RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 RUSC2Q8N2Y8 1516 aa33.27■■■□□ 2.92
SREBF1-220ENST00000581707 PRG4Q92954 1404 aaPredicted RBP33.22■■■□□ 2.91
SREBF1-220ENST00000581707 KIAA0586Q9BVV6 1533 aa33.19■■■□□ 2.9
SREBF1-220ENST00000581707 TRHP20396 242 aaPredicted RBP33.11■■■□□ 2.89
SREBF1-220ENST00000581707 RAPGEF2Q9Y4G8 1499 aa33.05■■■□□ 2.88
SREBF1-220ENST00000581707 IQGAP2Q13576 1575 aa32.95■■■□□ 2.86
SREBF1-220ENST00000581707 CARMIL2Q6F5E8 1435 aa32.86■■■□□ 2.85
SREBF1-220ENST00000581707 PRXQ9BXM0 1461 aa32.84■■■□□ 2.85
SREBF1-220ENST00000581707 PTPRGP23470 1445 aa32.79■■■□□ 2.84
SREBF1-220ENST00000581707 TNIKQ9UKE5 1360 aa32.78■■■□□ 2.84
SREBF1-220ENST00000581707 CSRNP3Q8WYN3 585 aa32.77■■■□□ 2.84
SREBF1-220ENST00000581707 NPM1P06748 294 aaKnown RBP eCLIP32.76■■■□□ 2.83
SREBF1-220ENST00000581707 UGGT2Q9NYU1 1516 aa32.76■■■□□ 2.83
SREBF1-220ENST00000581707 TTBK1Q5TCY1 1321 aaPredicted RBP32.76■■■□□ 2.83
SREBF1-220ENST00000581707 ADCY10Q96PN6 1610 aa32.74■■■□□ 2.83
SREBF1-220ENST00000581707 DISP1Q96F81 1524 aa32.74■■■□□ 2.83
SREBF1-220ENST00000581707 CTTNBP2Q8WZ74 1663 aa32.74■■■□□ 2.83
SREBF1-220ENST00000581707 EEA1Q15075 1411 aa32.7■■■□□ 2.83
SREBF1-220ENST00000581707 CHIC1Q5VXU3 224 aa32.66■■■□□ 2.82
SREBF1-220ENST00000581707 KIAA0556O60303 1618 aa32.62■■■□□ 2.81
SREBF1-220ENST00000581707 FAM9AQ8IZU1 332 aaPredicted RBP32.6■■■□□ 2.81
SREBF1-220ENST00000581707 MAPKBP1O60336 1514 aa32.6■■■□□ 2.81
SREBF1-220ENST00000581707 KIF13AQ9H1H9 1805 aa32.56■■■□□ 2.8
SREBF1-220ENST00000581707 GOLGA3Q08378 1498 aa32.55■■■□□ 2.8
SREBF1-220ENST00000581707 UACAQ9BZF9 1416 aa32.55■■■□□ 2.8
SREBF1-220ENST00000581707 UHRF1BP1LA0JNW5 1464 aa32.53■■■□□ 2.8
SREBF1-220ENST00000581707 ABCC2Q92887 1545 aa32.52■■■□□ 2.8
SREBF1-220ENST00000581707 ABCC10Q5T3U5 1492 aa32.51■■■□□ 2.79
SREBF1-220ENST00000581707 FAM69CQ0P6D2 419 aa32.49■■■□□ 2.79
SREBF1-220ENST00000581707 DIP2BQ9P265 1576 aa32.42■■■□□ 2.78
SREBF1-220ENST00000581707 KIF21BO75037 1637 aa32.38■■■□□ 2.77
SREBF1-220ENST00000581707 KDM5BQ9UGL1 1544 aa32.37■■■□□ 2.77
SREBF1-220ENST00000581707 PLB1Q6P1J6 1458 aa32.35■■■□□ 2.77
SREBF1-220ENST00000581707 ASXL2Q76L83 1435 aa32.35■■■□□ 2.77
SREBF1-220ENST00000581707 P3H3Q8IVL6 736 aa32.35■■■□□ 2.77
SREBF1-220ENST00000581707 ZCCHC11Q5TAX3 1644 aaKnown RBP32.3■■■□□ 2.76
SREBF1-220ENST00000581707 ABCA8O94911 1581 aa32.3■■■□□ 2.76
SREBF1-220ENST00000581707 SAMD9Q5K651 1589 aa32.29■■■□□ 2.76
SREBF1-220ENST00000581707 RANGAP1P46060 587 aaPredicted RBP32.27■■■□□ 2.76
SREBF1-220ENST00000581707 EHMT2Q96KQ7 1210 aa32.22■■■□□ 2.75
SREBF1-220ENST00000581707 TSPOAP1O95153 1857 aa32.22■■■□□ 2.75
SREBF1-220ENST00000581707 GLI2P10070 1586 aa32.19■■■□□ 2.74
SREBF1-220ENST00000581707 UBTFP17480 764 aaKnown RBP32.19■■■□□ 2.74
SREBF1-220ENST00000581707 EPRSP07814 1512 aaKnown RBP32.16■■■□□ 2.74
SREBF1-220ENST00000581707 WDR7Q9Y4E6 1490 aa32.13■■■□□ 2.73
SREBF1-220ENST00000581707 FHOD3Q2V2M9 1422 aa32.11■■■□□ 2.73
SREBF1-220ENST00000581707 EFCAB5A4FU69 1503 aa32.09■■■□□ 2.73
SREBF1-220ENST00000581707 ARID3CA6NKF2 412 aa32.08■■■□□ 2.73
SREBF1-220ENST00000581707 RAPGEF6Q8TEU7 1601 aa32.07■■■□□ 2.72
SREBF1-220ENST00000581707 ATP10BO94823 1461 aa32.05■■■□□ 2.72
SREBF1-220ENST00000581707 MAP3K4Q9Y6R4 1608 aa32.04■■■□□ 2.72
SREBF1-220ENST00000581707 KCNH8Q96L42 1107 aa32.03■■■□□ 2.72
SREBF1-220ENST00000581707 PPRC1Q5VV67 1664 aaKnown RBP32.02■■■□□ 2.72
SREBF1-220ENST00000581707 KDM6BO15054 1643 aa32.01■■■□□ 2.72
SREBF1-220ENST00000581707 NUP153P49790 1475 aaKnown RBP31.95■■■□□ 2.7
SREBF1-220ENST00000581707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.93■■■□□ 2.7
SREBF1-220ENST00000581707 HNRNPUL2Q1KMD3 747 aaKnown RBP31.93■■■□□ 2.7
SREBF1-220ENST00000581707 TEX14Q8IWB6 1497 aa31.92■■■□□ 2.7
SREBF1-220ENST00000581707 CD109Q6YHK3 1445 aa31.9■■■□□ 2.7
SREBF1-220ENST00000581707 CFAP43Q8NDM7 1665 aa31.89■■■□□ 2.7
SREBF1-220ENST00000581707 ARHGAP35Q9NRY4 1499 aa31.89■■■□□ 2.7
SREBF1-220ENST00000581707 MAGI3Q5TCQ9 1506 aa31.83■■■□□ 2.69
SREBF1-220ENST00000581707 FMN1Q68DA7 1419 aa31.82■■■□□ 2.68
SREBF1-220ENST00000581707 COL17A1Q9UMD9 1497 aaPredicted RBP31.78■■■□□ 2.68
SREBF1-220ENST00000581707 PLEKHD1A6NEE1 506 aa31.78■■■□□ 2.68
SREBF1-220ENST00000581707 ABCA9Q8IUA7 1624 aa31.75■■■□□ 2.67
SREBF1-220ENST00000581707 ATP1B4Q9UN42 357 aaPredicted RBP31.74■■■□□ 2.67
SREBF1-220ENST00000581707 CDK13Q14004 1512 aaKnown RBP31.7■■■□□ 2.67
SREBF1-220ENST00000581707 AEBP2Q6ZN18 517 aaPredicted RBP31.7■■■□□ 2.67
SREBF1-220ENST00000581707 HECW1Q76N89 1606 aa31.69■■■□□ 2.66
SREBF1-220ENST00000581707 CLIP1P30622 1438 aa31.6■■■□□ 2.65
SREBF1-220ENST00000581707 PHLDB1Q86UU1 1377 aa31.58■■■□□ 2.65
SREBF1-220ENST00000581707 CDK11AQ9UQ88 783 aaPredicted RBP31.57■■■□□ 2.64
SREBF1-220ENST00000581707 ARAP3Q8WWN8 1544 aa31.57■■■□□ 2.64
SREBF1-220ENST00000581707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.55■■■□□ 2.64
SREBF1-220ENST00000581707 NEO1Q92859 1461 aa31.54■■■□□ 2.64
SREBF1-220ENST00000581707 CASKIN1Q8WXD9 1431 aa31.53■■■□□ 2.64
SREBF1-220ENST00000581707 LRRIQ1Q96JM4 1722 aa31.52■■■□□ 2.64
SREBF1-220ENST00000581707 PCF11O94913 1555 aaKnown RBP31.5■■■□□ 2.63
SREBF1-220ENST00000581707 TTC37Q6PGP7 1564 aa31.5■■■□□ 2.63
SREBF1-220ENST00000581707 KDM4FA0A1W2PPD8 638 aa31.47■■■□□ 2.63
SREBF1-220ENST00000581707 TROQ12816 1431 aaPredicted RBP31.44■■■□□ 2.62
SREBF1-220ENST00000581707 CCDC18Q5T9S5 1454 aa31.44■■■□□ 2.62
SREBF1-220ENST00000581707 RAPGEF3O95398 923 aa31.43■■■□□ 2.62
SREBF1-220ENST00000581707 FANCAO15360 1455 aa31.43■■■□□ 2.62
SREBF1-220ENST00000581707 FYCO1Q9BQS8 1478 aa31.43■■■□□ 2.62
SREBF1-220ENST00000581707 CFAP74Q9C0B2 1584 aa31.41■■■□□ 2.62
SREBF1-220ENST00000581707 AKNAQ7Z591 1439 aa31.4■■■□□ 2.62
SREBF1-220ENST00000581707 KIF14Q15058 1648 aa31.38■■■□□ 2.61
SREBF1-220ENST00000581707 PLCH2O75038 1416 aa31.38■■■□□ 2.61
SREBF1-220ENST00000581707 CEP162Q5TB80 1403 aa31.37■■■□□ 2.61
SREBF1-220ENST00000581707 LOC105371045A0A1W2PR82 267 aa31.36■■■□□ 2.61
SREBF1-220ENST00000581707 ADGRL1O94910 1474 aa31.33■■■□□ 2.61
SREBF1-220ENST00000581707 MYO5CQ9NQX4 1742 aa31.33■■■□□ 2.61
SREBF1-220ENST00000581707 DENND4BO75064 1496 aaPredicted RBP31.33■■■□□ 2.61
SREBF1-220ENST00000581707 FRMPD1Q5SYB0 1578 aa31.32■■■□□ 2.6
SREBF1-220ENST00000581707 EFCAB2Q5VUJ9 269 aa31.29■■■□□ 2.6
SREBF1-220ENST00000581707 RICTORQ6R327 1708 aa31.27■■■□□ 2.6
SREBF1-220ENST00000581707 SCAPERQ9BY12 1400 aa31.22■■■□□ 2.59
SREBF1-220ENST00000581707 ARHGAP5Q13017 1502 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms