RNA–Protein interactions for RNA: ENST00000584822.1

PHF12-216, Transcript of PHD finger protein 12, humanhuman

TSL 4

Gene PHF12, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-216ENST00000584822 FOXD1Q16676 465 aa13.66□□□□□ -0.22
PHF12-216ENST00000584822 CEP170Q5SW79 1584 aa13.65□□□□□ -0.22
PHF12-216ENST00000584822 JPH4Q96JJ6 628 aa13.63□□□□□ -0.23
PHF12-216ENST00000584822 KIAA0586Q9BVV6 1533 aa13.63□□□□□ -0.23
PHF12-216ENST00000584822 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
PHF12-216ENST00000584822 PRG4Q92954 1404 aaPredicted RBP13.55□□□□□ -0.24
PHF12-216ENST00000584822 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
PHF12-216ENST00000584822 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
PHF12-216ENST00000584822 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
PHF12-216ENST00000584822 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
PHF12-216ENST00000584822 CYB5RLQ6IPT4 315 aa13.52□□□□□ -0.25
PHF12-216ENST00000584822 KIF21BO75037 1637 aa13.52□□□□□ -0.25
PHF12-216ENST00000584822 IQGAP2Q13576 1575 aa13.51□□□□□ -0.25
PHF12-216ENST00000584822 UBTFP17480 764 aaKnown RBP13.49□□□□□ -0.25
PHF12-216ENST00000584822 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
PHF12-216ENST00000584822 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
PHF12-216ENST00000584822 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
PHF12-216ENST00000584822 ERCC6L2Q5T890 1561 aa13.48□□□□□ -0.25
PHF12-216ENST00000584822 UGGT2Q9NYU1 1516 aa13.47□□□□□ -0.25
PHF12-216ENST00000584822 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
PHF12-216ENST00000584822 TNIKQ9UKE5 1360 aa13.44□□□□□ -0.26
PHF12-216ENST00000584822 DISP1Q96F81 1524 aa13.44□□□□□ -0.26
PHF12-216ENST00000584822 CTTNBP2Q8WZ74 1663 aa13.44□□□□□ -0.26
PHF12-216ENST00000584822 PTPRGP23470 1445 aa13.42□□□□□ -0.26
PHF12-216ENST00000584822 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
PHF12-216ENST00000584822 RANGAP1P46060 587 aaPredicted RBP13.39□□□□□ -0.27
PHF12-216ENST00000584822 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
PHF12-216ENST00000584822 KIAA0556O60303 1618 aa13.37□□□□□ -0.27
PHF12-216ENST00000584822 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
PHF12-216ENST00000584822 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
PHF12-216ENST00000584822 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
PHF12-216ENST00000584822 UACAQ9BZF9 1416 aa13.32□□□□□ -0.28
PHF12-216ENST00000584822 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
PHF12-216ENST00000584822 EFCAB5A4FU69 1503 aa13.31□□□□□ -0.28
PHF12-216ENST00000584822 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
PHF12-216ENST00000584822 FHOD3Q2V2M9 1422 aa13.29□□□□□ -0.28
PHF12-216ENST00000584822 ARHGAP35Q9NRY4 1499 aa13.29□□□□□ -0.28
PHF12-216ENST00000584822 CLIP1P30622 1438 aa13.26□□□□□ -0.29
PHF12-216ENST00000584822 PLB1Q6P1J6 1458 aa13.26□□□□□ -0.29
PHF12-216ENST00000584822 ADCY10Q96PN6 1610 aa13.25□□□□□ -0.29
PHF12-216ENST00000584822 ABCC2Q92887 1545 aa13.25□□□□□ -0.29
PHF12-216ENST00000584822 ABCA8O94911 1581 aa13.24□□□□□ -0.29
PHF12-216ENST00000584822 FMN1Q68DA7 1419 aa13.23□□□□□ -0.29
PHF12-216ENST00000584822 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
PHF12-216ENST00000584822 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
PHF12-216ENST00000584822 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
PHF12-216ENST00000584822 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
PHF12-216ENST00000584822 ATP10BO94823 1461 aa13.17□□□□□ -0.3
PHF12-216ENST00000584822 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
PHF12-216ENST00000584822 ASXL2Q76L83 1435 aa13.16□□□□□ -0.3
PHF12-216ENST00000584822 ARID3CA6NKF2 412 aa13.16□□□□□ -0.3
PHF12-216ENST00000584822 ATP1B4Q9UN42 357 aaPredicted RBP13.16□□□□□ -0.3
PHF12-216ENST00000584822 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
PHF12-216ENST00000584822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
PHF12-216ENST00000584822 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
PHF12-216ENST00000584822 CASKIN1Q8WXD9 1431 aa13.13□□□□□ -0.31
PHF12-216ENST00000584822 ABCC10Q5T3U5 1492 aa13.13□□□□□ -0.31
PHF12-216ENST00000584822 FAM69CQ0P6D2 419 aa13.13□□□□□ -0.31
PHF12-216ENST00000584822 ZCCHC11Q5TAX3 1644 aaKnown RBP13.13□□□□□ -0.31
PHF12-216ENST00000584822 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
PHF12-216ENST00000584822 KCNH8Q96L42 1107 aa13.1□□□□□ -0.31
PHF12-216ENST00000584822 CDK11AQ9UQ88 783 aaPredicted RBP13.1□□□□□ -0.31
PHF12-216ENST00000584822 WDR7Q9Y4E6 1490 aa13.1□□□□□ -0.31
PHF12-216ENST00000584822 EPRSP07814 1512 aaKnown RBP13.09□□□□□ -0.31
PHF12-216ENST00000584822 HECW1Q76N89 1606 aa13.09□□□□□ -0.31
PHF12-216ENST00000584822 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
PHF12-216ENST00000584822 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
PHF12-216ENST00000584822 DIP2BQ9P265 1576 aa13.06□□□□□ -0.32
PHF12-216ENST00000584822 CCDC18Q5T9S5 1454 aa13.05□□□□□ -0.32
PHF12-216ENST00000584822 CDK13Q14004 1512 aaKnown RBP13.05□□□□□ -0.32
PHF12-216ENST00000584822 PCF11O94913 1555 aaKnown RBP13.05□□□□□ -0.32
PHF12-216ENST00000584822 GLI2P10070 1586 aa13.05□□□□□ -0.32
PHF12-216ENST00000584822 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
PHF12-216ENST00000584822 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
PHF12-216ENST00000584822 TROQ12816 1431 aaPredicted RBP13□□□□□ -0.33
PHF12-216ENST00000584822 CD109Q6YHK3 1445 aa12.99□□□□□ -0.33
PHF12-216ENST00000584822 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
PHF12-216ENST00000584822 ADRA2BP18089 450 aa12.97□□□□□ -0.33
PHF12-216ENST00000584822 APLP2Q06481 763 aa12.96□□□□□ -0.33
PHF12-216ENST00000584822 MAGI3Q5TCQ9 1506 aa12.96□□□□□ -0.33
PHF12-216ENST00000584822 MTUS2Q5JR59 1369 aa12.95□□□□□ -0.34
PHF12-216ENST00000584822 MAP3K4Q9Y6R4 1608 aa12.95□□□□□ -0.34
PHF12-216ENST00000584822 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
PHF12-216ENST00000584822 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
PHF12-216ENST00000584822 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
PHF12-216ENST00000584822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.34
PHF12-216ENST00000584822 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
PHF12-216ENST00000584822 PHLDB1Q86UU1 1377 aa12.92□□□□□ -0.34
PHF12-216ENST00000584822 TIAM1Q13009 1591 aa12.91□□□□□ -0.34
PHF12-216ENST00000584822 PLCH2O75038 1416 aa12.91□□□□□ -0.34
PHF12-216ENST00000584822 KIF14Q15058 1648 aa12.91□□□□□ -0.34
PHF12-216ENST00000584822 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
PHF12-216ENST00000584822 EFCAB2Q5VUJ9 269 aa12.9□□□□□ -0.34
PHF12-216ENST00000584822 TSPOAP1O95153 1857 aa12.9□□□□□ -0.34
PHF12-216ENST00000584822 LRRC9Q6ZRR7 1453 aa12.9□□□□□ -0.34
PHF12-216ENST00000584822 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
PHF12-216ENST00000584822 TTC37Q6PGP7 1564 aa12.88□□□□□ -0.35
PHF12-216ENST00000584822 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
PHF12-216ENST00000584822 NEO1Q92859 1461 aa12.87□□□□□ -0.35
PHF12-216ENST00000584822 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms