RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 PRG4Q92954 1404 aaPredicted RBP23.4■■□□□ 1.34
CDK5RAP3-233ENST00000584186 RUSC2Q8N2Y8 1516 aa23.37■■□□□ 1.33
CDK5RAP3-233ENST00000584186 CARMIL1Q5VZK9 1371 aa23.35■■□□□ 1.33
CDK5RAP3-233ENST00000584186 KIAA0586Q9BVV6 1533 aa23.29■■□□□ 1.32
CDK5RAP3-233ENST00000584186 RAPGEF2Q9Y4G8 1499 aa23.16■■□□□ 1.3
CDK5RAP3-233ENST00000584186 TTBK1Q5TCY1 1321 aaPredicted RBP23.15■■□□□ 1.3
CDK5RAP3-233ENST00000584186 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
CDK5RAP3-233ENST00000584186 NPM1P06748 294 aaKnown RBP eCLIP23.11■■□□□ 1.29
CDK5RAP3-233ENST00000584186 CARMIL2Q6F5E8 1435 aa23.09■■□□□ 1.29
CDK5RAP3-233ENST00000584186 PTPRGP23470 1445 aa23.07■■□□□ 1.28
CDK5RAP3-233ENST00000584186 ADCY10Q96PN6 1610 aa23.05■■□□□ 1.28
CDK5RAP3-233ENST00000584186 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
CDK5RAP3-233ENST00000584186 DISP1Q96F81 1524 aa22.98■■□□□ 1.27
CDK5RAP3-233ENST00000584186 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
CDK5RAP3-233ENST00000584186 PRXQ9BXM0 1461 aa22.96■■□□□ 1.27
CDK5RAP3-233ENST00000584186 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
CDK5RAP3-233ENST00000584186 MAPKBP1O60336 1514 aa22.95■■□□□ 1.26
CDK5RAP3-233ENST00000584186 KIF13AQ9H1H9 1805 aa22.94■■□□□ 1.26
CDK5RAP3-233ENST00000584186 CTTNBP2Q8WZ74 1663 aa22.92■■□□□ 1.26
CDK5RAP3-233ENST00000584186 ABCC10Q5T3U5 1492 aa22.92■■□□□ 1.26
CDK5RAP3-233ENST00000584186 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
CDK5RAP3-233ENST00000584186 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
CDK5RAP3-233ENST00000584186 UACAQ9BZF9 1416 aa22.88■■□□□ 1.25
CDK5RAP3-233ENST00000584186 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
CDK5RAP3-233ENST00000584186 DIP2BQ9P265 1576 aa22.86■■□□□ 1.25
CDK5RAP3-233ENST00000584186 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
CDK5RAP3-233ENST00000584186 UHRF1BP1LA0JNW5 1464 aa22.84■■□□□ 1.25
CDK5RAP3-233ENST00000584186 GOLGA3Q08378 1498 aa22.83■■□□□ 1.25
CDK5RAP3-233ENST00000584186 EEA1Q15075 1411 aa22.81■■□□□ 1.24
CDK5RAP3-233ENST00000584186 ASXL2Q76L83 1435 aa22.79■■□□□ 1.24
CDK5RAP3-233ENST00000584186 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
CDK5RAP3-233ENST00000584186 PLB1Q6P1J6 1458 aa22.75■■□□□ 1.23
CDK5RAP3-233ENST00000584186 KDM5BQ9UGL1 1544 aa22.74■■□□□ 1.23
CDK5RAP3-233ENST00000584186 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
CDK5RAP3-233ENST00000584186 TSPOAP1O95153 1857 aa22.73■■□□□ 1.23
CDK5RAP3-233ENST00000584186 RANGAP1P46060 587 aaPredicted RBP22.72■■□□□ 1.23
CDK5RAP3-233ENST00000584186 ZCCHC11Q5TAX3 1644 aaKnown RBP22.71■■□□□ 1.23
CDK5RAP3-233ENST00000584186 ABCA8O94911 1581 aa22.65■■□□□ 1.22
CDK5RAP3-233ENST00000584186 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
CDK5RAP3-233ENST00000584186 GLI2P10070 1586 aa22.63■■□□□ 1.21
CDK5RAP3-233ENST00000584186 EPRSP07814 1512 aaKnown RBP22.63■■□□□ 1.21
CDK5RAP3-233ENST00000584186 ARID3CA6NKF2 412 aa22.63■■□□□ 1.21
CDK5RAP3-233ENST00000584186 KDM6BO15054 1643 aa22.62■■□□□ 1.21
CDK5RAP3-233ENST00000584186 SAMD9Q5K651 1589 aa22.6■■□□□ 1.21
CDK5RAP3-233ENST00000584186 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
CDK5RAP3-233ENST00000584186 KIF21BO75037 1637 aa22.6■■□□□ 1.21
CDK5RAP3-233ENST00000584186 WDR7Q9Y4E6 1490 aa22.6■■□□□ 1.21
CDK5RAP3-233ENST00000584186 KCNH8Q96L42 1107 aa22.58■■□□□ 1.21
CDK5RAP3-233ENST00000584186 PPRC1Q5VV67 1664 aaKnown RBP22.55■■□□□ 1.2
CDK5RAP3-233ENST00000584186 UBTFP17480 764 aaKnown RBP22.54■■□□□ 1.2
CDK5RAP3-233ENST00000584186 MAP3K4Q9Y6R4 1608 aa22.53■■□□□ 1.2
CDK5RAP3-233ENST00000584186 FHOD3Q2V2M9 1422 aa22.53■■□□□ 1.2
CDK5RAP3-233ENST00000584186 ATP10BO94823 1461 aa22.5■■□□□ 1.19
CDK5RAP3-233ENST00000584186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
CDK5RAP3-233ENST00000584186 HNRNPUL2Q1KMD3 747 aaKnown RBP22.5■■□□□ 1.19
CDK5RAP3-233ENST00000584186 RAPGEF6Q8TEU7 1601 aa22.49■■□□□ 1.19
CDK5RAP3-233ENST00000584186 TEX14Q8IWB6 1497 aa22.48■■□□□ 1.19
CDK5RAP3-233ENST00000584186 CD109Q6YHK3 1445 aa22.46■■□□□ 1.19
CDK5RAP3-233ENST00000584186 EFCAB5A4FU69 1503 aa22.44■■□□□ 1.18
CDK5RAP3-233ENST00000584186 NUP153P49790 1475 aaKnown RBP22.41■■□□□ 1.18
CDK5RAP3-233ENST00000584186 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
CDK5RAP3-233ENST00000584186 CFAP43Q8NDM7 1665 aa22.4■■□□□ 1.18
CDK5RAP3-233ENST00000584186 MAGI3Q5TCQ9 1506 aa22.37■■□□□ 1.17
CDK5RAP3-233ENST00000584186 ATP1B4Q9UN42 357 aaPredicted RBP22.33■■□□□ 1.17
CDK5RAP3-233ENST00000584186 PLEKHD1A6NEE1 506 aa22.32■■□□□ 1.16
CDK5RAP3-233ENST00000584186 ARHGAP35Q9NRY4 1499 aa22.3■■□□□ 1.16
CDK5RAP3-233ENST00000584186 ABCA9Q8IUA7 1624 aa22.29■■□□□ 1.16
CDK5RAP3-233ENST00000584186 KDM4FA0A1W2PPD8 638 aa22.29■■□□□ 1.16
CDK5RAP3-233ENST00000584186 FMN1Q68DA7 1419 aa22.27■■□□□ 1.16
CDK5RAP3-233ENST00000584186 CDK13Q14004 1512 aaKnown RBP22.24■■□□□ 1.15
CDK5RAP3-233ENST00000584186 ARAP3Q8WWN8 1544 aa22.2■■□□□ 1.14
CDK5RAP3-233ENST00000584186 HECW1Q76N89 1606 aa22.19■■□□□ 1.14
CDK5RAP3-233ENST00000584186 ADGRL1O94910 1474 aa22.18■■□□□ 1.14
CDK5RAP3-233ENST00000584186 PHLDB1Q86UU1 1377 aa22.18■■□□□ 1.14
CDK5RAP3-233ENST00000584186 NEO1Q92859 1461 aa22.16■■□□□ 1.14
CDK5RAP3-233ENST00000584186 RAPGEF3O95398 923 aa22.16■■□□□ 1.14
CDK5RAP3-233ENST00000584186 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDK5RAP3-233ENST00000584186 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.13
CDK5RAP3-233ENST00000584186 TTC37Q6PGP7 1564 aa22.12■■□□□ 1.13
CDK5RAP3-233ENST00000584186 FANCAO15360 1455 aa22.09■■□□□ 1.13
CDK5RAP3-233ENST00000584186 CLIP1P30622 1438 aa22.08■■□□□ 1.13
CDK5RAP3-233ENST00000584186 AKNAQ7Z591 1439 aa22.08■■□□□ 1.13
CDK5RAP3-233ENST00000584186 PCF11O94913 1555 aaKnown RBP22.05■■□□□ 1.12
CDK5RAP3-233ENST00000584186 CASKIN1Q8WXD9 1431 aa22.05■■□□□ 1.12
CDK5RAP3-233ENST00000584186 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
CDK5RAP3-233ENST00000584186 DENND4BO75064 1496 aaPredicted RBP22.04■■□□□ 1.12
CDK5RAP3-233ENST00000584186 LRRIQ1Q96JM4 1722 aa22.03■■□□□ 1.12
CDK5RAP3-233ENST00000584186 TROQ12816 1431 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP3-233ENST00000584186 FRMPD1Q5SYB0 1578 aa22.03■■□□□ 1.12
CDK5RAP3-233ENST00000584186 PLCH2O75038 1416 aa22.02■■□□□ 1.12
CDK5RAP3-233ENST00000584186 KIF14Q15058 1648 aa22.02■■□□□ 1.11
CDK5RAP3-233ENST00000584186 CCDC18Q5T9S5 1454 aa22■■□□□ 1.11
CDK5RAP3-233ENST00000584186 FYCO1Q9BQS8 1478 aa21.97■■□□□ 1.11
CDK5RAP3-233ENST00000584186 EFCAB2Q5VUJ9 269 aa21.97■■□□□ 1.11
CDK5RAP3-233ENST00000584186 ARID4BQ4LE39 1312 aaPredicted RBP21.97■■□□□ 1.11
CDK5RAP3-233ENST00000584186 MYO5CQ9NQX4 1742 aa21.97■■□□□ 1.11
CDK5RAP3-233ENST00000584186 RICTORQ6R327 1708 aa21.96■■□□□ 1.11
CDK5RAP3-233ENST00000584186 SCAPERQ9BY12 1400 aa21.96■■□□□ 1.11
CDK5RAP3-233ENST00000584186 ARHGAP5Q13017 1502 aa21.93■■□□□ 1.1
CDK5RAP3-233ENST00000584186 ARHGEF40Q8TER5 1519 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms