RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 IGF1RP08069 1367 aa35.5■■■■□ 3.27
TOP3A-218ENST00000584669 CUL7Q14999 1698 aa35.49■■■■□ 3.27
TOP3A-218ENST00000584669 KIAA0586Q9BVV6 1533 aa35.32■■■■□ 3.25
TOP3A-218ENST00000584669 CARMIL1Q5VZK9 1371 aa35.3■■■■□ 3.24
TOP3A-218ENST00000584669 NPM1P06748 294 aaKnown RBP eCLIP35.15■■■■□ 3.22
TOP3A-218ENST00000584669 TTBK1Q5TCY1 1321 aaPredicted RBP35.09■■■■□ 3.21
TOP3A-218ENST00000584669 ADCY10Q96PN6 1610 aa35.09■■■■□ 3.21
TOP3A-218ENST00000584669 RAPGEF2Q9Y4G8 1499 aa35.07■■■■□ 3.2
TOP3A-218ENST00000584669 KIF13AQ9H1H9 1805 aa35.06■■■■□ 3.2
TOP3A-218ENST00000584669 IQGAP2Q13576 1575 aa35.04■■■■□ 3.2
TOP3A-218ENST00000584669 PTPRGP23470 1445 aa35.02■■■■□ 3.2
TOP3A-218ENST00000584669 CARMIL2Q6F5E8 1435 aa35.01■■■■□ 3.2
TOP3A-218ENST00000584669 FAM69CQ0P6D2 419 aa34.99■■■■□ 3.19
TOP3A-218ENST00000584669 MAPKBP1O60336 1514 aa34.98■■■■□ 3.19
TOP3A-218ENST00000584669 TNIKQ9UKE5 1360 aa34.95■■■■□ 3.19
TOP3A-218ENST00000584669 ABCC10Q5T3U5 1492 aa34.95■■■■□ 3.19
TOP3A-218ENST00000584669 CTTNBP2Q8WZ74 1663 aa34.91■■■■□ 3.18
TOP3A-218ENST00000584669 PRXQ9BXM0 1461 aa34.9■■■■□ 3.18
TOP3A-218ENST00000584669 CHIC1Q5VXU3 224 aa34.9■■■■□ 3.18
TOP3A-218ENST00000584669 DIP2BQ9P265 1576 aa34.87■■■■□ 3.17
TOP3A-218ENST00000584669 DISP1Q96F81 1524 aa34.83■■■■□ 3.17
TOP3A-218ENST00000584669 AEBP2Q6ZN18 517 aaPredicted RBP34.8■■■■□ 3.16
TOP3A-218ENST00000584669 CSRNP3Q8WYN3 585 aa34.8■■■■□ 3.16
TOP3A-218ENST00000584669 EEA1Q15075 1411 aa34.8■■■■□ 3.16
TOP3A-218ENST00000584669 ABCC2Q92887 1545 aa34.78■■■■□ 3.16
TOP3A-218ENST00000584669 UGGT2Q9NYU1 1516 aa34.78■■■■□ 3.16
TOP3A-218ENST00000584669 UACAQ9BZF9 1416 aa34.73■■■■□ 3.15
TOP3A-218ENST00000584669 FAM9AQ8IZU1 332 aaPredicted RBP34.73■■■■□ 3.15
TOP3A-218ENST00000584669 KIAA0556O60303 1618 aa34.71■■■■□ 3.15
TOP3A-218ENST00000584669 UHRF1BP1LA0JNW5 1464 aa34.7■■■■□ 3.15
TOP3A-218ENST00000584669 TSPOAP1O95153 1857 aa34.69■■■■□ 3.14
TOP3A-218ENST00000584669 ASXL2Q76L83 1435 aa34.67■■■■□ 3.14
TOP3A-218ENST00000584669 PLB1Q6P1J6 1458 aa34.63■■■■□ 3.13
TOP3A-218ENST00000584669 KDM6BO15054 1643 aa34.57■■■■□ 3.12
TOP3A-218ENST00000584669 KIF21BO75037 1637 aa34.56■■■■□ 3.12
TOP3A-218ENST00000584669 GOLGA3Q08378 1498 aa34.56■■■■□ 3.12
TOP3A-218ENST00000584669 KDM5BQ9UGL1 1544 aa34.55■■■■□ 3.12
TOP3A-218ENST00000584669 ZCCHC11Q5TAX3 1644 aaKnown RBP34.51■■■■□ 3.11
TOP3A-218ENST00000584669 GLI2P10070 1586 aa34.49■■■■□ 3.11
TOP3A-218ENST00000584669 EPRSP07814 1512 aaKnown RBP34.43■■■■□ 3.1
TOP3A-218ENST00000584669 PPRC1Q5VV67 1664 aaKnown RBP34.39■■■■□ 3.1
TOP3A-218ENST00000584669 ABCA8O94911 1581 aa34.36■■■■□ 3.09
TOP3A-218ENST00000584669 SAMD9Q5K651 1589 aa34.36■■■■□ 3.09
TOP3A-218ENST00000584669 P3H3Q8IVL6 736 aa34.36■■■■□ 3.09
TOP3A-218ENST00000584669 WDR7Q9Y4E6 1490 aa34.35■■■■□ 3.09
TOP3A-218ENST00000584669 EHMT2Q96KQ7 1210 aa34.34■■■■□ 3.09
TOP3A-218ENST00000584669 MAP3K4Q9Y6R4 1608 aa34.32■■■■□ 3.08
TOP3A-218ENST00000584669 ARID3CA6NKF2 412 aa34.26■■■■□ 3.08
TOP3A-218ENST00000584669 RANGAP1P46060 587 aaPredicted RBP34.26■■■■□ 3.08
TOP3A-218ENST00000584669 TEX14Q8IWB6 1497 aa34.26■■■■□ 3.07
TOP3A-218ENST00000584669 KCNH8Q96L42 1107 aa34.25■■■■□ 3.07
TOP3A-218ENST00000584669 UBTFP17480 764 aaKnown RBP34.19■■■■□ 3.06
TOP3A-218ENST00000584669 COL17A1Q9UMD9 1497 aaPredicted RBP34.16■■■■□ 3.06
TOP3A-218ENST00000584669 CD109Q6YHK3 1445 aa34.13■■■■□ 3.05
TOP3A-218ENST00000584669 KDM4FA0A1W2PPD8 638 aa34.13■■■■□ 3.05
TOP3A-218ENST00000584669 EFCAB5A4FU69 1503 aa34.12■■■■□ 3.05
TOP3A-218ENST00000584669 FHOD3Q2V2M9 1422 aa34.12■■■■□ 3.05
TOP3A-218ENST00000584669 CFAP43Q8NDM7 1665 aa34.09■■■■□ 3.05
TOP3A-218ENST00000584669 ATP10BO94823 1461 aa34.09■■■■□ 3.05
TOP3A-218ENST00000584669 RAPGEF6Q8TEU7 1601 aa34.08■■■■□ 3.05
TOP3A-218ENST00000584669 MAGI3Q5TCQ9 1506 aa34.04■■■■□ 3.04
TOP3A-218ENST00000584669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.02■■■■□ 3.04
TOP3A-218ENST00000584669 HNRNPUL2Q1KMD3 747 aaKnown RBP34.02■■■■□ 3.04
TOP3A-218ENST00000584669 ARHGAP35Q9NRY4 1499 aa33.95■■■■□ 3.03
TOP3A-218ENST00000584669 ADGRL1O94910 1474 aa33.95■■■■□ 3.02
TOP3A-218ENST00000584669 NUP153P49790 1475 aaKnown RBP33.92■■■■□ 3.02
TOP3A-218ENST00000584669 ABCA9Q8IUA7 1624 aa33.86■■■■□ 3.01
TOP3A-218ENST00000584669 ARAP3Q8WWN8 1544 aa33.77■■■■□ 3
TOP3A-218ENST00000584669 PLEKHD1A6NEE1 506 aa33.76■■■□□ 2.99
TOP3A-218ENST00000584669 FMN1Q68DA7 1419 aa33.76■■■□□ 2.99
TOP3A-218ENST00000584669 HECW1Q76N89 1606 aa33.71■■■□□ 2.99
TOP3A-218ENST00000584669 PHLDB1Q86UU1 1377 aa33.71■■■□□ 2.99
TOP3A-218ENST00000584669 CDK13Q14004 1512 aaKnown RBP33.69■■■□□ 2.98
TOP3A-218ENST00000584669 LRRIQ1Q96JM4 1722 aa33.69■■■□□ 2.98
TOP3A-218ENST00000584669 NEO1Q92859 1461 aa33.69■■■□□ 2.98
TOP3A-218ENST00000584669 ATP1B4Q9UN42 357 aaPredicted RBP33.67■■■□□ 2.98
TOP3A-218ENST00000584669 RAPGEF3O95398 923 aa33.66■■■□□ 2.98
TOP3A-218ENST00000584669 CLIP1P30622 1438 aa33.66■■■□□ 2.98
TOP3A-218ENST00000584669 PCF11O94913 1555 aaKnown RBP33.61■■■□□ 2.97
TOP3A-218ENST00000584669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.58■■■□□ 2.97
TOP3A-218ENST00000584669 TTC37Q6PGP7 1564 aa33.55■■■□□ 2.96
TOP3A-218ENST00000584669 FRMPD1Q5SYB0 1578 aa33.53■■■□□ 2.96
TOP3A-218ENST00000584669 FANCAO15360 1455 aa33.52■■■□□ 2.96
TOP3A-218ENST00000584669 LOC105371045A0A1W2PR82 267 aa33.52■■■□□ 2.96
TOP3A-218ENST00000584669 CASKIN1Q8WXD9 1431 aa33.51■■■□□ 2.95
TOP3A-218ENST00000584669 AKNAQ7Z591 1439 aa33.5■■■□□ 2.95
TOP3A-218ENST00000584669 CEP162Q5TB80 1403 aa33.49■■■□□ 2.95
TOP3A-218ENST00000584669 CFAP74Q9C0B2 1584 aa33.49■■■□□ 2.95
TOP3A-218ENST00000584669 DENND4BO75064 1496 aaPredicted RBP33.49■■■□□ 2.95
TOP3A-218ENST00000584669 ARID4BQ4LE39 1312 aaPredicted RBP33.44■■■□□ 2.94
TOP3A-218ENST00000584669 FYCO1Q9BQS8 1478 aa33.44■■■□□ 2.94
TOP3A-218ENST00000584669 CDK11AQ9UQ88 783 aaPredicted RBP33.43■■■□□ 2.94
TOP3A-218ENST00000584669 HECW2Q9P2P5 1572 aa33.42■■■□□ 2.94
TOP3A-218ENST00000584669 RICTORQ6R327 1708 aa33.4■■■□□ 2.94
TOP3A-218ENST00000584669 KIF14Q15058 1648 aa33.39■■■□□ 2.94
TOP3A-218ENST00000584669 CCDC18Q5T9S5 1454 aa33.38■■■□□ 2.93
TOP3A-218ENST00000584669 ARHGEF40Q8TER5 1519 aa33.38■■■□□ 2.93
TOP3A-218ENST00000584669 PLCH2O75038 1416 aa33.36■■■□□ 2.93
TOP3A-218ENST00000584669 TROQ12816 1431 aaPredicted RBP33.35■■■□□ 2.93
TOP3A-218ENST00000584669 MYO5CQ9NQX4 1742 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms