RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 PRG4Q92954 1404 aaPredicted RBP30.47■■■□□ 2.47
ERBB2-211ENST00000582648 KIAA0586Q9BVV6 1533 aa30.47■■■□□ 2.47
ERBB2-211ENST00000582648 RAPGEF2Q9Y4G8 1499 aa30.44■■■□□ 2.46
ERBB2-211ENST00000582648 JPH4Q96JJ6 628 aa30.44■■■□□ 2.46
ERBB2-211ENST00000582648 IQGAP2Q13576 1575 aa30.36■■■□□ 2.45
ERBB2-211ENST00000582648 PRXQ9BXM0 1461 aa30.28■■■□□ 2.44
ERBB2-211ENST00000582648 CTTNBP2Q8WZ74 1663 aa30.27■■■□□ 2.44
ERBB2-211ENST00000582648 CHIC1Q5VXU3 224 aa30.27■■■□□ 2.44
ERBB2-211ENST00000582648 EEA1Q15075 1411 aa30.21■■■□□ 2.43
ERBB2-211ENST00000582648 FAM9AQ8IZU1 332 aaPredicted RBP30.19■■■□□ 2.42
ERBB2-211ENST00000582648 CSRNP3Q8WYN3 585 aa30.19■■■□□ 2.42
ERBB2-211ENST00000582648 CARMIL2Q6F5E8 1435 aa30.15■■■□□ 2.42
ERBB2-211ENST00000582648 TRHP20396 242 aaPredicted RBP30.14■■■□□ 2.42
ERBB2-211ENST00000582648 UGGT2Q9NYU1 1516 aa30.13■■■□□ 2.41
ERBB2-211ENST00000582648 TTBK1Q5TCY1 1321 aaPredicted RBP30.13■■■□□ 2.41
ERBB2-211ENST00000582648 DISP1Q96F81 1524 aa30.12■■■□□ 2.41
ERBB2-211ENST00000582648 KIAA0556O60303 1618 aa30.08■■■□□ 2.41
ERBB2-211ENST00000582648 ADCY10Q96PN6 1610 aa30.08■■■□□ 2.41
ERBB2-211ENST00000582648 TNIKQ9UKE5 1360 aa30.06■■■□□ 2.4
ERBB2-211ENST00000582648 PTPRGP23470 1445 aa30.05■■■□□ 2.4
ERBB2-211ENST00000582648 KIF21BO75037 1637 aa29.99■■■□□ 2.39
ERBB2-211ENST00000582648 GOLGA3Q08378 1498 aa29.93■■■□□ 2.38
ERBB2-211ENST00000582648 NPM1P06748 294 aaKnown RBP eCLIP29.89■■■□□ 2.38
ERBB2-211ENST00000582648 EHMT2Q96KQ7 1210 aa29.89■■■□□ 2.38
ERBB2-211ENST00000582648 UACAQ9BZF9 1416 aa29.86■■■□□ 2.37
ERBB2-211ENST00000582648 MAPKBP1O60336 1514 aa29.86■■■□□ 2.37
ERBB2-211ENST00000582648 ABCC2Q92887 1545 aa29.85■■■□□ 2.37
ERBB2-211ENST00000582648 KIF13AQ9H1H9 1805 aa29.84■■■□□ 2.37
ERBB2-211ENST00000582648 UHRF1BP1LA0JNW5 1464 aa29.82■■■□□ 2.36
ERBB2-211ENST00000582648 SAMD9Q5K651 1589 aa29.81■■■□□ 2.36
ERBB2-211ENST00000582648 RANGAP1P46060 587 aaPredicted RBP29.81■■■□□ 2.36
ERBB2-211ENST00000582648 P3H3Q8IVL6 736 aa29.79■■■□□ 2.36
ERBB2-211ENST00000582648 PLB1Q6P1J6 1458 aa29.78■■■□□ 2.36
ERBB2-211ENST00000582648 DIP2BQ9P265 1576 aa29.75■■■□□ 2.35
ERBB2-211ENST00000582648 ZCCHC11Q5TAX3 1644 aaKnown RBP29.74■■■□□ 2.35
ERBB2-211ENST00000582648 ABCC10Q5T3U5 1492 aa29.73■■■□□ 2.35
ERBB2-211ENST00000582648 ABCA8O94911 1581 aa29.73■■■□□ 2.35
ERBB2-211ENST00000582648 UBTFP17480 764 aaKnown RBP29.71■■■□□ 2.35
ERBB2-211ENST00000582648 KDM5BQ9UGL1 1544 aa29.7■■■□□ 2.34
ERBB2-211ENST00000582648 FAM69CQ0P6D2 419 aa29.67■■■□□ 2.34
ERBB2-211ENST00000582648 ASXL2Q76L83 1435 aa29.67■■■□□ 2.34
ERBB2-211ENST00000582648 FHOD3Q2V2M9 1422 aa29.66■■■□□ 2.34
ERBB2-211ENST00000582648 EFCAB5A4FU69 1503 aa29.63■■■□□ 2.33
ERBB2-211ENST00000582648 TSPOAP1O95153 1857 aa29.58■■■□□ 2.33
ERBB2-211ENST00000582648 RAPGEF6Q8TEU7 1601 aa29.58■■■□□ 2.33
ERBB2-211ENST00000582648 ARID3CA6NKF2 412 aa29.56■■■□□ 2.32
ERBB2-211ENST00000582648 WDR7Q9Y4E6 1490 aa29.51■■■□□ 2.31
ERBB2-211ENST00000582648 EPRSP07814 1512 aaKnown RBP29.5■■■□□ 2.31
ERBB2-211ENST00000582648 GLI2P10070 1586 aa29.48■■■□□ 2.31
ERBB2-211ENST00000582648 ARHGAP35Q9NRY4 1499 aa29.48■■■□□ 2.31
ERBB2-211ENST00000582648 ATP10BO94823 1461 aa29.44■■■□□ 2.3
ERBB2-211ENST00000582648 NUP153P49790 1475 aaKnown RBP29.43■■■□□ 2.3
ERBB2-211ENST00000582648 PPRC1Q5VV67 1664 aaKnown RBP29.4■■■□□ 2.3
ERBB2-211ENST00000582648 MAP3K4Q9Y6R4 1608 aa29.4■■■□□ 2.3
ERBB2-211ENST00000582648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.35■■■□□ 2.29
ERBB2-211ENST00000582648 HNRNPUL2Q1KMD3 747 aaKnown RBP29.35■■■□□ 2.29
ERBB2-211ENST00000582648 KCNH8Q96L42 1107 aa29.35■■■□□ 2.29
ERBB2-211ENST00000582648 KDM6BO15054 1643 aa29.32■■■□□ 2.28
ERBB2-211ENST00000582648 FMN1Q68DA7 1419 aa29.32■■■□□ 2.28
ERBB2-211ENST00000582648 CFAP43Q8NDM7 1665 aa29.3■■■□□ 2.28
ERBB2-211ENST00000582648 HECW1Q76N89 1606 aa29.29■■■□□ 2.28
ERBB2-211ENST00000582648 CDK13Q14004 1512 aaKnown RBP29.28■■■□□ 2.28
ERBB2-211ENST00000582648 ATP1B4Q9UN42 357 aaPredicted RBP29.25■■■□□ 2.27
ERBB2-211ENST00000582648 CLIP1P30622 1438 aa29.25■■■□□ 2.27
ERBB2-211ENST00000582648 TEX14Q8IWB6 1497 aa29.23■■■□□ 2.27
ERBB2-211ENST00000582648 CD109Q6YHK3 1445 aa29.21■■■□□ 2.27
ERBB2-211ENST00000582648 PCF11O94913 1555 aaKnown RBP29.21■■■□□ 2.27
ERBB2-211ENST00000582648 ABCA9Q8IUA7 1624 aa29.19■■■□□ 2.26
ERBB2-211ENST00000582648 LRRIQ1Q96JM4 1722 aa29.18■■■□□ 2.26
ERBB2-211ENST00000582648 MAGI3Q5TCQ9 1506 aa29.15■■■□□ 2.26
ERBB2-211ENST00000582648 PLEKHD1A6NEE1 506 aa29.13■■■□□ 2.25
ERBB2-211ENST00000582648 CEP162Q5TB80 1403 aa29.1■■■□□ 2.25
ERBB2-211ENST00000582648 CASKIN1Q8WXD9 1431 aa29.09■■■□□ 2.25
ERBB2-211ENST00000582648 COL17A1Q9UMD9 1497 aaPredicted RBP29.08■■■□□ 2.25
ERBB2-211ENST00000582648 LOC105371045A0A1W2PR82 267 aa29.07■■■□□ 2.24
ERBB2-211ENST00000582648 TTC37Q6PGP7 1564 aa29.06■■■□□ 2.24
ERBB2-211ENST00000582648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.04■■■□□ 2.24
ERBB2-211ENST00000582648 FYCO1Q9BQS8 1478 aa29.04■■■□□ 2.24
ERBB2-211ENST00000582648 CCDC18Q5T9S5 1454 aa29.01■■■□□ 2.23
ERBB2-211ENST00000582648 KIF14Q15058 1648 aa28.99■■■□□ 2.23
ERBB2-211ENST00000582648 CDK11AQ9UQ88 783 aaPredicted RBP28.97■■■□□ 2.23
ERBB2-211ENST00000582648 TROQ12816 1431 aaPredicted RBP28.95■■■□□ 2.23
ERBB2-211ENST00000582648 NEO1Q92859 1461 aa28.91■■■□□ 2.22
ERBB2-211ENST00000582648 MYO5CQ9NQX4 1742 aa28.9■■■□□ 2.22
ERBB2-211ENST00000582648 ARAP3Q8WWN8 1544 aa28.89■■■□□ 2.22
ERBB2-211ENST00000582648 CFAP74Q9C0B2 1584 aa28.89■■■□□ 2.22
ERBB2-211ENST00000582648 FANCAO15360 1455 aa28.88■■■□□ 2.21
ERBB2-211ENST00000582648 PHLDB1Q86UU1 1377 aa28.84■■■□□ 2.21
ERBB2-211ENST00000582648 FRMPD1Q5SYB0 1578 aa28.81■■■□□ 2.2
ERBB2-211ENST00000582648 PLCH2O75038 1416 aa28.8■■■□□ 2.2
ERBB2-211ENST00000582648 AKNAQ7Z591 1439 aa28.8■■■□□ 2.2
ERBB2-211ENST00000582648 RAPGEF3O95398 923 aa28.78■■■□□ 2.2
ERBB2-211ENST00000582648 ARHGAP5Q13017 1502 aa28.76■■■□□ 2.19
ERBB2-211ENST00000582648 RICTORQ6R327 1708 aa28.75■■■□□ 2.19
ERBB2-211ENST00000582648 PREX2Q70Z35 1606 aa28.74■■■□□ 2.19
ERBB2-211ENST00000582648 VPS8Q8N3P4 1428 aa28.74■■■□□ 2.19
ERBB2-211ENST00000582648 CDC42BPBQ9Y5S2 1711 aa28.74■■■□□ 2.19
ERBB2-211ENST00000582648 DENND4BO75064 1496 aaPredicted RBP28.73■■■□□ 2.19
ERBB2-211ENST00000582648 ADGRL1O94910 1474 aa28.73■■■□□ 2.19
ERBB2-211ENST00000582648 CDC42BPAQ5VT25 1732 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms