RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 KIAA0586Q9BVV6 1533 aa22.22■■□□□ 1.15
ITGB4-209ENST00000583327 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
ITGB4-209ENST00000583327 OSCARQ8IYS5 282 aa22.19■■□□□ 1.14
ITGB4-209ENST00000583327 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
ITGB4-209ENST00000583327 CTTNBP2Q8WZ74 1663 aa22.14■■□□□ 1.14
ITGB4-209ENST00000583327 IQGAP2Q13576 1575 aa22.11■■□□□ 1.13
ITGB4-209ENST00000583327 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
ITGB4-209ENST00000583327 UGGT2Q9NYU1 1516 aa22.07■■□□□ 1.12
ITGB4-209ENST00000583327 SHROOM2Q13796 1616 aa22.05■■□□□ 1.12
ITGB4-209ENST00000583327 CEP162Q5TB80 1403 aa22.01■■□□□ 1.11
ITGB4-209ENST00000583327 DISP1Q96F81 1524 aa21.98■■□□□ 1.11
ITGB4-209ENST00000583327 SAMD9Q5K651 1589 aa21.97■■□□□ 1.11
ITGB4-209ENST00000583327 CLIP1P30622 1438 aa21.97■■□□□ 1.11
ITGB4-209ENST00000583327 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
ITGB4-209ENST00000583327 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
ITGB4-209ENST00000583327 PRG4Q92954 1404 aaPredicted RBP21.95■■□□□ 1.1
ITGB4-209ENST00000583327 CARMIL2Q6F5E8 1435 aa21.91■■□□□ 1.1
ITGB4-209ENST00000583327 RANGAP1P46060 587 aaPredicted RBP21.91■■□□□ 1.1
ITGB4-209ENST00000583327 KIAA0556O60303 1618 aa21.9■■□□□ 1.1
ITGB4-209ENST00000583327 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
ITGB4-209ENST00000583327 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
ITGB4-209ENST00000583327 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
ITGB4-209ENST00000583327 FHOD3Q2V2M9 1422 aa21.83■■□□□ 1.09
ITGB4-209ENST00000583327 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
ITGB4-209ENST00000583327 PTPRGP23470 1445 aa21.77■■□□□ 1.08
ITGB4-209ENST00000583327 FMN1Q68DA7 1419 aa21.75■■□□□ 1.07
ITGB4-209ENST00000583327 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
ITGB4-209ENST00000583327 DNAJC5Q9H3Z4 198 aa21.72■■□□□ 1.07
ITGB4-209ENST00000583327 RIMBP3CA6NJZ7 1639 aa21.71■■□□□ 1.07
ITGB4-209ENST00000583327 RIMBP3BA6NNM3 1639 aa21.71■■□□□ 1.07
ITGB4-209ENST00000583327 RIMBP3Q9UFD9 1639 aa21.71■■□□□ 1.07
ITGB4-209ENST00000583327 ABCA8O94911 1581 aa21.67■■□□□ 1.06
ITGB4-209ENST00000583327 CASKIN1Q8WXD9 1431 aa21.67■■□□□ 1.06
ITGB4-209ENST00000583327 PLB1Q6P1J6 1458 aa21.65■■□□□ 1.06
ITGB4-209ENST00000583327 UACAQ9BZF9 1416 aa21.64■■□□□ 1.06
ITGB4-209ENST00000583327 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.05
ITGB4-209ENST00000583327 TTBK1Q5TCY1 1321 aaPredicted RBP21.61■■□□□ 1.05
ITGB4-209ENST00000583327 FYCO1Q9BQS8 1478 aa21.61■■□□□ 1.05
ITGB4-209ENST00000583327 RAPGEF6Q8TEU7 1601 aa21.61■■□□□ 1.05
ITGB4-209ENST00000583327 PCF11O94913 1555 aaKnown RBP21.59■■□□□ 1.05
ITGB4-209ENST00000583327 NUP153P49790 1475 aaKnown RBP21.58■■□□□ 1.05
ITGB4-209ENST00000583327 ABCC2Q92887 1545 aa21.58■■□□□ 1.04
ITGB4-209ENST00000583327 CYB5RLQ6IPT4 315 aa21.56■■□□□ 1.04
ITGB4-209ENST00000583327 HECW1Q76N89 1606 aa21.53■■□□□ 1.04
ITGB4-209ENST00000583327 ADCY10Q96PN6 1610 aa21.53■■□□□ 1.04
ITGB4-209ENST00000583327 MAP3K1Q13233 1512 aa21.53■■□□□ 1.04
ITGB4-209ENST00000583327 ATP10BO94823 1461 aa21.52■■□□□ 1.04
ITGB4-209ENST00000583327 EPRSP07814 1512 aaKnown RBP21.52■■□□□ 1.04
ITGB4-209ENST00000583327 KDM5BQ9UGL1 1544 aa21.52■■□□□ 1.04
ITGB4-209ENST00000583327 LRRIQ1Q96JM4 1722 aa21.49■■□□□ 1.03
ITGB4-209ENST00000583327 CCDC18Q5T9S5 1454 aa21.48■■□□□ 1.03
ITGB4-209ENST00000583327 ATP1B4Q9UN42 357 aaPredicted RBP21.48■■□□□ 1.03
ITGB4-209ENST00000583327 CDK13Q14004 1512 aaKnown RBP21.44■■□□□ 1.02
ITGB4-209ENST00000583327 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
ITGB4-209ENST00000583327 CFAP43Q8NDM7 1665 aa21.4■■□□□ 1.02
ITGB4-209ENST00000583327 ZCCHC11Q5TAX3 1644 aaKnown RBP21.4■■□□□ 1.02
ITGB4-209ENST00000583327 ARID3CA6NKF2 412 aa21.39■■□□□ 1.01
ITGB4-209ENST00000583327 APLP2Q06481 763 aa21.39■■□□□ 1.01
ITGB4-209ENST00000583327 KANK4Q5T7N3 995 aaPredicted RBP21.39■■□□□ 1.01
ITGB4-209ENST00000583327 NPM1P06748 294 aaKnown RBP eCLIP21.37■■□□□ 1.01
ITGB4-209ENST00000583327 CDK11AQ9UQ88 783 aaPredicted RBP21.37■■□□□ 1.01
ITGB4-209ENST00000583327 MAGI3Q5TCQ9 1506 aa21.37■■□□□ 1.01
ITGB4-209ENST00000583327 LRRC9Q6ZRR7 1453 aa21.37■■□□□ 1.01
ITGB4-209ENST00000583327 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
ITGB4-209ENST00000583327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.33■■□□□ 1.01
ITGB4-209ENST00000583327 HNRNPUL2Q1KMD3 747 aaKnown RBP21.33■■□□□ 1.01
ITGB4-209ENST00000583327 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
ITGB4-209ENST00000583327 MAPKBP1O60336 1514 aa21.31■■□□□ 1
ITGB4-209ENST00000583327 ASXL2Q76L83 1435 aa21.29■■□□□ 1
ITGB4-209ENST00000583327 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
ITGB4-209ENST00000583327 EHBP1L1Q8N3D4 1523 aa21.28■■□□□ 1
ITGB4-209ENST00000583327 WDR7Q9Y4E6 1490 aa21.27■■□□□ 1
ITGB4-209ENST00000583327 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
ITGB4-209ENST00000583327 ABCC10Q5T3U5 1492 aa21.2■□□□□ 0.98
ITGB4-209ENST00000583327 NCOA2Q15596 1464 aa21.19■□□□□ 0.98
ITGB4-209ENST00000583327 KCNH8Q96L42 1107 aa21.18■□□□□ 0.98
ITGB4-209ENST00000583327 KIF14Q15058 1648 aa21.18■□□□□ 0.98
ITGB4-209ENST00000583327 SUPT6HQ7KZ85 1726 aaKnown RBP21.17■□□□□ 0.98
ITGB4-209ENST00000583327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.16■□□□□ 0.98
ITGB4-209ENST00000583327 GLI2P10070 1586 aa21.14■□□□□ 0.97
ITGB4-209ENST00000583327 PHLDB1Q86UU1 1377 aa21.13■□□□□ 0.97
ITGB4-209ENST00000583327 ABCA9Q8IUA7 1624 aa21.12■□□□□ 0.97
ITGB4-209ENST00000583327 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
ITGB4-209ENST00000583327 DIP2BQ9P265 1576 aa21.1■□□□□ 0.97
ITGB4-209ENST00000583327 PLCH2O75038 1416 aa21.08■□□□□ 0.97
ITGB4-209ENST00000583327 TTC37Q6PGP7 1564 aa21.08■□□□□ 0.97
ITGB4-209ENST00000583327 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.96
ITGB4-209ENST00000583327 MYOM3Q5VTT5 1437 aa21.07■□□□□ 0.96
ITGB4-209ENST00000583327 MIA2Q96PC5 1412 aa21.05■□□□□ 0.96
ITGB4-209ENST00000583327 ARAP3Q8WWN8 1544 aa21.05■□□□□ 0.96
ITGB4-209ENST00000583327 FAM69CQ0P6D2 419 aa21.05■□□□□ 0.96
ITGB4-209ENST00000583327 CD109Q6YHK3 1445 aa21.04■□□□□ 0.96
ITGB4-209ENST00000583327 CDC42BPAQ5VT25 1732 aa21.03■□□□□ 0.96
ITGB4-209ENST00000583327 MAP3K4Q9Y6R4 1608 aa21.03■□□□□ 0.96
ITGB4-209ENST00000583327 RRBP1Q9P2E9 1410 aaKnown RBP21.03■□□□□ 0.96
ITGB4-209ENST00000583327 FGD6Q6ZV73 1430 aa21.02■□□□□ 0.96
ITGB4-209ENST00000583327 KIF13AQ9H1H9 1805 aa21.01■□□□□ 0.95
ITGB4-209ENST00000583327 CDC42BPBQ9Y5S2 1711 aa21■□□□□ 0.95
ITGB4-209ENST00000583327 PREX2Q70Z35 1606 aa21■□□□□ 0.95
ITGB4-209ENST00000583327 CFDP1Q9UEE9 299 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms