RNA–Protein interactions for RNA: ENST00000584496.1

GRIN2C-205, Transcript of glutamate ionotropic receptor NMDA type subunit 2C, humanhuman

TSL 1 (best)

Gene GRIN2C, Length 1,984 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2C-205ENST00000584496 CFAP43Q8NDM7 1665 aa32.92■■■□□ 2.86
GRIN2C-205ENST00000584496 EFCAB5A4FU69 1503 aa32.91■■■□□ 2.86
GRIN2C-205ENST00000584496 PCF11O94913 1555 aaKnown RBP32.9■■■□□ 2.86
GRIN2C-205ENST00000584496 ZNF316A6NFI3 1004 aaPredicted RBP32.9■■■□□ 2.86
GRIN2C-205ENST00000584496 DHX57Q6P158 1386 aaKnown RBP32.89■■■□□ 2.86
GRIN2C-205ENST00000584496 LRRC9Q6ZRR7 1453 aa32.89■■■□□ 2.85
GRIN2C-205ENST00000584496 KIF21AQ7Z4S6 1674 aa32.88■■■□□ 2.85
GRIN2C-205ENST00000584496 CLSPNQ9HAW4 1339 aa32.87■■■□□ 2.85
GRIN2C-205ENST00000584496 FHOD3Q2V2M9 1422 aa32.8■■■□□ 2.84
GRIN2C-205ENST00000584496 AQRO60306 1485 aaKnown RBP eCLIP32.78■■■□□ 2.84
GRIN2C-205ENST00000584496 FYCO1Q9BQS8 1478 aa32.77■■■□□ 2.84
GRIN2C-205ENST00000584496 GAPVD1Q14C86 1478 aa32.77■■■□□ 2.84
GRIN2C-205ENST00000584496 TDRD9Q8NDG6 1382 aaKnown RBP32.75■■■□□ 2.83
GRIN2C-205ENST00000584496 TARBP1Q13395 1621 aaKnown RBP32.74■■■□□ 2.83
GRIN2C-205ENST00000584496 P3H3Q8IVL6 736 aa32.73■■■□□ 2.83
GRIN2C-205ENST00000584496 CASKIN1Q8WXD9 1431 aa32.73■■■□□ 2.83
GRIN2C-205ENST00000584496 PHLDB1Q86UU1 1377 aa32.7■■■□□ 2.83
GRIN2C-205ENST00000584496 SAMD9Q5K651 1589 aa32.67■■■□□ 2.82
GRIN2C-205ENST00000584496 SNAPC4Q5SXM2 1469 aa32.62■■■□□ 2.81
GRIN2C-205ENST00000584496 FMN1Q68DA7 1419 aa32.61■■■□□ 2.81
GRIN2C-205ENST00000584496 SCAF1Q9H7N4 1312 aaKnown RBP32.56■■■□□ 2.8
GRIN2C-205ENST00000584496 ITGAEP38570 1179 aa32.54■■■□□ 2.8
GRIN2C-205ENST00000584496 RAB3GAP2Q9H2M9 1393 aa32.54■■■□□ 2.8
GRIN2C-205ENST00000584496 PBRM1Q86U86 1689 aa32.54■■■□□ 2.8
GRIN2C-205ENST00000584496 MRC2Q9UBG0 1479 aa32.49■■■□□ 2.79
GRIN2C-205ENST00000584496 LRRIQ1Q96JM4 1722 aa32.49■■■□□ 2.79
GRIN2C-205ENST00000584496 ATP1B4Q9UN42 357 aaPredicted RBP32.49■■■□□ 2.79
GRIN2C-205ENST00000584496 SETD5Q9C0A6 1442 aa32.47■■■□□ 2.79
GRIN2C-205ENST00000584496 ACIN1Q9UKV3 1341 aaKnown RBP32.46■■■□□ 2.79
GRIN2C-205ENST00000584496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.46■■■□□ 2.79
GRIN2C-205ENST00000584496 GRIN2BQ13224 1484 aa32.45■■■□□ 2.79
GRIN2C-205ENST00000584496 MAPKBP1O60336 1514 aa32.45■■■□□ 2.79
GRIN2C-205ENST00000584496 THOC2Q8NI27 1593 aaKnown RBP32.44■■■□□ 2.78
GRIN2C-205ENST00000584496 ADAMTS12P58397 1594 aa32.42■■■□□ 2.78
GRIN2C-205ENST00000584496 NEUROD1Q13562 356 aa32.39■■■□□ 2.78
GRIN2C-205ENST00000584496 FAM50AQ14320 339 aaKnown RBP32.39■■■□□ 2.78
GRIN2C-205ENST00000584496 FGD6Q6ZV73 1430 aa32.33■■■□□ 2.77
GRIN2C-205ENST00000584496 MIER1Q8N108 512 aa32.31■■■□□ 2.76
GRIN2C-205ENST00000584496 ERCC6Q03468 1493 aa32.31■■■□□ 2.76
GRIN2C-205ENST00000584496 CENPBP07199 599 aaPredicted RBP32.3■■■□□ 2.76
GRIN2C-205ENST00000584496 WDR62O43379 1518 aa32.3■■■□□ 2.76
GRIN2C-205ENST00000584496 IQGAP2Q13576 1575 aa32.3■■■□□ 2.76
GRIN2C-205ENST00000584496 MTUS2Q5JR59 1369 aa32.28■■■□□ 2.76
GRIN2C-205ENST00000584496 EHBP1L1Q8N3D4 1523 aa32.25■■■□□ 2.75
GRIN2C-205ENST00000584496 IFT140Q96RY7 1462 aa32.25■■■□□ 2.75
GRIN2C-205ENST00000584496 SUPT6HQ7KZ85 1726 aaKnown RBP32.23■■■□□ 2.75
GRIN2C-205ENST00000584496 NCOA2Q15596 1464 aa32.23■■■□□ 2.75
GRIN2C-205ENST00000584496 ARHGEF11O15085 1522 aa32.2■■■□□ 2.74
GRIN2C-205ENST00000584496 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
GRIN2C-205ENST00000584496 CCDC18Q5T9S5 1454 aa32.19■■■□□ 2.74
GRIN2C-205ENST00000584496 MAGI3Q5TCQ9 1506 aa32.18■■■□□ 2.74
GRIN2C-205ENST00000584496 HECW1Q76N89 1606 aa32.17■■■□□ 2.74
GRIN2C-205ENST00000584496 MYOM3Q5VTT5 1437 aa32.17■■■□□ 2.74
GRIN2C-205ENST00000584496 UGGT2Q9NYU1 1516 aa32.16■■■□□ 2.74
GRIN2C-205ENST00000584496 PTPRKQ15262 1439 aa32.13■■■□□ 2.73
GRIN2C-205ENST00000584496 HFM1A2PYH4 1435 aa32.08■■■□□ 2.73
GRIN2C-205ENST00000584496 PTPN23Q9H3S7 1636 aa32.07■■■□□ 2.72
GRIN2C-205ENST00000584496 EPRSP07814 1512 aaKnown RBP32.06■■■□□ 2.72
GRIN2C-205ENST00000584496 EIF4G3O43432 1585 aaKnown RBP32.05■■■□□ 2.72
GRIN2C-205ENST00000584496 KIAA0586Q9BVV6 1533 aa32.02■■■□□ 2.72
GRIN2C-205ENST00000584496 TCOF1Q13428 1488 aaKnown RBP32.01■■■□□ 2.71
GRIN2C-205ENST00000584496 SIN3AQ96ST3 1273 aa32.01■■■□□ 2.71
GRIN2C-205ENST00000584496 KIAA0556O60303 1618 aa31.98■■■□□ 2.71
GRIN2C-205ENST00000584496 CDK13Q14004 1512 aaKnown RBP31.97■■■□□ 2.71
GRIN2C-205ENST00000584496 NAIPQ13075 1403 aa31.97■■■□□ 2.71
GRIN2C-205ENST00000584496 DISP1Q96F81 1524 aa31.97■■■□□ 2.71
GRIN2C-205ENST00000584496 YTHDC1Q96MU7 727 aaKnown RBP31.97■■■□□ 2.71
GRIN2C-205ENST00000584496 TIMELESSQ9UNS1 1208 aa31.97■■■□□ 2.71
GRIN2C-205ENST00000584496 GTF3C3Q9Y5Q9 886 aa31.97■■■□□ 2.71
GRIN2C-205ENST00000584496 GRIN2AQ12879 1464 aa31.96■■■□□ 2.71
GRIN2C-205ENST00000584496 UACAQ9BZF9 1416 aa31.94■■■□□ 2.7
GRIN2C-205ENST00000584496 MAGI1Q96QZ7 1491 aaPredicted RBP31.86■■■□□ 2.69
GRIN2C-205ENST00000584496 GCC2Q8IWJ2 1684 aa31.86■■■□□ 2.69
GRIN2C-205ENST00000584496 MIA2Q96PC5 1412 aa31.86■■■□□ 2.69
GRIN2C-205ENST00000584496 RAPGEF6Q8TEU7 1601 aa31.81■■■□□ 2.68
GRIN2C-205ENST00000584496 AKNAQ7Z591 1439 aa31.81■■■□□ 2.68
GRIN2C-205ENST00000584496 NUP153P49790 1475 aaKnown RBP31.8■■■□□ 2.68
GRIN2C-205ENST00000584496 CEP170Q5SW79 1584 aa31.79■■■□□ 2.68
GRIN2C-205ENST00000584496 PPP1R15AO75807 674 aaPredicted RBP31.78■■■□□ 2.68
GRIN2C-205ENST00000584496 SYNJ2O15056 1496 aa31.77■■■□□ 2.68
GRIN2C-205ENST00000584496 ARID3CA6NKF2 412 aa31.69■■■□□ 2.66
GRIN2C-205ENST00000584496 KDM6BO15054 1643 aa31.69■■■□□ 2.66
GRIN2C-205ENST00000584496 NUP160Q12769 1436 aa31.66■■■□□ 2.66
GRIN2C-205ENST00000584496 RRP7BPQ9NSQ0 103 aa31.66■■■□□ 2.66
GRIN2C-205ENST00000584496 DENND4BO75064 1496 aaPredicted RBP31.66■■■□□ 2.66
GRIN2C-205ENST00000584496 TONSLQ96HA7 1378 aa31.65■■■□□ 2.66
GRIN2C-205ENST00000584496 KDM5BQ9UGL1 1544 aa31.64■■■□□ 2.66
GRIN2C-205ENST00000584496 CHMP7Q8WUX9 453 aaPredicted RBP31.63■■■□□ 2.65
GRIN2C-205ENST00000584496 CHIC2Q9UKJ5 165 aa31.63■■■□□ 2.65
GRIN2C-205ENST00000584496 DNMT1P26358 1616 aaKnown RBP31.62■■■□□ 2.65
GRIN2C-205ENST00000584496 DAPK1P53355 1430 aa31.59■■■□□ 2.65
GRIN2C-205ENST00000584496 ROCK1Q13464 1354 aa31.57■■■□□ 2.64
GRIN2C-205ENST00000584496 PLB1Q6P1J6 1458 aa31.55■■■□□ 2.64
GRIN2C-205ENST00000584496 TROQ12816 1431 aaPredicted RBP31.55■■■□□ 2.64
GRIN2C-205ENST00000584496 ABCC5O15440 1437 aa31.54■■■□□ 2.64
GRIN2C-205ENST00000584496 ADCY10Q96PN6 1610 aa31.54■■■□□ 2.64
GRIN2C-205ENST00000584496 CDK11AQ9UQ88 783 aaPredicted RBP31.53■■■□□ 2.64
GRIN2C-205ENST00000584496 PRG4Q92954 1404 aaPredicted RBP31.51■■■□□ 2.63
GRIN2C-205ENST00000584496 CARMIL2Q6F5E8 1435 aa31.5■■■□□ 2.63
GRIN2C-205ENST00000584496 ITSN2Q9NZM3 1697 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms