RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 NUP160Q12769 1436 aa22.31■■□□□ 1.16
CHAF1A-202ENST00000585371 PRXQ9BXM0 1461 aa22.29■■□□□ 1.16
CHAF1A-202ENST00000585371 CSRNP3Q8WYN3 585 aa22.27■■□□□ 1.16
CHAF1A-202ENST00000585371 RAPGEF2Q9Y4G8 1499 aa22.25■■□□□ 1.15
CHAF1A-202ENST00000585371 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
CHAF1A-202ENST00000585371 ERCC6L2Q5T890 1561 aa22.23■■□□□ 1.15
CHAF1A-202ENST00000585371 FAM9AQ8IZU1 332 aaPredicted RBP22.22■■□□□ 1.15
CHAF1A-202ENST00000585371 KIF21BO75037 1637 aa22.17■■□□□ 1.14
CHAF1A-202ENST00000585371 KIAA0586Q9BVV6 1533 aa22.12■■□□□ 1.13
CHAF1A-202ENST00000585371 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
CHAF1A-202ENST00000585371 PRG4Q92954 1404 aaPredicted RBP22.08■■□□□ 1.13
CHAF1A-202ENST00000585371 JPH4Q96JJ6 628 aa22.06■■□□□ 1.12
CHAF1A-202ENST00000585371 IQGAP2Q13576 1575 aa22.05■■□□□ 1.12
CHAF1A-202ENST00000585371 GOLGA3Q08378 1498 aa21.99■■□□□ 1.11
CHAF1A-202ENST00000585371 UGGT2Q9NYU1 1516 aa21.97■■□□□ 1.11
CHAF1A-202ENST00000585371 KIF13AQ9H1H9 1805 aa21.96■■□□□ 1.11
CHAF1A-202ENST00000585371 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
CHAF1A-202ENST00000585371 DISP1Q96F81 1524 aa21.91■■□□□ 1.1
CHAF1A-202ENST00000585371 NPM1P06748 294 aaKnown RBP eCLIP21.89■■□□□ 1.09
CHAF1A-202ENST00000585371 EHMT2Q96KQ7 1210 aa21.89■■□□□ 1.09
CHAF1A-202ENST00000585371 MAPKBP1O60336 1514 aa21.87■■□□□ 1.09
CHAF1A-202ENST00000585371 KIAA0556O60303 1618 aa21.87■■□□□ 1.09
CHAF1A-202ENST00000585371 ADCY10Q96PN6 1610 aa21.85■■□□□ 1.09
CHAF1A-202ENST00000585371 ABCC10Q5T3U5 1492 aa21.84■■□□□ 1.09
CHAF1A-202ENST00000585371 SAMD9Q5K651 1589 aa21.84■■□□□ 1.09
CHAF1A-202ENST00000585371 UBTFP17480 764 aaKnown RBP21.83■■□□□ 1.09
CHAF1A-202ENST00000585371 CARMIL2Q6F5E8 1435 aa21.8■■□□□ 1.08
CHAF1A-202ENST00000585371 DIP2BQ9P265 1576 aa21.79■■□□□ 1.08
CHAF1A-202ENST00000585371 FAM69CQ0P6D2 419 aa21.79■■□□□ 1.08
CHAF1A-202ENST00000585371 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
CHAF1A-202ENST00000585371 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
CHAF1A-202ENST00000585371 PTPRGP23470 1445 aa21.73■■□□□ 1.07
CHAF1A-202ENST00000585371 EFCAB5A4FU69 1503 aa21.73■■□□□ 1.07
CHAF1A-202ENST00000585371 ARHGAP35Q9NRY4 1499 aa21.71■■□□□ 1.07
CHAF1A-202ENST00000585371 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
CHAF1A-202ENST00000585371 P3H3Q8IVL6 736 aa21.66■■□□□ 1.06
CHAF1A-202ENST00000585371 ABCC2Q92887 1545 aa21.65■■□□□ 1.06
CHAF1A-202ENST00000585371 TSPOAP1O95153 1857 aa21.64■■□□□ 1.06
CHAF1A-202ENST00000585371 FHOD3Q2V2M9 1422 aa21.64■■□□□ 1.06
CHAF1A-202ENST00000585371 KDM6BO15054 1643 aa21.63■■□□□ 1.05
CHAF1A-202ENST00000585371 ABCA8O94911 1581 aa21.63■■□□□ 1.05
CHAF1A-202ENST00000585371 UHRF1BP1LA0JNW5 1464 aa21.61■■□□□ 1.05
CHAF1A-202ENST00000585371 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
CHAF1A-202ENST00000585371 UACAQ9BZF9 1416 aa21.6■■□□□ 1.05
CHAF1A-202ENST00000585371 PLB1Q6P1J6 1458 aa21.59■■□□□ 1.05
CHAF1A-202ENST00000585371 CLIP1P30622 1438 aa21.59■■□□□ 1.05
CHAF1A-202ENST00000585371 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
CHAF1A-202ENST00000585371 ASXL2Q76L83 1435 aa21.56■■□□□ 1.04
CHAF1A-202ENST00000585371 GLI2P10070 1586 aa21.56■■□□□ 1.04
CHAF1A-202ENST00000585371 RAPGEF6Q8TEU7 1601 aa21.55■■□□□ 1.04
CHAF1A-202ENST00000585371 KDM5BQ9UGL1 1544 aa21.5■■□□□ 1.03
CHAF1A-202ENST00000585371 ZCCHC11Q5TAX3 1644 aaKnown RBP21.48■■□□□ 1.03
CHAF1A-202ENST00000585371 PPRC1Q5VV67 1664 aaKnown RBP21.48■■□□□ 1.03
CHAF1A-202ENST00000585371 FMN1Q68DA7 1419 aa21.47■■□□□ 1.03
CHAF1A-202ENST00000585371 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.03
CHAF1A-202ENST00000585371 LRRIQ1Q96JM4 1722 aa21.45■■□□□ 1.02
CHAF1A-202ENST00000585371 EPRSP07814 1512 aaKnown RBP21.44■■□□□ 1.02
CHAF1A-202ENST00000585371 PCF11O94913 1555 aaKnown RBP21.43■■□□□ 1.02
CHAF1A-202ENST00000585371 MAP3K4Q9Y6R4 1608 aa21.43■■□□□ 1.02
CHAF1A-202ENST00000585371 ATP10BO94823 1461 aa21.42■■□□□ 1.02
CHAF1A-202ENST00000585371 HECW1Q76N89 1606 aa21.4■■□□□ 1.02
CHAF1A-202ENST00000585371 TEX14Q8IWB6 1497 aa21.39■■□□□ 1.02
CHAF1A-202ENST00000585371 KDM4FA0A1W2PPD8 638 aa21.39■■□□□ 1.01
CHAF1A-202ENST00000585371 CASKIN1Q8WXD9 1431 aa21.38■■□□□ 1.01
CHAF1A-202ENST00000585371 WDR7Q9Y4E6 1490 aa21.36■■□□□ 1.01
CHAF1A-202ENST00000585371 FYCO1Q9BQS8 1478 aa21.34■■□□□ 1.01
CHAF1A-202ENST00000585371 CDK13Q14004 1512 aaKnown RBP21.34■■□□□ 1.01
CHAF1A-202ENST00000585371 ARID3CA6NKF2 412 aa21.32■■□□□ 1
CHAF1A-202ENST00000585371 VPS8Q8N3P4 1428 aa21.3■■□□□ 1
CHAF1A-202ENST00000585371 COL17A1Q9UMD9 1497 aaPredicted RBP21.29■■□□□ 1
CHAF1A-202ENST00000585371 CFAP43Q8NDM7 1665 aa21.28■■□□□ 1
CHAF1A-202ENST00000585371 ATP1B4Q9UN42 357 aaPredicted RBP21.24■□□□□ 0.99
CHAF1A-202ENST00000585371 ADGRL1O94910 1474 aa21.24■□□□□ 0.99
CHAF1A-202ENST00000585371 CCDC18Q5T9S5 1454 aa21.24■□□□□ 0.99
CHAF1A-202ENST00000585371 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
CHAF1A-202ENST00000585371 CD109Q6YHK3 1445 aa21.22■□□□□ 0.99
CHAF1A-202ENST00000585371 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
CHAF1A-202ENST00000585371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
CHAF1A-202ENST00000585371 HNRNPUL2Q1KMD3 747 aaKnown RBP21.18■□□□□ 0.98
CHAF1A-202ENST00000585371 ABCA9Q8IUA7 1624 aa21.15■□□□□ 0.98
CHAF1A-202ENST00000585371 TIAM1Q13009 1591 aa21.15■□□□□ 0.98
CHAF1A-202ENST00000585371 PLEKHD1A6NEE1 506 aa21.15■□□□□ 0.98
CHAF1A-202ENST00000585371 TROQ12816 1431 aaPredicted RBP21.14■□□□□ 0.98
CHAF1A-202ENST00000585371 KIF14Q15058 1648 aa21.13■□□□□ 0.97
CHAF1A-202ENST00000585371 MAP3K1Q13233 1512 aa21.13■□□□□ 0.97
CHAF1A-202ENST00000585371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.11■□□□□ 0.97
CHAF1A-202ENST00000585371 CDK11AQ9UQ88 783 aaPredicted RBP21.09■□□□□ 0.97
CHAF1A-202ENST00000585371 TTC37Q6PGP7 1564 aa21.09■□□□□ 0.97
CHAF1A-202ENST00000585371 ARAP3Q8WWN8 1544 aa21.08■□□□□ 0.96
CHAF1A-202ENST00000585371 PHLDB1Q86UU1 1377 aa21.06■□□□□ 0.96
CHAF1A-202ENST00000585371 EHBP1L1Q8N3D4 1523 aa21.05■□□□□ 0.96
CHAF1A-202ENST00000585371 LRRC9Q6ZRR7 1453 aa21.03■□□□□ 0.96
CHAF1A-202ENST00000585371 MTUS2Q5JR59 1369 aa21.01■□□□□ 0.95
CHAF1A-202ENST00000585371 MYO5CQ9NQX4 1742 aa21.01■□□□□ 0.95
CHAF1A-202ENST00000585371 KANK4Q5T7N3 995 aaPredicted RBP21■□□□□ 0.95
CHAF1A-202ENST00000585371 CDC42BPAQ5VT25 1732 aa21■□□□□ 0.95
CHAF1A-202ENST00000585371 NEO1Q92859 1461 aa20.99■□□□□ 0.95
CHAF1A-202ENST00000585371 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
CHAF1A-202ENST00000585371 HECW2Q9P2P5 1572 aa20.98■□□□□ 0.95
CHAF1A-202ENST00000585371 SUPT6HQ7KZ85 1726 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms