RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 PRG4Q92954 1404 aaPredicted RBP34.46■■■■□ 3.11
SNX11-209ENST00000581705 RUSC2Q8N2Y8 1516 aa34.46■■■■□ 3.11
SNX11-209ENST00000581705 CUL7Q14999 1698 aa34.44■■■■□ 3.1
SNX11-209ENST00000581705 KIAA0586Q9BVV6 1533 aa34.34■■■■□ 3.09
SNX11-209ENST00000581705 CARMIL1Q5VZK9 1371 aa34.32■■■■□ 3.09
SNX11-209ENST00000581705 RAPGEF2Q9Y4G8 1499 aa34.03■■■■□ 3.04
SNX11-209ENST00000581705 IQGAP2Q13576 1575 aa34.02■■■■□ 3.04
SNX11-209ENST00000581705 ADCY10Q96PN6 1610 aa34.01■■■■□ 3.04
SNX11-209ENST00000581705 NPM1P06748 294 aaKnown RBP eCLIP34■■■■□ 3.03
SNX11-209ENST00000581705 CARMIL2Q6F5E8 1435 aa33.98■■■■□ 3.03
SNX11-209ENST00000581705 PTPRGP23470 1445 aa33.97■■■■□ 3.03
SNX11-209ENST00000581705 MAPKBP1O60336 1514 aa33.94■■■■□ 3.02
SNX11-209ENST00000581705 TNIKQ9UKE5 1360 aa33.93■■■■□ 3.02
SNX11-209ENST00000581705 KIF13AQ9H1H9 1805 aa33.93■■■■□ 3.02
SNX11-209ENST00000581705 ABCC10Q5T3U5 1492 aa33.88■■■■□ 3.01
SNX11-209ENST00000581705 DISP1Q96F81 1524 aa33.86■■■■□ 3.01
SNX11-209ENST00000581705 UGGT2Q9NYU1 1516 aa33.84■■■■□ 3.01
SNX11-209ENST00000581705 TTBK1Q5TCY1 1321 aaPredicted RBP33.84■■■■□ 3.01
SNX11-209ENST00000581705 FAM69CQ0P6D2 419 aa33.83■■■■□ 3.01
SNX11-209ENST00000581705 EEA1Q15075 1411 aa33.79■■■■□ 3
SNX11-209ENST00000581705 DIP2BQ9P265 1576 aa33.78■■■■□ 3
SNX11-209ENST00000581705 PRXQ9BXM0 1461 aa33.78■■■■□ 3
SNX11-209ENST00000581705 ABCC2Q92887 1545 aa33.75■■■□□ 2.99
SNX11-209ENST00000581705 UHRF1BP1LA0JNW5 1464 aa33.74■■■□□ 2.99
SNX11-209ENST00000581705 UACAQ9BZF9 1416 aa33.72■■■□□ 2.99
SNX11-209ENST00000581705 KIAA0556O60303 1618 aa33.71■■■□□ 2.99
SNX11-209ENST00000581705 CTTNBP2Q8WZ74 1663 aa33.69■■■□□ 2.98
SNX11-209ENST00000581705 ASXL2Q76L83 1435 aa33.6■■■□□ 2.97
SNX11-209ENST00000581705 PLB1Q6P1J6 1458 aa33.59■■■□□ 2.97
SNX11-209ENST00000581705 GOLGA3Q08378 1498 aa33.58■■■□□ 2.97
SNX11-209ENST00000581705 KDM5BQ9UGL1 1544 aa33.57■■■□□ 2.97
SNX11-209ENST00000581705 CSRNP3Q8WYN3 585 aa33.57■■■□□ 2.96
SNX11-209ENST00000581705 GLI2P10070 1586 aa33.48■■■□□ 2.95
SNX11-209ENST00000581705 TSPOAP1O95153 1857 aa33.48■■■□□ 2.95
SNX11-209ENST00000581705 FAM9AQ8IZU1 332 aaPredicted RBP33.46■■■□□ 2.95
SNX11-209ENST00000581705 ZCCHC11Q5TAX3 1644 aaKnown RBP33.46■■■□□ 2.95
SNX11-209ENST00000581705 EPRSP07814 1512 aaKnown RBP33.4■■■□□ 2.94
SNX11-209ENST00000581705 ABCA8O94911 1581 aa33.4■■■□□ 2.94
SNX11-209ENST00000581705 KDM6BO15054 1643 aa33.4■■■□□ 2.94
SNX11-209ENST00000581705 AEBP2Q6ZN18 517 aaPredicted RBP33.39■■■□□ 2.94
SNX11-209ENST00000581705 PPRC1Q5VV67 1664 aaKnown RBP33.33■■■□□ 2.93
SNX11-209ENST00000581705 WDR7Q9Y4E6 1490 aa33.32■■■□□ 2.92
SNX11-209ENST00000581705 P3H3Q8IVL6 736 aa33.29■■■□□ 2.92
SNX11-209ENST00000581705 KIF21BO75037 1637 aa33.29■■■□□ 2.92
SNX11-209ENST00000581705 MAP3K4Q9Y6R4 1608 aa33.29■■■□□ 2.92
SNX11-209ENST00000581705 SAMD9Q5K651 1589 aa33.27■■■□□ 2.92
SNX11-209ENST00000581705 TEX14Q8IWB6 1497 aa33.19■■■□□ 2.9
SNX11-209ENST00000581705 LOC105371045A0A1W2PR82 267 aa33.15■■■□□ 2.9
SNX11-209ENST00000581705 ATP10BO94823 1461 aa33.13■■■□□ 2.89
SNX11-209ENST00000581705 KCNH8Q96L42 1107 aa33.13■■■□□ 2.89
SNX11-209ENST00000581705 COL17A1Q9UMD9 1497 aaPredicted RBP33.13■■■□□ 2.89
SNX11-209ENST00000581705 ARID3CA6NKF2 412 aa33.09■■■□□ 2.89
SNX11-209ENST00000581705 RANGAP1P46060 587 aaPredicted RBP33.09■■■□□ 2.89
SNX11-209ENST00000581705 CD109Q6YHK3 1445 aa33.09■■■□□ 2.89
SNX11-209ENST00000581705 CFAP43Q8NDM7 1665 aa33.07■■■□□ 2.88
SNX11-209ENST00000581705 RAPGEF6Q8TEU7 1601 aa33.07■■■□□ 2.88
SNX11-209ENST00000581705 MAGI3Q5TCQ9 1506 aa33.06■■■□□ 2.88
SNX11-209ENST00000581705 FHOD3Q2V2M9 1422 aa33.05■■■□□ 2.88
SNX11-209ENST00000581705 EFCAB5A4FU69 1503 aa33■■■□□ 2.87
SNX11-209ENST00000581705 KDM4FA0A1W2PPD8 638 aa32.99■■■□□ 2.87
SNX11-209ENST00000581705 NUP153P49790 1475 aaKnown RBP32.99■■■□□ 2.87
SNX11-209ENST00000581705 UBTFP17480 764 aaKnown RBP32.92■■■□□ 2.86
SNX11-209ENST00000581705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.91■■■□□ 2.86
SNX11-209ENST00000581705 HNRNPUL2Q1KMD3 747 aaKnown RBP32.91■■■□□ 2.86
SNX11-209ENST00000581705 ABCA9Q8IUA7 1624 aa32.89■■■□□ 2.86
SNX11-209ENST00000581705 EHMT2Q96KQ7 1210 aa32.88■■■□□ 2.85
SNX11-209ENST00000581705 ARAP3Q8WWN8 1544 aa32.8■■■□□ 2.84
SNX11-209ENST00000581705 PLEKHD1A6NEE1 506 aa32.78■■■□□ 2.84
SNX11-209ENST00000581705 PHLDB1Q86UU1 1377 aa32.78■■■□□ 2.84
SNX11-209ENST00000581705 ADGRL1O94910 1474 aa32.77■■■□□ 2.84
SNX11-209ENST00000581705 ARHGAP35Q9NRY4 1499 aa32.75■■■□□ 2.83
SNX11-209ENST00000581705 NEO1Q92859 1461 aa32.72■■■□□ 2.83
SNX11-209ENST00000581705 FMN1Q68DA7 1419 aa32.71■■■□□ 2.83
SNX11-209ENST00000581705 CEP162Q5TB80 1403 aa32.7■■■□□ 2.83
SNX11-209ENST00000581705 CDK13Q14004 1512 aaKnown RBP32.66■■■□□ 2.82
SNX11-209ENST00000581705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.62■■■□□ 2.81
SNX11-209ENST00000581705 RAPGEF3O95398 923 aa32.6■■■□□ 2.81
SNX11-209ENST00000581705 HECW1Q76N89 1606 aa32.6■■■□□ 2.81
SNX11-209ENST00000581705 ATP1B4Q9UN42 357 aaPredicted RBP32.58■■■□□ 2.81
SNX11-209ENST00000581705 CLIP1P30622 1438 aa32.57■■■□□ 2.81
SNX11-209ENST00000581705 TTC37Q6PGP7 1564 aa32.56■■■□□ 2.8
SNX11-209ENST00000581705 FANCAO15360 1455 aa32.52■■■□□ 2.8
SNX11-209ENST00000581705 FRMPD1Q5SYB0 1578 aa32.52■■■□□ 2.8
SNX11-209ENST00000581705 AKNAQ7Z591 1439 aa32.51■■■□□ 2.79
SNX11-209ENST00000581705 CDK11AQ9UQ88 783 aaPredicted RBP32.5■■■□□ 2.79
SNX11-209ENST00000581705 CFAP74Q9C0B2 1584 aa32.49■■■□□ 2.79
SNX11-209ENST00000581705 DENND4BO75064 1496 aaPredicted RBP32.47■■■□□ 2.79
SNX11-209ENST00000581705 PLCH2O75038 1416 aa32.44■■■□□ 2.78
SNX11-209ENST00000581705 RICTORQ6R327 1708 aa32.41■■■□□ 2.78
SNX11-209ENST00000581705 TROQ12816 1431 aaPredicted RBP32.41■■■□□ 2.78
SNX11-209ENST00000581705 CASKIN1Q8WXD9 1431 aa32.4■■■□□ 2.78
SNX11-209ENST00000581705 LRRIQ1Q96JM4 1722 aa32.39■■■□□ 2.77
SNX11-209ENST00000581705 KIF14Q15058 1648 aa32.36■■■□□ 2.77
SNX11-209ENST00000581705 PCF11O94913 1555 aaKnown RBP32.36■■■□□ 2.77
SNX11-209ENST00000581705 ARHGEF40Q8TER5 1519 aa32.33■■■□□ 2.77
SNX11-209ENST00000581705 ZMYM4Q5VZL5 1548 aa32.32■■■□□ 2.77
SNX11-209ENST00000581705 CCDC18Q5T9S5 1454 aa32.32■■■□□ 2.76
SNX11-209ENST00000581705 MYO5CQ9NQX4 1742 aa32.31■■■□□ 2.76
SNX11-209ENST00000581705 SCAPERQ9BY12 1400 aa32.31■■■□□ 2.76
SNX11-209ENST00000581705 EFCAB2Q5VUJ9 269 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms