RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-205ENST00000584911 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
LINC00473-205ENST00000584911 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
LINC00473-205ENST00000584911 CCER1Q8TC90 406 aaPredicted RBP18.14■□□□□ 0.49
LINC00473-205ENST00000584911 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
LINC00473-205ENST00000584911 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
LINC00473-205ENST00000584911 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
LINC00473-205ENST00000584911 CYB5RLQ6IPT4 315 aa18.06■□□□□ 0.48
LINC00473-205ENST00000584911 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
LINC00473-205ENST00000584911 GRIN2AQ12879 1464 aa18■□□□□ 0.47
LINC00473-205ENST00000584911 ERICH3Q5RHP9 1530 aa17.99■□□□□ 0.47
LINC00473-205ENST00000584911 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
LINC00473-205ENST00000584911 NUP160Q12769 1436 aa17.95■□□□□ 0.46
LINC00473-205ENST00000584911 CEP170Q5SW79 1584 aa17.93■□□□□ 0.46
LINC00473-205ENST00000584911 ZNF316A6NFI3 1004 aaPredicted RBP17.92■□□□□ 0.46
LINC00473-205ENST00000584911 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
LINC00473-205ENST00000584911 SHROOM2Q13796 1616 aa17.86■□□□□ 0.45
LINC00473-205ENST00000584911 ERCC6L2Q5T890 1561 aa17.85■□□□□ 0.45
LINC00473-205ENST00000584911 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
LINC00473-205ENST00000584911 IGF1RP08069 1367 aa17.8■□□□□ 0.44
LINC00473-205ENST00000584911 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
LINC00473-205ENST00000584911 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
LINC00473-205ENST00000584911 MIER1Q8N108 512 aa17.76■□□□□ 0.43
LINC00473-205ENST00000584911 RUSC2Q8N2Y8 1516 aa17.76■□□□□ 0.43
LINC00473-205ENST00000584911 CUL7Q14999 1698 aa17.76■□□□□ 0.43
LINC00473-205ENST00000584911 JPH4Q96JJ6 628 aa17.74■□□□□ 0.43
LINC00473-205ENST00000584911 PRG4Q92954 1404 aaPredicted RBP17.73■□□□□ 0.43
LINC00473-205ENST00000584911 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
LINC00473-205ENST00000584911 KIAA0586Q9BVV6 1533 aa17.69■□□□□ 0.42
LINC00473-205ENST00000584911 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
LINC00473-205ENST00000584911 CLSPNQ9HAW4 1339 aa17.67■□□□□ 0.42
LINC00473-205ENST00000584911 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
LINC00473-205ENST00000584911 ANP32EQ9BTT0 268 aa17.57■□□□□ 0.4
LINC00473-205ENST00000584911 TNIKQ9UKE5 1360 aa17.57■□□□□ 0.4
LINC00473-205ENST00000584911 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
LINC00473-205ENST00000584911 IQGAP2Q13576 1575 aa17.53■□□□□ 0.4
LINC00473-205ENST00000584911 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
LINC00473-205ENST00000584911 ADCY10Q96PN6 1610 aa17.53■□□□□ 0.4
LINC00473-205ENST00000584911 BCL11AQ9H165 835 aa17.52■□□□□ 0.39
LINC00473-205ENST00000584911 TSHZ2Q9NRE2 1034 aa17.51■□□□□ 0.39
LINC00473-205ENST00000584911 KIF13AQ9H1H9 1805 aa17.49■□□□□ 0.39
LINC00473-205ENST00000584911 MAPKBP1O60336 1514 aa17.49■□□□□ 0.39
LINC00473-205ENST00000584911 CARMIL2Q6F5E8 1435 aa17.48■□□□□ 0.39
LINC00473-205ENST00000584911 PTPRGP23470 1445 aa17.47■□□□□ 0.39
LINC00473-205ENST00000584911 NPM1P06748 294 aaKnown RBP eCLIP17.46■□□□□ 0.39
LINC00473-205ENST00000584911 DISP1Q96F81 1524 aa17.45■□□□□ 0.38
LINC00473-205ENST00000584911 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
LINC00473-205ENST00000584911 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
LINC00473-205ENST00000584911 PRXQ9BXM0 1461 aa17.42■□□□□ 0.38
LINC00473-205ENST00000584911 DIP2BQ9P265 1576 aa17.4■□□□□ 0.38
LINC00473-205ENST00000584911 EEA1Q15075 1411 aa17.4■□□□□ 0.38
LINC00473-205ENST00000584911 FAM69CQ0P6D2 419 aa17.39■□□□□ 0.37
LINC00473-205ENST00000584911 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
LINC00473-205ENST00000584911 UHRF1BP1LA0JNW5 1464 aa17.38■□□□□ 0.37
LINC00473-205ENST00000584911 ABCC2Q92887 1545 aa17.38■□□□□ 0.37
LINC00473-205ENST00000584911 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
LINC00473-205ENST00000584911 UACAQ9BZF9 1416 aa17.36■□□□□ 0.37
LINC00473-205ENST00000584911 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.37
LINC00473-205ENST00000584911 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
LINC00473-205ENST00000584911 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
LINC00473-205ENST00000584911 KDM5BQ9UGL1 1544 aa17.3■□□□□ 0.36
LINC00473-205ENST00000584911 ASXL2Q76L83 1435 aa17.29■□□□□ 0.36
LINC00473-205ENST00000584911 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
LINC00473-205ENST00000584911 UBTFP17480 764 aaKnown RBP17.26■□□□□ 0.35
LINC00473-205ENST00000584911 GLI2P10070 1586 aa17.26■□□□□ 0.35
LINC00473-205ENST00000584911 ZCCHC11Q5TAX3 1644 aaKnown RBP17.24■□□□□ 0.35
LINC00473-205ENST00000584911 TSPOAP1O95153 1857 aa17.23■□□□□ 0.35
LINC00473-205ENST00000584911 ABCA8O94911 1581 aa17.22■□□□□ 0.35
LINC00473-205ENST00000584911 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
LINC00473-205ENST00000584911 PPRC1Q5VV67 1664 aaKnown RBP17.19■□□□□ 0.34
LINC00473-205ENST00000584911 KDM6BO15054 1643 aa17.19■□□□□ 0.34
LINC00473-205ENST00000584911 DHX57Q6P158 1386 aaKnown RBP17.18■□□□□ 0.34
LINC00473-205ENST00000584911 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
LINC00473-205ENST00000584911 SAMD9Q5K651 1589 aa17.16■□□□□ 0.34
LINC00473-205ENST00000584911 KIF21BO75037 1637 aa17.16■□□□□ 0.34
LINC00473-205ENST00000584911 MAP3K4Q9Y6R4 1608 aa17.16■□□□□ 0.34
LINC00473-205ENST00000584911 CLIP1P30622 1438 aa17.16■□□□□ 0.34
LINC00473-205ENST00000584911 WDR7Q9Y4E6 1490 aa17.15■□□□□ 0.34
LINC00473-205ENST00000584911 P3H3Q8IVL6 736 aa17.12■□□□□ 0.33
LINC00473-205ENST00000584911 TEX14Q8IWB6 1497 aa17.08■□□□□ 0.32
LINC00473-205ENST00000584911 RBM19Q9Y4C8 960 aaKnown RBP17.07■□□□□ 0.32
LINC00473-205ENST00000584911 ATP10BO94823 1461 aa17.07■□□□□ 0.32
LINC00473-205ENST00000584911 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
LINC00473-205ENST00000584911 CFAP43Q8NDM7 1665 aa17.05■□□□□ 0.32
LINC00473-205ENST00000584911 RAPGEF6Q8TEU7 1601 aa17.04■□□□□ 0.32
LINC00473-205ENST00000584911 MAGI3Q5TCQ9 1506 aa17.03■□□□□ 0.32
LINC00473-205ENST00000584911 BCANQ96GW7 911 aa17.02■□□□□ 0.32
LINC00473-205ENST00000584911 KCNH8Q96L42 1107 aa17.02■□□□□ 0.32
LINC00473-205ENST00000584911 CD109Q6YHK3 1445 aa17.02■□□□□ 0.32
LINC00473-205ENST00000584911 FKBP8Q14318 412 aa17.02■□□□□ 0.32
LINC00473-205ENST00000584911 APLP2Q06481 763 aa17.01■□□□□ 0.31
LINC00473-205ENST00000584911 FHOD3Q2V2M9 1422 aa17.01■□□□□ 0.31
LINC00473-205ENST00000584911 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
LINC00473-205ENST00000584911 ARID3CA6NKF2 412 aa17■□□□□ 0.31
LINC00473-205ENST00000584911 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
LINC00473-205ENST00000584911 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
LINC00473-205ENST00000584911 KDM4FA0A1W2PPD8 638 aa16.96■□□□□ 0.31
LINC00473-205ENST00000584911 ABCA9Q8IUA7 1624 aa16.95■□□□□ 0.3
LINC00473-205ENST00000584911 MSH5O43196 834 aa16.94■□□□□ 0.3
LINC00473-205ENST00000584911 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
LINC00473-205ENST00000584911 ARAP3Q8WWN8 1544 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms