENST00000585395 FRMPD1Q5SYB0 1578 aa37.09■■■■□ 3.53
LSM7-202ENST00000585395 CLIP1P30622 1438 aa37.08■■■■□ 3.53
LSM7-202ENST00000585395 LOC105371045A0A1W2PR82 267 aa37.03■■■■□ 3.52
LSM7-202ENST00000585395 ARHGEF40Q8TER5 1519 aa36.98■■■■□ 3.51
LSM7-202ENST00000585395 CDK11AQ9UQ88 783 aaPredicted RBP36.97■■■■□ 3.51
LSM7-202ENST00000585395 RIMS1Q86UR5 1692 aaKnown RBP36.95■■■■□ 3.51
LSM7-202ENST00000585395 CEP162Q5TB80 1403 aa36.93■■■■□ 3.5
LSM7-202ENST00000585395 DENND4BO75064 1496 aaPredicted RBP36.93■■■■□ 3.5
LSM7-202ENST00000585395 CASKIN1Q8WXD9 1431 aa36.9■■■■□ 3.5
LSM7-202ENST00000585395 RICTORQ6R327 1708 aa36.88■■■■□ 3.49
LSM7-202ENST00000585395 POGZQ7Z3K3 1410 aa36.86■■■■□ 3.49
LSM7-202ENST00000585395 LRRIQ1Q96JM4 1722 aa36.86■■■■□ 3.49
LSM7-202ENST00000585395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.85■■■■□ 3.497e-7■■□□□ 14.3
LSM7-202ENST00000585395 CCDC18Q5T9S5 1454 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms