RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
CDK5RAP3-228ENST00000583363 FHAD1B1AJZ9 1412 aa26.73■■□□□ 1.87
CDK5RAP3-228ENST00000583363 CUL7Q14999 1698 aa26.71■■□□□ 1.87
CDK5RAP3-228ENST00000583363 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
CDK5RAP3-228ENST00000583363 LOC105371045A0A1W2PR82 267 aa26.7■■□□□ 1.86
CDK5RAP3-228ENST00000583363 NUP160Q12769 1436 aa26.69■■□□□ 1.86
CDK5RAP3-228ENST00000583363 RAPGEF2Q9Y4G8 1499 aa26.68■■□□□ 1.86
CDK5RAP3-228ENST00000583363 KIF21BO75037 1637 aa26.66■■□□□ 1.86
CDK5RAP3-228ENST00000583363 EHMT2Q96KQ7 1210 aa26.65■■□□□ 1.86
CDK5RAP3-228ENST00000583363 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
CDK5RAP3-228ENST00000583363 GOLGA3Q08378 1498 aa26.6■■□□□ 1.85
CDK5RAP3-228ENST00000583363 UBTFP17480 764 aaKnown RBP26.57■■□□□ 1.84
CDK5RAP3-228ENST00000583363 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
CDK5RAP3-228ENST00000583363 TNIKQ9UKE5 1360 aa26.46■■□□□ 1.83
CDK5RAP3-228ENST00000583363 PRG4Q92954 1404 aaPredicted RBP26.44■■□□□ 1.82
CDK5RAP3-228ENST00000583363 KIF13AQ9H1H9 1805 aa26.4■■□□□ 1.82
CDK5RAP3-228ENST00000583363 JPH4Q96JJ6 628 aa26.4■■□□□ 1.82
CDK5RAP3-228ENST00000583363 KIAA0586Q9BVV6 1533 aa26.34■■□□□ 1.81
CDK5RAP3-228ENST00000583363 CTTNBP2Q8WZ74 1663 aa26.28■■□□□ 1.8
CDK5RAP3-228ENST00000583363 RANGAP1P46060 587 aaPredicted RBP26.25■■□□□ 1.79
CDK5RAP3-228ENST00000583363 IQGAP2Q13576 1575 aa26.23■■□□□ 1.79
CDK5RAP3-228ENST00000583363 ABCC10Q5T3U5 1492 aa26.2■■□□□ 1.78
CDK5RAP3-228ENST00000583363 ADCY10Q96PN6 1610 aa26.2■■□□□ 1.78
CDK5RAP3-228ENST00000583363 CEP162Q5TB80 1403 aa26.2■■□□□ 1.78
CDK5RAP3-228ENST00000583363 MAPKBP1O60336 1514 aa26.19■■□□□ 1.78
CDK5RAP3-228ENST00000583363 FAM69CQ0P6D2 419 aa26.18■■□□□ 1.78
CDK5RAP3-228ENST00000583363 CLIP1P30622 1438 aa26.16■■□□□ 1.78
CDK5RAP3-228ENST00000583363 NPM1P06748 294 aaKnown RBP eCLIP26.16■■□□□ 1.78
CDK5RAP3-228ENST00000583363 UGGT2Q9NYU1 1516 aa26.15■■□□□ 1.78
CDK5RAP3-228ENST00000583363 DIP2BQ9P265 1576 aa26.15■■□□□ 1.78
CDK5RAP3-228ENST00000583363 ARHGAP35Q9NRY4 1499 aa26.1■■□□□ 1.77
CDK5RAP3-228ENST00000583363 P3H3Q8IVL6 736 aa26.09■■□□□ 1.77
CDK5RAP3-228ENST00000583363 EFCAB5A4FU69 1503 aa26.05■■□□□ 1.76
CDK5RAP3-228ENST00000583363 DISP1Q96F81 1524 aa26.05■■□□□ 1.76
CDK5RAP3-228ENST00000583363 SAMD9Q5K651 1589 aa26.03■■□□□ 1.76
CDK5RAP3-228ENST00000583363 CARMIL2Q6F5E8 1435 aa26.03■■□□□ 1.76
CDK5RAP3-228ENST00000583363 TSPOAP1O95153 1857 aa26■■□□□ 1.75
CDK5RAP3-228ENST00000583363 KDM6BO15054 1643 aa25.98■■□□□ 1.75
CDK5RAP3-228ENST00000583363 PTPRGP23470 1445 aa25.97■■□□□ 1.75
CDK5RAP3-228ENST00000583363 FHOD3Q2V2M9 1422 aa25.97■■□□□ 1.75
CDK5RAP3-228ENST00000583363 KIAA0556O60303 1618 aa25.97■■□□□ 1.75
CDK5RAP3-228ENST00000583363 TTBK1Q5TCY1 1321 aaPredicted RBP25.93■■□□□ 1.74
CDK5RAP3-228ENST00000583363 ABCC2Q92887 1545 aa25.88■■□□□ 1.73
CDK5RAP3-228ENST00000583363 KDM4FA0A1W2PPD8 638 aa25.85■■□□□ 1.73
CDK5RAP3-228ENST00000583363 FMN1Q68DA7 1419 aa25.85■■□□□ 1.73
CDK5RAP3-228ENST00000583363 VPS8Q8N3P4 1428 aa25.84■■□□□ 1.73
CDK5RAP3-228ENST00000583363 ASXL2Q76L83 1435 aa25.83■■□□□ 1.73
CDK5RAP3-228ENST00000583363 UHRF1BP1LA0JNW5 1464 aa25.81■■□□□ 1.72
CDK5RAP3-228ENST00000583363 PPRC1Q5VV67 1664 aaKnown RBP25.8■■□□□ 1.72
CDK5RAP3-228ENST00000583363 PLB1Q6P1J6 1458 aa25.79■■□□□ 1.72
CDK5RAP3-228ENST00000583363 GLI2P10070 1586 aa25.79■■□□□ 1.72
CDK5RAP3-228ENST00000583363 UACAQ9BZF9 1416 aa25.78■■□□□ 1.72
CDK5RAP3-228ENST00000583363 CASKIN1Q8WXD9 1431 aa25.74■■□□□ 1.71
CDK5RAP3-228ENST00000583363 ATP1B4Q9UN42 357 aaPredicted RBP25.71■■□□□ 1.71
CDK5RAP3-228ENST00000583363 KDM5BQ9UGL1 1544 aa25.71■■□□□ 1.71
CDK5RAP3-228ENST00000583363 ABCA8O94911 1581 aa25.68■■□□□ 1.7
CDK5RAP3-228ENST00000583363 EPRSP07814 1512 aaKnown RBP25.68■■□□□ 1.7
CDK5RAP3-228ENST00000583363 ZCCHC11Q5TAX3 1644 aaKnown RBP25.67■■□□□ 1.7
CDK5RAP3-228ENST00000583363 MAP3K4Q9Y6R4 1608 aa25.66■■□□□ 1.7
CDK5RAP3-228ENST00000583363 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
CDK5RAP3-228ENST00000583363 PCF11O94913 1555 aaKnown RBP25.65■■□□□ 1.7
CDK5RAP3-228ENST00000583363 RAPGEF6Q8TEU7 1601 aa25.65■■□□□ 1.7
CDK5RAP3-228ENST00000583363 COL17A1Q9UMD9 1497 aaPredicted RBP25.65■■□□□ 1.7
CDK5RAP3-228ENST00000583363 APLP2Q06481 763 aa25.61■■□□□ 1.69
CDK5RAP3-228ENST00000583363 NUP153P49790 1475 aaKnown RBP25.6■■□□□ 1.69
CDK5RAP3-228ENST00000583363 HECW1Q76N89 1606 aa25.58■■□□□ 1.69
CDK5RAP3-228ENST00000583363 ADGRL1O94910 1474 aa25.58■■□□□ 1.69
CDK5RAP3-228ENST00000583363 ARID3CA6NKF2 412 aa25.57■■□□□ 1.68
CDK5RAP3-228ENST00000583363 TEX14Q8IWB6 1497 aa25.55■■□□□ 1.68
CDK5RAP3-228ENST00000583363 ATP10BO94823 1461 aa25.53■■□□□ 1.68
CDK5RAP3-228ENST00000583363 MAP3K1Q13233 1512 aa25.53■■□□□ 1.68
CDK5RAP3-228ENST00000583363 WDR7Q9Y4E6 1490 aa25.53■■□□□ 1.68
CDK5RAP3-228ENST00000583363 CCDC18Q5T9S5 1454 aa25.52■■□□□ 1.68
CDK5RAP3-228ENST00000583363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
CDK5RAP3-228ENST00000583363 HNRNPUL2Q1KMD3 747 aaKnown RBP25.51■■□□□ 1.67
CDK5RAP3-228ENST00000583363 LRRIQ1Q96JM4 1722 aa25.5■■□□□ 1.67
CDK5RAP3-228ENST00000583363 KANK4Q5T7N3 995 aaPredicted RBP25.48■■□□□ 1.67
CDK5RAP3-228ENST00000583363 CDK13Q14004 1512 aaKnown RBP25.47■■□□□ 1.67
CDK5RAP3-228ENST00000583363 CDK11AQ9UQ88 783 aaPredicted RBP25.46■■□□□ 1.67
CDK5RAP3-228ENST00000583363 TIAM1Q13009 1591 aa25.46■■□□□ 1.67
CDK5RAP3-228ENST00000583363 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
CDK5RAP3-228ENST00000583363 PLEKHD1A6NEE1 506 aa25.43■■□□□ 1.66
CDK5RAP3-228ENST00000583363 CFAP43Q8NDM7 1665 aa25.41■■□□□ 1.66
CDK5RAP3-228ENST00000583363 MAGI3Q5TCQ9 1506 aa25.4■■□□□ 1.66
CDK5RAP3-228ENST00000583363 LRRC9Q6ZRR7 1453 aa25.4■■□□□ 1.66
CDK5RAP3-228ENST00000583363 CD109Q6YHK3 1445 aa25.39■■□□□ 1.66
CDK5RAP3-228ENST00000583363 KCNH8Q96L42 1107 aa25.38■■□□□ 1.65
CDK5RAP3-228ENST00000583363 MTUS2Q5JR59 1369 aa25.37■■□□□ 1.65
CDK5RAP3-228ENST00000583363 TROQ12816 1431 aaPredicted RBP25.32■■□□□ 1.64
CDK5RAP3-228ENST00000583363 ILDR1Q86SU0 546 aaPredicted RBP25.32■■□□□ 1.64
CDK5RAP3-228ENST00000583363 HECW2Q9P2P5 1572 aa25.31■■□□□ 1.64
CDK5RAP3-228ENST00000583363 EHBP1L1Q8N3D4 1523 aa25.28■■□□□ 1.64
CDK5RAP3-228ENST00000583363 ARAP3Q8WWN8 1544 aa25.21■■□□□ 1.63
CDK5RAP3-228ENST00000583363 NCOA2Q15596 1464 aa25.19■■□□□ 1.62
CDK5RAP3-228ENST00000583363 ABCA9Q8IUA7 1624 aa25.18■■□□□ 1.62
CDK5RAP3-228ENST00000583363 SUPT6HQ7KZ85 1726 aaKnown RBP25.17■■□□□ 1.62
CDK5RAP3-228ENST00000583363 KIF14Q15058 1648 aa25.15■■□□□ 1.62
CDK5RAP3-228ENST00000583363 PHLDB1Q86UU1 1377 aa25.14■■□□□ 1.61
CDK5RAP3-228ENST00000583363 CCNB3Q8WWL7 1395 aa25.1■■□□□ 1.61
CDK5RAP3-228ENST00000583363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms