RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CYB5RLQ6IPT4 315 aa27.46■■□□□ 1.99
ERBB2-222ENST00000584908 ERCC6L2Q5T890 1561 aa27.46■■□□□ 1.99
ERBB2-222ENST00000584908 JPH4Q96JJ6 628 aa27.42■■□□□ 1.98
ERBB2-222ENST00000584908 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
ERBB2-222ENST00000584908 PRXQ9BXM0 1461 aa27.39■■□□□ 1.98
ERBB2-222ENST00000584908 PRG4Q92954 1404 aaPredicted RBP27.39■■□□□ 1.97
ERBB2-222ENST00000584908 EEA1Q15075 1411 aa27.38■■□□□ 1.97
ERBB2-222ENST00000584908 IQGAP2Q13576 1575 aa27.33■■□□□ 1.97
ERBB2-222ENST00000584908 CSRNP3Q8WYN3 585 aa27.29■■□□□ 1.96
ERBB2-222ENST00000584908 CTTNBP2Q8WZ74 1663 aa27.26■■□□□ 1.95
ERBB2-222ENST00000584908 UGGT2Q9NYU1 1516 aa27.2■■□□□ 1.94
ERBB2-222ENST00000584908 CARMIL2Q6F5E8 1435 aa27.16■■□□□ 1.94
ERBB2-222ENST00000584908 DISP1Q96F81 1524 aa27.14■■□□□ 1.94
ERBB2-222ENST00000584908 KIF21BO75037 1637 aa27.12■■□□□ 1.93
ERBB2-222ENST00000584908 TNIKQ9UKE5 1360 aa27.08■■□□□ 1.93
ERBB2-222ENST00000584908 KIAA0556O60303 1618 aa27.07■■□□□ 1.92
ERBB2-222ENST00000584908 FAM9AQ8IZU1 332 aaPredicted RBP27.07■■□□□ 1.92
ERBB2-222ENST00000584908 PTPRGP23470 1445 aa27.05■■□□□ 1.92
ERBB2-222ENST00000584908 ADCY10Q96PN6 1610 aa27.03■■□□□ 1.92
ERBB2-222ENST00000584908 GOLGA3Q08378 1498 aa27.02■■□□□ 1.92
ERBB2-222ENST00000584908 UHRF1BP1LA0JNW5 1464 aa26.93■■□□□ 1.9
ERBB2-222ENST00000584908 SAMD9Q5K651 1589 aa26.91■■□□□ 1.9
ERBB2-222ENST00000584908 MAPKBP1O60336 1514 aa26.9■■□□□ 1.9
ERBB2-222ENST00000584908 UACAQ9BZF9 1416 aa26.89■■□□□ 1.89
ERBB2-222ENST00000584908 ABCC2Q92887 1545 aa26.88■■□□□ 1.89
ERBB2-222ENST00000584908 TRHP20396 242 aaPredicted RBP26.88■■□□□ 1.89
ERBB2-222ENST00000584908 NPM1P06748 294 aaKnown RBP eCLIP26.85■■□□□ 1.89
ERBB2-222ENST00000584908 TTBK1Q5TCY1 1321 aaPredicted RBP26.83■■□□□ 1.89
ERBB2-222ENST00000584908 ABCA8O94911 1581 aa26.8■■□□□ 1.88
ERBB2-222ENST00000584908 KDM5BQ9UGL1 1544 aa26.79■■□□□ 1.88
ERBB2-222ENST00000584908 KIF13AQ9H1H9 1805 aa26.79■■□□□ 1.88
ERBB2-222ENST00000584908 PLB1Q6P1J6 1458 aa26.77■■□□□ 1.88
ERBB2-222ENST00000584908 EFCAB5A4FU69 1503 aa26.77■■□□□ 1.88
ERBB2-222ENST00000584908 ABCC10Q5T3U5 1492 aa26.74■■□□□ 1.87
ERBB2-222ENST00000584908 UBTFP17480 764 aaKnown RBP26.73■■□□□ 1.87
ERBB2-222ENST00000584908 ZCCHC11Q5TAX3 1644 aaKnown RBP26.72■■□□□ 1.87
ERBB2-222ENST00000584908 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
ERBB2-222ENST00000584908 P3H3Q8IVL6 736 aa26.7■■□□□ 1.87
ERBB2-222ENST00000584908 ASXL2Q76L83 1435 aa26.66■■□□□ 1.86
ERBB2-222ENST00000584908 FHOD3Q2V2M9 1422 aa26.66■■□□□ 1.86
ERBB2-222ENST00000584908 EHMT2Q96KQ7 1210 aa26.65■■□□□ 1.86
ERBB2-222ENST00000584908 RAPGEF6Q8TEU7 1601 aa26.64■■□□□ 1.85
ERBB2-222ENST00000584908 RANGAP1P46060 587 aaPredicted RBP26.63■■□□□ 1.85
ERBB2-222ENST00000584908 ARHGAP35Q9NRY4 1499 aa26.6■■□□□ 1.85
ERBB2-222ENST00000584908 FAM69CQ0P6D2 419 aa26.6■■□□□ 1.85
ERBB2-222ENST00000584908 GLI2P10070 1586 aa26.59■■□□□ 1.85
ERBB2-222ENST00000584908 ATP10BO94823 1461 aa26.54■■□□□ 1.84
ERBB2-222ENST00000584908 WDR7Q9Y4E6 1490 aa26.54■■□□□ 1.84
ERBB2-222ENST00000584908 EPRSP07814 1512 aaKnown RBP26.53■■□□□ 1.84
ERBB2-222ENST00000584908 NUP153P49790 1475 aaKnown RBP26.53■■□□□ 1.84
ERBB2-222ENST00000584908 FMN1Q68DA7 1419 aa26.49■■□□□ 1.83
ERBB2-222ENST00000584908 MAP3K4Q9Y6R4 1608 aa26.46■■□□□ 1.83
ERBB2-222ENST00000584908 TSPOAP1O95153 1857 aa26.44■■□□□ 1.82
ERBB2-222ENST00000584908 PPRC1Q5VV67 1664 aaKnown RBP26.43■■□□□ 1.82
ERBB2-222ENST00000584908 CLIP1P30622 1438 aa26.4■■□□□ 1.82
ERBB2-222ENST00000584908 HECW1Q76N89 1606 aa26.38■■□□□ 1.81
ERBB2-222ENST00000584908 CFAP43Q8NDM7 1665 aa26.38■■□□□ 1.81
ERBB2-222ENST00000584908 ARID3CA6NKF2 412 aa26.38■■□□□ 1.81
ERBB2-222ENST00000584908 ABCA9Q8IUA7 1624 aa26.31■■□□□ 1.8
ERBB2-222ENST00000584908 KCNH8Q96L42 1107 aa26.31■■□□□ 1.8
ERBB2-222ENST00000584908 CDK13Q14004 1512 aaKnown RBP26.3■■□□□ 1.8
ERBB2-222ENST00000584908 TEX14Q8IWB6 1497 aa26.29■■□□□ 1.8
ERBB2-222ENST00000584908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.29■■□□□ 1.8
ERBB2-222ENST00000584908 HNRNPUL2Q1KMD3 747 aaKnown RBP26.29■■□□□ 1.8
ERBB2-222ENST00000584908 LRRIQ1Q96JM4 1722 aa26.29■■□□□ 1.8
ERBB2-222ENST00000584908 CASKIN1Q8WXD9 1431 aa26.29■■□□□ 1.8
ERBB2-222ENST00000584908 MAGI3Q5TCQ9 1506 aa26.28■■□□□ 1.8
ERBB2-222ENST00000584908 CD109Q6YHK3 1445 aa26.28■■□□□ 1.8
ERBB2-222ENST00000584908 PCF11O94913 1555 aaKnown RBP26.27■■□□□ 1.8
ERBB2-222ENST00000584908 CEP162Q5TB80 1403 aa26.27■■□□□ 1.8
ERBB2-222ENST00000584908 KDM6BO15054 1643 aa26.26■■□□□ 1.79
ERBB2-222ENST00000584908 PLEKHD1A6NEE1 506 aa26.25■■□□□ 1.79
ERBB2-222ENST00000584908 FYCO1Q9BQS8 1478 aa26.23■■□□□ 1.79
ERBB2-222ENST00000584908 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
ERBB2-222ENST00000584908 CCDC18Q5T9S5 1454 aa26.19■■□□□ 1.78
ERBB2-222ENST00000584908 ATP1B4Q9UN42 357 aaPredicted RBP26.17■■□□□ 1.78
ERBB2-222ENST00000584908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.15■■□□□ 1.78
ERBB2-222ENST00000584908 CDK11AQ9UQ88 783 aaPredicted RBP26.14■■□□□ 1.78
ERBB2-222ENST00000584908 COL17A1Q9UMD9 1497 aaPredicted RBP26.13■■□□□ 1.77
ERBB2-222ENST00000584908 TROQ12816 1431 aaPredicted RBP26.11■■□□□ 1.77
ERBB2-222ENST00000584908 TTC37Q6PGP7 1564 aa26.11■■□□□ 1.77
ERBB2-222ENST00000584908 PHLDB1Q86UU1 1377 aa26.08■■□□□ 1.77
ERBB2-222ENST00000584908 NEO1Q92859 1461 aa26.08■■□□□ 1.76
ERBB2-222ENST00000584908 ARAP3Q8WWN8 1544 aa26.07■■□□□ 1.76
ERBB2-222ENST00000584908 KIF14Q15058 1648 aa26.06■■□□□ 1.76
ERBB2-222ENST00000584908 CFAP74Q9C0B2 1584 aa26.02■■□□□ 1.76
ERBB2-222ENST00000584908 MYO5CQ9NQX4 1742 aa26■■□□□ 1.75
ERBB2-222ENST00000584908 PLCH2O75038 1416 aa25.99■■□□□ 1.75
ERBB2-222ENST00000584908 FANCAO15360 1455 aa25.98■■□□□ 1.75
ERBB2-222ENST00000584908 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
ERBB2-222ENST00000584908 AKNAQ7Z591 1439 aa25.92■■□□□ 1.74
ERBB2-222ENST00000584908 CDC42BPBQ9Y5S2 1711 aa25.9■■□□□ 1.74
ERBB2-222ENST00000584908 FRMPD1Q5SYB0 1578 aa25.89■■□□□ 1.74
ERBB2-222ENST00000584908 PREX2Q70Z35 1606 aa25.89■■□□□ 1.73
ERBB2-222ENST00000584908 RICTORQ6R327 1708 aa25.87■■□□□ 1.73
ERBB2-222ENST00000584908 CDC42BPAQ5VT25 1732 aa25.87■■□□□ 1.73
ERBB2-222ENST00000584908 EHBP1L1Q8N3D4 1523 aa25.87■■□□□ 1.73
ERBB2-222ENST00000584908 TIAM1Q13009 1591 aa25.85■■□□□ 1.73
ERBB2-222ENST00000584908 DENND4BO75064 1496 aaPredicted RBP25.85■■□□□ 1.73
ERBB2-222ENST00000584908 MTUS2Q5JR59 1369 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms