RNA–Protein interactions for RNA: ENST00000583648.5

KPNB1-214, Transcript of karyopherin subunit beta 1, humanhuman

TSL 4

Gene KPNB1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-214ENST00000583648 CARMIL1Q5VZK9 1371 aa25.1■■□□□ 1.61
KPNB1-214ENST00000583648 KIAA0586Q9BVV6 1533 aa25.09■■□□□ 1.61
KPNB1-214ENST00000583648 CUL7Q14999 1698 aa25.07■■□□□ 1.6
KPNB1-214ENST00000583648 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
KPNB1-214ENST00000583648 NPM1P06748 294 aaKnown RBP eCLIP24.92■■□□□ 1.58
KPNB1-214ENST00000583648 CARMIL2Q6F5E8 1435 aa24.86■■□□□ 1.57
KPNB1-214ENST00000583648 RAPGEF2Q9Y4G8 1499 aa24.86■■□□□ 1.57
KPNB1-214ENST00000583648 PTPRGP23470 1445 aa24.84■■□□□ 1.57
KPNB1-214ENST00000583648 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
KPNB1-214ENST00000583648 IQGAP2Q13576 1575 aa24.77■■□□□ 1.56
KPNB1-214ENST00000583648 MAPKBP1O60336 1514 aa24.76■■□□□ 1.55
KPNB1-214ENST00000583648 ABCC10Q5T3U5 1492 aa24.74■■□□□ 1.55
KPNB1-214ENST00000583648 FAM69CQ0P6D2 419 aa24.73■■□□□ 1.55
KPNB1-214ENST00000583648 ADCY10Q96PN6 1610 aa24.72■■□□□ 1.55
KPNB1-214ENST00000583648 UGGT2Q9NYU1 1516 aa24.69■■□□□ 1.54
KPNB1-214ENST00000583648 DISP1Q96F81 1524 aa24.68■■□□□ 1.54
KPNB1-214ENST00000583648 PRXQ9BXM0 1461 aa24.67■■□□□ 1.54
KPNB1-214ENST00000583648 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
KPNB1-214ENST00000583648 UHRF1BP1LA0JNW5 1464 aa24.65■■□□□ 1.54
KPNB1-214ENST00000583648 UACAQ9BZF9 1416 aa24.64■■□□□ 1.54
KPNB1-214ENST00000583648 ABCC2Q92887 1545 aa24.63■■□□□ 1.53
KPNB1-214ENST00000583648 CSRNP3Q8WYN3 585 aa24.59■■□□□ 1.53
KPNB1-214ENST00000583648 KIF13AQ9H1H9 1805 aa24.57■■□□□ 1.52
KPNB1-214ENST00000583648 DIP2BQ9P265 1576 aa24.56■■□□□ 1.52
KPNB1-214ENST00000583648 GOLGA3Q08378 1498 aa24.56■■□□□ 1.52
KPNB1-214ENST00000583648 PLB1Q6P1J6 1458 aa24.56■■□□□ 1.52
KPNB1-214ENST00000583648 KIAA0556O60303 1618 aa24.53■■□□□ 1.52
KPNB1-214ENST00000583648 EEA1Q15075 1411 aa24.52■■□□□ 1.52
KPNB1-214ENST00000583648 ASXL2Q76L83 1435 aa24.52■■□□□ 1.52
KPNB1-214ENST00000583648 KDM5BQ9UGL1 1544 aa24.51■■□□□ 1.51
KPNB1-214ENST00000583648 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
KPNB1-214ENST00000583648 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
KPNB1-214ENST00000583648 GLI2P10070 1586 aa24.42■■□□□ 1.5
KPNB1-214ENST00000583648 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
KPNB1-214ENST00000583648 EPRSP07814 1512 aaKnown RBP24.37■■□□□ 1.49
KPNB1-214ENST00000583648 ABCA8O94911 1581 aa24.33■■□□□ 1.49
KPNB1-214ENST00000583648 ZCCHC11Q5TAX3 1644 aaKnown RBP24.31■■□□□ 1.48
KPNB1-214ENST00000583648 WDR7Q9Y4E6 1490 aa24.31■■□□□ 1.48
KPNB1-214ENST00000583648 KDM6BO15054 1643 aa24.29■■□□□ 1.48
KPNB1-214ENST00000583648 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
KPNB1-214ENST00000583648 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
KPNB1-214ENST00000583648 TEX14Q8IWB6 1497 aa24.26■■□□□ 1.47
KPNB1-214ENST00000583648 TSPOAP1O95153 1857 aa24.21■■□□□ 1.47
KPNB1-214ENST00000583648 SAMD9Q5K651 1589 aa24.21■■□□□ 1.47
KPNB1-214ENST00000583648 KCNH8Q96L42 1107 aa24.21■■□□□ 1.47
KPNB1-214ENST00000583648 MAP3K4Q9Y6R4 1608 aa24.2■■□□□ 1.46
KPNB1-214ENST00000583648 ATP10BO94823 1461 aa24.19■■□□□ 1.46
KPNB1-214ENST00000583648 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
KPNB1-214ENST00000583648 PPRC1Q5VV67 1664 aaKnown RBP24.18■■□□□ 1.46
KPNB1-214ENST00000583648 KIF21BO75037 1637 aa24.16■■□□□ 1.46
KPNB1-214ENST00000583648 MAGI3Q5TCQ9 1506 aa24.15■■□□□ 1.46
KPNB1-214ENST00000583648 COL17A1Q9UMD9 1497 aaPredicted RBP24.13■■□□□ 1.45
KPNB1-214ENST00000583648 RANGAP1P46060 587 aaPredicted RBP24.11■■□□□ 1.45
KPNB1-214ENST00000583648 ARID3CA6NKF2 412 aa24.1■■□□□ 1.45
KPNB1-214ENST00000583648 FHOD3Q2V2M9 1422 aa24.09■■□□□ 1.45
KPNB1-214ENST00000583648 KDM4FA0A1W2PPD8 638 aa24.08■■□□□ 1.45
KPNB1-214ENST00000583648 UBTFP17480 764 aaKnown RBP24.08■■□□□ 1.45
KPNB1-214ENST00000583648 EFCAB5A4FU69 1503 aa24.08■■□□□ 1.45
KPNB1-214ENST00000583648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.07■■□□□ 1.44
KPNB1-214ENST00000583648 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
KPNB1-214ENST00000583648 RAPGEF6Q8TEU7 1601 aa24.06■■□□□ 1.44
KPNB1-214ENST00000583648 CFAP43Q8NDM7 1665 aa24.05■■□□□ 1.44
KPNB1-214ENST00000583648 PHLDB1Q86UU1 1377 aa24.04■■□□□ 1.44
KPNB1-214ENST00000583648 NUP153P49790 1475 aaKnown RBP24.04■■□□□ 1.44
KPNB1-214ENST00000583648 PLEKHD1A6NEE1 506 aa24.02■■□□□ 1.44
KPNB1-214ENST00000583648 ARAP3Q8WWN8 1544 aa23.95■■□□□ 1.43
KPNB1-214ENST00000583648 ABCA9Q8IUA7 1624 aa23.94■■□□□ 1.42
KPNB1-214ENST00000583648 FMN1Q68DA7 1419 aa23.93■■□□□ 1.42
KPNB1-214ENST00000583648 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
KPNB1-214ENST00000583648 NEO1Q92859 1461 aa23.91■■□□□ 1.42
KPNB1-214ENST00000583648 ARHGAP35Q9NRY4 1499 aa23.87■■□□□ 1.41
KPNB1-214ENST00000583648 ADGRL1O94910 1474 aa23.87■■□□□ 1.41
KPNB1-214ENST00000583648 CDK11AQ9UQ88 783 aaPredicted RBP23.85■■□□□ 1.41
KPNB1-214ENST00000583648 RAPGEF3O95398 923 aa23.8■■□□□ 1.4
KPNB1-214ENST00000583648 ATP1B4Q9UN42 357 aaPredicted RBP23.8■■□□□ 1.4
KPNB1-214ENST00000583648 AKNAQ7Z591 1439 aa23.76■■□□□ 1.39
KPNB1-214ENST00000583648 CDK13Q14004 1512 aaKnown RBP23.75■■□□□ 1.39
KPNB1-214ENST00000583648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.75■■□□□ 1.395e-25■□□□□ 10.7
KPNB1-214ENST00000583648 HECW1Q76N89 1606 aa23.74■■□□□ 1.39
KPNB1-214ENST00000583648 FANCAO15360 1455 aa23.73■■□□□ 1.39
KPNB1-214ENST00000583648 DENND4BO75064 1496 aaPredicted RBP23.73■■□□□ 1.39
KPNB1-214ENST00000583648 PLCH2O75038 1416 aa23.72■■□□□ 1.39
KPNB1-214ENST00000583648 TROQ12816 1431 aaPredicted RBP23.67■■□□□ 1.38
KPNB1-214ENST00000583648 EFCAB2Q5VUJ9 269 aa23.67■■□□□ 1.38
KPNB1-214ENST00000583648 CASKIN1Q8WXD9 1431 aa23.67■■□□□ 1.38
KPNB1-214ENST00000583648 CFAP74Q9C0B2 1584 aa23.66■■□□□ 1.38
KPNB1-214ENST00000583648 CLIP1P30622 1438 aa23.65■■□□□ 1.38
KPNB1-214ENST00000583648 TTC37Q6PGP7 1564 aa23.65■■□□□ 1.38
KPNB1-214ENST00000583648 FRMPD1Q5SYB0 1578 aa23.62■■□□□ 1.37
KPNB1-214ENST00000583648 CCDC18Q5T9S5 1454 aa23.61■■□□□ 1.37
KPNB1-214ENST00000583648 MAGI2Q86UL8 1455 aa23.61■■□□□ 1.37
KPNB1-214ENST00000583648 SCAPERQ9BY12 1400 aa23.6■■□□□ 1.37
KPNB1-214ENST00000583648 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
KPNB1-214ENST00000583648 ZMYM4Q5VZL5 1548 aa23.55■■□□□ 1.36
KPNB1-214ENST00000583648 POGZQ7Z3K3 1410 aa23.55■■□□□ 1.36
KPNB1-214ENST00000583648 FYCO1Q9BQS8 1478 aa23.55■■□□□ 1.36
KPNB1-214ENST00000583648 KIF14Q15058 1648 aa23.55■■□□□ 1.36
KPNB1-214ENST00000583648 ARHGEF40Q8TER5 1519 aa23.53■■□□□ 1.36
KPNB1-214ENST00000583648 RICTORQ6R327 1708 aa23.53■■□□□ 1.36
KPNB1-214ENST00000583648 PCF11O94913 1555 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms