RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 KIF27Q86VH2 1401 aa26.55■■□□□ 1.84
SREBF1-222ENST00000583732 KIF13AQ9H1H9 1805 aa26.53■■□□□ 1.84
SREBF1-222ENST00000583732 IGF1RP08069 1367 aa26.5■■□□□ 1.83
SREBF1-222ENST00000583732 KIAA0586Q9BVV6 1533 aa26.45■■□□□ 1.83
SREBF1-222ENST00000583732 ADCY10Q96PN6 1610 aa26.43■■□□□ 1.82
SREBF1-222ENST00000583732 AEBP2Q6ZN18 517 aaPredicted RBP26.37■■□□□ 1.81
SREBF1-222ENST00000583732 CARMIL1Q5VZK9 1371 aa26.36■■□□□ 1.81
SREBF1-222ENST00000583732 NPM1P06748 294 aaKnown RBP eCLIP26.36■■□□□ 1.81
SREBF1-222ENST00000583732 MAPKBP1O60336 1514 aa26.34■■□□□ 1.81
SREBF1-222ENST00000583732 ABCC10Q5T3U5 1492 aa26.31■■□□□ 1.8
SREBF1-222ENST00000583732 DIP2BQ9P265 1576 aa26.31■■□□□ 1.8
SREBF1-222ENST00000583732 FAM69CQ0P6D2 419 aa26.3■■□□□ 1.8
SREBF1-222ENST00000583732 TTBK1Q5TCY1 1321 aaPredicted RBP26.3■■□□□ 1.8
SREBF1-222ENST00000583732 IQGAP2Q13576 1575 aa26.27■■□□□ 1.8
SREBF1-222ENST00000583732 PTPRGP23470 1445 aa26.22■■□□□ 1.79
SREBF1-222ENST00000583732 TSPOAP1O95153 1857 aa26.21■■□□□ 1.79
SREBF1-222ENST00000583732 CARMIL2Q6F5E8 1435 aa26.21■■□□□ 1.79
SREBF1-222ENST00000583732 TNIKQ9UKE5 1360 aa26.18■■□□□ 1.78
SREBF1-222ENST00000583732 RAPGEF2Q9Y4G8 1499 aa26.13■■□□□ 1.77
SREBF1-222ENST00000583732 KDM6BO15054 1643 aa26.11■■□□□ 1.77
SREBF1-222ENST00000583732 DISP1Q96F81 1524 aa26.11■■□□□ 1.77
SREBF1-222ENST00000583732 ABCC2Q92887 1545 aa26.1■■□□□ 1.77
SREBF1-222ENST00000583732 UGGT2Q9NYU1 1516 aa26.05■■□□□ 1.76
SREBF1-222ENST00000583732 KIAA0556O60303 1618 aa26.04■■□□□ 1.76
SREBF1-222ENST00000583732 ASXL2Q76L83 1435 aa26.04■■□□□ 1.76
SREBF1-222ENST00000583732 CTTNBP2Q8WZ74 1663 aa26.03■■□□□ 1.76
SREBF1-222ENST00000583732 UACAQ9BZF9 1416 aa26.03■■□□□ 1.76
SREBF1-222ENST00000583732 UHRF1BP1LA0JNW5 1464 aa26.03■■□□□ 1.76
SREBF1-222ENST00000583732 PLB1Q6P1J6 1458 aa25.99■■□□□ 1.75
SREBF1-222ENST00000583732 PPRC1Q5VV67 1664 aaKnown RBP25.97■■□□□ 1.75
SREBF1-222ENST00000583732 ZCCHC11Q5TAX3 1644 aaKnown RBP25.97■■□□□ 1.75
SREBF1-222ENST00000583732 GLI2P10070 1586 aa25.95■■□□□ 1.75
SREBF1-222ENST00000583732 KDM5BQ9UGL1 1544 aa25.92■■□□□ 1.74
SREBF1-222ENST00000583732 EPRSP07814 1512 aaKnown RBP25.88■■□□□ 1.73
SREBF1-222ENST00000583732 MAP3K4Q9Y6R4 1608 aa25.86■■□□□ 1.73
SREBF1-222ENST00000583732 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
SREBF1-222ENST00000583732 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
SREBF1-222ENST00000583732 KDM4FA0A1W2PPD8 638 aa25.79■■□□□ 1.72
SREBF1-222ENST00000583732 WDR7Q9Y4E6 1490 aa25.78■■□□□ 1.72
SREBF1-222ENST00000583732 ABCA8O94911 1581 aa25.78■■□□□ 1.72
SREBF1-222ENST00000583732 TEX14Q8IWB6 1497 aa25.74■■□□□ 1.71
SREBF1-222ENST00000583732 COL17A1Q9UMD9 1497 aaPredicted RBP25.72■■□□□ 1.71
SREBF1-222ENST00000583732 CFAP43Q8NDM7 1665 aa25.68■■□□□ 1.7
SREBF1-222ENST00000583732 P3H3Q8IVL6 736 aa25.66■■□□□ 1.7
SREBF1-222ENST00000583732 KCNH8Q96L42 1107 aa25.65■■□□□ 1.7
SREBF1-222ENST00000583732 ADGRL1O94910 1474 aa25.64■■□□□ 1.69
SREBF1-222ENST00000583732 ARID3CA6NKF2 412 aa25.63■■□□□ 1.69
SREBF1-222ENST00000583732 CD109Q6YHK3 1445 aa25.61■■□□□ 1.69
SREBF1-222ENST00000583732 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
SREBF1-222ENST00000583732 SAMD9Q5K651 1589 aa25.6■■□□□ 1.69
SREBF1-222ENST00000583732 MAGI3Q5TCQ9 1506 aa25.58■■□□□ 1.68
SREBF1-222ENST00000583732 FAM9AQ8IZU1 332 aaPredicted RBP25.54■■□□□ 1.68
SREBF1-222ENST00000583732 ATP10BO94823 1461 aa25.53■■□□□ 1.68
SREBF1-222ENST00000583732 RAPGEF6Q8TEU7 1601 aa25.52■■□□□ 1.68
SREBF1-222ENST00000583732 RANGAP1P46060 587 aaPredicted RBP25.52■■□□□ 1.68
SREBF1-222ENST00000583732 EEA1Q15075 1411 aa25.48■■□□□ 1.67
SREBF1-222ENST00000583732 ABCA9Q8IUA7 1624 aa25.45■■□□□ 1.66
SREBF1-222ENST00000583732 FHOD3Q2V2M9 1422 aa25.44■■□□□ 1.66
SREBF1-222ENST00000583732 KIF21BO75037 1637 aa25.43■■□□□ 1.66
SREBF1-222ENST00000583732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.42■■□□□ 1.66
SREBF1-222ENST00000583732 HNRNPUL2Q1KMD3 747 aaKnown RBP25.42■■□□□ 1.66
SREBF1-222ENST00000583732 NUP153P49790 1475 aaKnown RBP25.39■■□□□ 1.65
SREBF1-222ENST00000583732 ARAP3Q8WWN8 1544 aa25.37■■□□□ 1.65
SREBF1-222ENST00000583732 HECW2Q9P2P5 1572 aa25.31■■□□□ 1.64
SREBF1-222ENST00000583732 EFCAB5A4FU69 1503 aa25.31■■□□□ 1.64
SREBF1-222ENST00000583732 EHMT2Q96KQ7 1210 aa25.3■■□□□ 1.64
SREBF1-222ENST00000583732 NEO1Q92859 1461 aa25.28■■□□□ 1.64
SREBF1-222ENST00000583732 RAPGEF3O95398 923 aa25.25■■□□□ 1.63
SREBF1-222ENST00000583732 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
SREBF1-222ENST00000583732 FRMPD1Q5SYB0 1578 aa25.25■■□□□ 1.63
SREBF1-222ENST00000583732 PLEKHD1A6NEE1 506 aa25.2■■□□□ 1.62
SREBF1-222ENST00000583732 CDK13Q14004 1512 aaKnown RBP25.2■■□□□ 1.62
SREBF1-222ENST00000583732 TTC37Q6PGP7 1564 aa25.19■■□□□ 1.62
SREBF1-222ENST00000583732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.18■■□□□ 1.621e-6■■□□□ 11.6
SREBF1-222ENST00000583732 UBTFP17480 764 aaKnown RBP25.16■■□□□ 1.62
SREBF1-222ENST00000583732 CFAP74Q9C0B2 1584 aa25.16■■□□□ 1.62
SREBF1-222ENST00000583732 RICTORQ6R327 1708 aa25.15■■□□□ 1.62
SREBF1-222ENST00000583732 ADAMTSL3P82987 1691 aa25.15■■□□□ 1.62
SREBF1-222ENST00000583732 FANCAO15360 1455 aa25.13■■□□□ 1.61
SREBF1-222ENST00000583732 BCORL1Q5H9F3 1711 aa25.12■■□□□ 1.61
SREBF1-222ENST00000583732 ARHGEF40Q8TER5 1519 aa25.12■■□□□ 1.61
SREBF1-222ENST00000583732 AKNAQ7Z591 1439 aa25.12■■□□□ 1.61
SREBF1-222ENST00000583732 DENND4BO75064 1496 aaPredicted RBP25.11■■□□□ 1.61
SREBF1-222ENST00000583732 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
SREBF1-222ENST00000583732 HECW1Q76N89 1606 aa25.11■■□□□ 1.61
SREBF1-222ENST00000583732 ATP1B4Q9UN42 357 aaPredicted RBP25.1■■□□□ 1.61
SREBF1-222ENST00000583732 ARID4BQ4LE39 1312 aaPredicted RBP25.1■■□□□ 1.61
SREBF1-222ENST00000583732 MADDQ8WXG6 1647 aa25.09■■□□□ 1.61
SREBF1-222ENST00000583732 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
SREBF1-222ENST00000583732 PTPRMP28827 1452 aa25.08■■□□□ 1.6
SREBF1-222ENST00000583732 ILDR1Q86SU0 546 aaPredicted RBP25.07■■□□□ 1.6
SREBF1-222ENST00000583732 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
SREBF1-222ENST00000583732 RIMS1Q86UR5 1692 aaKnown RBP25.03■■□□□ 1.6
SREBF1-222ENST00000583732 MYO5CQ9NQX4 1742 aa25.01■■□□□ 1.59
SREBF1-222ENST00000583732 ZMYM4Q5VZL5 1548 aa25.01■■□□□ 1.59
SREBF1-222ENST00000583732 ZFYVE16Q7Z3T8 1539 aa25■■□□□ 1.59
SREBF1-222ENST00000583732 KIF14Q15058 1648 aa24.99■■□□□ 1.59
SREBF1-222ENST00000583732 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
SREBF1-222ENST00000583732 SIGLEC1Q9BZZ2 1709 aa24.98■■□□□ 1.59
SREBF1-222ENST00000583732 YEATS2Q9ULM3 1422 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms