RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 IGF1RP08069 1367 aa20.32■□□□□ 0.84
CDK5RAP3-223ENST00000582114 CUL7Q14999 1698 aa20.26■□□□□ 0.83
CDK5RAP3-223ENST00000582114 KIAA0586Q9BVV6 1533 aa20.23■□□□□ 0.83
CDK5RAP3-223ENST00000582114 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
CDK5RAP3-223ENST00000582114 KIF13AQ9H1H9 1805 aa20.19■□□□□ 0.82
CDK5RAP3-223ENST00000582114 ADCY10Q96PN6 1610 aa20.17■□□□□ 0.82
CDK5RAP3-223ENST00000582114 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
CDK5RAP3-223ENST00000582114 TTBK1Q5TCY1 1321 aaPredicted RBP20.17■□□□□ 0.82
CDK5RAP3-223ENST00000582114 FAM69CQ0P6D2 419 aa20.13■□□□□ 0.81
CDK5RAP3-223ENST00000582114 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
CDK5RAP3-223ENST00000582114 MAPKBP1O60336 1514 aa20.09■□□□□ 0.81
CDK5RAP3-223ENST00000582114 ABCC10Q5T3U5 1492 aa20.09■□□□□ 0.81
CDK5RAP3-223ENST00000582114 PTPRGP23470 1445 aa20.07■□□□□ 0.8
CDK5RAP3-223ENST00000582114 IQGAP2Q13576 1575 aa20.07■□□□□ 0.8
CDK5RAP3-223ENST00000582114 DIP2BQ9P265 1576 aa20.06■□□□□ 0.8
CDK5RAP3-223ENST00000582114 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
CDK5RAP3-223ENST00000582114 TNIKQ9UKE5 1360 aa20.02■□□□□ 0.8
CDK5RAP3-223ENST00000582114 RAPGEF2Q9Y4G8 1499 aa20■□□□□ 0.79
CDK5RAP3-223ENST00000582114 TSPOAP1O95153 1857 aa19.98■□□□□ 0.79
CDK5RAP3-223ENST00000582114 DISP1Q96F81 1524 aa19.97■□□□□ 0.79
CDK5RAP3-223ENST00000582114 ABCC2Q92887 1545 aa19.95■□□□□ 0.78
CDK5RAP3-223ENST00000582114 UGGT2Q9NYU1 1516 aa19.92■□□□□ 0.78
CDK5RAP3-223ENST00000582114 ASXL2Q76L83 1435 aa19.91■□□□□ 0.78
CDK5RAP3-223ENST00000582114 UACAQ9BZF9 1416 aa19.91■□□□□ 0.78
CDK5RAP3-223ENST00000582114 KDM6BO15054 1643 aa19.9■□□□□ 0.78
CDK5RAP3-223ENST00000582114 KIAA0556O60303 1618 aa19.89■□□□□ 0.77
CDK5RAP3-223ENST00000582114 UHRF1BP1LA0JNW5 1464 aa19.88■□□□□ 0.77
CDK5RAP3-223ENST00000582114 PLB1Q6P1J6 1458 aa19.86■□□□□ 0.77
CDK5RAP3-223ENST00000582114 CTTNBP2Q8WZ74 1663 aa19.85■□□□□ 0.77
CDK5RAP3-223ENST00000582114 ZCCHC11Q5TAX3 1644 aaKnown RBP19.81■□□□□ 0.76
CDK5RAP3-223ENST00000582114 KDM5BQ9UGL1 1544 aa19.81■□□□□ 0.76
CDK5RAP3-223ENST00000582114 GLI2P10070 1586 aa19.79■□□□□ 0.76
CDK5RAP3-223ENST00000582114 PPRC1Q5VV67 1664 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP3-223ENST00000582114 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
CDK5RAP3-223ENST00000582114 EPRSP07814 1512 aaKnown RBP19.77■□□□□ 0.76
CDK5RAP3-223ENST00000582114 GOLGA3Q08378 1498 aa19.74■□□□□ 0.75
CDK5RAP3-223ENST00000582114 MAP3K4Q9Y6R4 1608 aa19.72■□□□□ 0.75
CDK5RAP3-223ENST00000582114 KDM4FA0A1W2PPD8 638 aa19.71■□□□□ 0.75
CDK5RAP3-223ENST00000582114 P3H3Q8IVL6 736 aa19.7■□□□□ 0.74
CDK5RAP3-223ENST00000582114 WDR7Q9Y4E6 1490 aa19.7■□□□□ 0.74
CDK5RAP3-223ENST00000582114 ABCA8O94911 1581 aa19.69■□□□□ 0.74
CDK5RAP3-223ENST00000582114 COL17A1Q9UMD9 1497 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-223ENST00000582114 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
CDK5RAP3-223ENST00000582114 KCNH8Q96L42 1107 aa19.67■□□□□ 0.74
CDK5RAP3-223ENST00000582114 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
CDK5RAP3-223ENST00000582114 TEX14Q8IWB6 1497 aa19.65■□□□□ 0.74
CDK5RAP3-223ENST00000582114 RANGAP1P46060 587 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-223ENST00000582114 FAM9AQ8IZU1 332 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-223ENST00000582114 CD109Q6YHK3 1445 aa19.59■□□□□ 0.73
CDK5RAP3-223ENST00000582114 CFAP43Q8NDM7 1665 aa19.56■□□□□ 0.72
CDK5RAP3-223ENST00000582114 ADGRL1O94910 1474 aa19.55■□□□□ 0.72
CDK5RAP3-223ENST00000582114 SAMD9Q5K651 1589 aa19.55■□□□□ 0.72
CDK5RAP3-223ENST00000582114 ATP10BO94823 1461 aa19.54■□□□□ 0.72
CDK5RAP3-223ENST00000582114 MAGI3Q5TCQ9 1506 aa19.53■□□□□ 0.72
CDK5RAP3-223ENST00000582114 EEA1Q15075 1411 aa19.52■□□□□ 0.72
CDK5RAP3-223ENST00000582114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
CDK5RAP3-223ENST00000582114 HNRNPUL2Q1KMD3 747 aaKnown RBP19.5■□□□□ 0.71
CDK5RAP3-223ENST00000582114 RAPGEF6Q8TEU7 1601 aa19.5■□□□□ 0.71
CDK5RAP3-223ENST00000582114 FHOD3Q2V2M9 1422 aa19.49■□□□□ 0.71
CDK5RAP3-223ENST00000582114 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
CDK5RAP3-223ENST00000582114 NUP153P49790 1475 aaKnown RBP19.42■□□□□ 0.7
CDK5RAP3-223ENST00000582114 ABCA9Q8IUA7 1624 aa19.41■□□□□ 0.7
CDK5RAP3-223ENST00000582114 KIF21BO75037 1637 aa19.4■□□□□ 0.7
CDK5RAP3-223ENST00000582114 ARAP3Q8WWN8 1544 aa19.37■□□□□ 0.69
CDK5RAP3-223ENST00000582114 RAPGEF3O95398 923 aa19.35■□□□□ 0.69
CDK5RAP3-223ENST00000582114 EFCAB5A4FU69 1503 aa19.34■□□□□ 0.69
CDK5RAP3-223ENST00000582114 UBTFP17480 764 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-223ENST00000582114 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
CDK5RAP3-223ENST00000582114 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
CDK5RAP3-223ENST00000582114 NEO1Q92859 1461 aa19.3■□□□□ 0.68
CDK5RAP3-223ENST00000582114 PHLDB1Q86UU1 1377 aa19.3■□□□□ 0.68
CDK5RAP3-223ENST00000582114 HECW2Q9P2P5 1572 aa19.29■□□□□ 0.68
CDK5RAP3-223ENST00000582114 CDK13Q14004 1512 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-223ENST00000582114 ATP1B4Q9UN42 357 aaPredicted RBP19.27■□□□□ 0.68
CDK5RAP3-223ENST00000582114 FRMPD1Q5SYB0 1578 aa19.27■□□□□ 0.67
CDK5RAP3-223ENST00000582114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDK5RAP3-223ENST00000582114 TTC37Q6PGP7 1564 aa19.24■□□□□ 0.67
CDK5RAP3-223ENST00000582114 FANCAO15360 1455 aa19.22■□□□□ 0.67
CDK5RAP3-223ENST00000582114 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
CDK5RAP3-223ENST00000582114 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
CDK5RAP3-223ENST00000582114 ARID4BQ4LE39 1312 aaPredicted RBP19.21■□□□□ 0.67
CDK5RAP3-223ENST00000582114 DENND4BO75064 1496 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP3-223ENST00000582114 RICTORQ6R327 1708 aa19.18■□□□□ 0.66
CDK5RAP3-223ENST00000582114 CFAP74Q9C0B2 1584 aa19.18■□□□□ 0.66
CDK5RAP3-223ENST00000582114 HECW1Q76N89 1606 aa19.18■□□□□ 0.66
CDK5RAP3-223ENST00000582114 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
CDK5RAP3-223ENST00000582114 ADAMTSL3P82987 1691 aa19.17■□□□□ 0.66
CDK5RAP3-223ENST00000582114 ARHGEF40Q8TER5 1519 aa19.15■□□□□ 0.66
CDK5RAP3-223ENST00000582114 PTPRMP28827 1452 aa19.15■□□□□ 0.66
CDK5RAP3-223ENST00000582114 BCORL1Q5H9F3 1711 aa19.14■□□□□ 0.66
CDK5RAP3-223ENST00000582114 MADDQ8WXG6 1647 aa19.13■□□□□ 0.65
CDK5RAP3-223ENST00000582114 ILDR1Q86SU0 546 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP3-223ENST00000582114 PLCH2O75038 1416 aa19.1■□□□□ 0.65
CDK5RAP3-223ENST00000582114 YEATS2Q9ULM3 1422 aa19.1■□□□□ 0.65
CDK5RAP3-223ENST00000582114 KIF14Q15058 1648 aa19.1■□□□□ 0.65
CDK5RAP3-223ENST00000582114 SCAPERQ9BY12 1400 aa19.09■□□□□ 0.65
CDK5RAP3-223ENST00000582114 CDK11AQ9UQ88 783 aaPredicted RBP19.09■□□□□ 0.65
CDK5RAP3-223ENST00000582114 ZFYVE16Q7Z3T8 1539 aa19.09■□□□□ 0.65
CDK5RAP3-223ENST00000582114 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
CDK5RAP3-223ENST00000582114 ZMYM4Q5VZL5 1548 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms