RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 KIF13AQ9H1H9 1805 aa26.1■■□□□ 1.77
SCN4A-202ENST00000581514 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
SCN4A-202ENST00000581514 CUL7Q14999 1698 aa26.08■■□□□ 1.77
SCN4A-202ENST00000581514 KIAA0586Q9BVV6 1533 aa26.05■■□□□ 1.76
SCN4A-202ENST00000581514 AEBP2Q6ZN18 517 aaPredicted RBP26.03■■□□□ 1.76
SCN4A-202ENST00000581514 ADCY10Q96PN6 1610 aa25.99■■□□□ 1.75
SCN4A-202ENST00000581514 NPM1P06748 294 aaKnown RBP eCLIP25.97■■□□□ 1.75
SCN4A-202ENST00000581514 MAPKBP1O60336 1514 aa25.96■■□□□ 1.75
SCN4A-202ENST00000581514 ABCC10Q5T3U5 1492 aa25.95■■□□□ 1.74
SCN4A-202ENST00000581514 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
SCN4A-202ENST00000581514 FAM69CQ0P6D2 419 aa25.92■■□□□ 1.74
SCN4A-202ENST00000581514 DIP2BQ9P265 1576 aa25.89■■□□□ 1.73
SCN4A-202ENST00000581514 PTPRGP23470 1445 aa25.83■■□□□ 1.73
SCN4A-202ENST00000581514 IQGAP2Q13576 1575 aa25.8■■□□□ 1.72
SCN4A-202ENST00000581514 CARMIL2Q6F5E8 1435 aa25.8■■□□□ 1.72
SCN4A-202ENST00000581514 TNIKQ9UKE5 1360 aa25.78■■□□□ 1.72
SCN4A-202ENST00000581514 TTBK1Q5TCY1 1321 aaPredicted RBP25.76■■□□□ 1.71
SCN4A-202ENST00000581514 TSPOAP1O95153 1857 aa25.73■■□□□ 1.71
SCN4A-202ENST00000581514 ABCC2Q92887 1545 aa25.71■■□□□ 1.71
SCN4A-202ENST00000581514 RAPGEF2Q9Y4G8 1499 aa25.69■■□□□ 1.7
SCN4A-202ENST00000581514 DISP1Q96F81 1524 aa25.68■■□□□ 1.7
SCN4A-202ENST00000581514 KDM6BO15054 1643 aa25.68■■□□□ 1.7
SCN4A-202ENST00000581514 UHRF1BP1LA0JNW5 1464 aa25.66■■□□□ 1.7
SCN4A-202ENST00000581514 ASXL2Q76L83 1435 aa25.63■■□□□ 1.69
SCN4A-202ENST00000581514 UACAQ9BZF9 1416 aa25.63■■□□□ 1.69
SCN4A-202ENST00000581514 UGGT2Q9NYU1 1516 aa25.63■■□□□ 1.69
SCN4A-202ENST00000581514 PLB1Q6P1J6 1458 aa25.62■■□□□ 1.69
SCN4A-202ENST00000581514 GLI2P10070 1586 aa25.58■■□□□ 1.69
SCN4A-202ENST00000581514 KIAA0556O60303 1618 aa25.57■■□□□ 1.68
SCN4A-202ENST00000581514 PPRC1Q5VV67 1664 aaKnown RBP25.55■■□□□ 1.68
SCN4A-202ENST00000581514 KDM5BQ9UGL1 1544 aa25.54■■□□□ 1.68
SCN4A-202ENST00000581514 CTTNBP2Q8WZ74 1663 aa25.51■■□□□ 1.67
SCN4A-202ENST00000581514 ZCCHC11Q5TAX3 1644 aaKnown RBP25.5■■□□□ 1.67
SCN4A-202ENST00000581514 EPRSP07814 1512 aaKnown RBP25.48■■□□□ 1.67
SCN4A-202ENST00000581514 KDM4FA0A1W2PPD8 638 aa25.47■■□□□ 1.67
SCN4A-202ENST00000581514 MAP3K4Q9Y6R4 1608 aa25.45■■□□□ 1.66
SCN4A-202ENST00000581514 GOLGA3Q08378 1498 aa25.4■■□□□ 1.66
SCN4A-202ENST00000581514 PRXQ9BXM0 1461 aa25.4■■□□□ 1.66
SCN4A-202ENST00000581514 WDR7Q9Y4E6 1490 aa25.37■■□□□ 1.65
SCN4A-202ENST00000581514 TEX14Q8IWB6 1497 aa25.36■■□□□ 1.65
SCN4A-202ENST00000581514 COL17A1Q9UMD9 1497 aaPredicted RBP25.36■■□□□ 1.65
SCN4A-202ENST00000581514 ABCA8O94911 1581 aa25.35■■□□□ 1.65
SCN4A-202ENST00000581514 ADGRL1O94910 1474 aa25.25■■□□□ 1.63
SCN4A-202ENST00000581514 CFAP43Q8NDM7 1665 aa25.24■■□□□ 1.63
SCN4A-202ENST00000581514 CD109Q6YHK3 1445 aa25.22■■□□□ 1.63
SCN4A-202ENST00000581514 KCNH8Q96L42 1107 aa25.22■■□□□ 1.63
SCN4A-202ENST00000581514 MAGI3Q5TCQ9 1506 aa25.22■■□□□ 1.63
SCN4A-202ENST00000581514 P3H3Q8IVL6 736 aa25.17■■□□□ 1.62
SCN4A-202ENST00000581514 CSRNP3Q8WYN3 585 aa25.17■■□□□ 1.62
SCN4A-202ENST00000581514 FAM9AQ8IZU1 332 aaPredicted RBP25.15■■□□□ 1.62
SCN4A-202ENST00000581514 SAMD9Q5K651 1589 aa25.13■■□□□ 1.61
SCN4A-202ENST00000581514 ATP10BO94823 1461 aa25.12■■□□□ 1.61
SCN4A-202ENST00000581514 ARID3CA6NKF2 412 aa25.11■■□□□ 1.61
SCN4A-202ENST00000581514 RAPGEF6Q8TEU7 1601 aa25.05■■□□□ 1.6
SCN4A-202ENST00000581514 EEA1Q15075 1411 aa25.05■■□□□ 1.6
SCN4A-202ENST00000581514 ABCA9Q8IUA7 1624 aa25.03■■□□□ 1.6
SCN4A-202ENST00000581514 ARAP3Q8WWN8 1544 aa25.02■■□□□ 1.6
SCN4A-202ENST00000581514 KIF21BO75037 1637 aa24.97■■□□□ 1.59
SCN4A-202ENST00000581514 NUP153P49790 1475 aaKnown RBP24.96■■□□□ 1.59
SCN4A-202ENST00000581514 PHLDB1Q86UU1 1377 aa24.95■■□□□ 1.59
SCN4A-202ENST00000581514 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
SCN4A-202ENST00000581514 FHOD3Q2V2M9 1422 aa24.95■■□□□ 1.58
SCN4A-202ENST00000581514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
SCN4A-202ENST00000581514 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
SCN4A-202ENST00000581514 HECW2Q9P2P5 1572 aa24.93■■□□□ 1.58
SCN4A-202ENST00000581514 NEO1Q92859 1461 aa24.9■■□□□ 1.58
SCN4A-202ENST00000581514 RAPGEF3O95398 923 aa24.85■■□□□ 1.57
SCN4A-202ENST00000581514 EFCAB5A4FU69 1503 aa24.85■■□□□ 1.57
SCN4A-202ENST00000581514 PLEKHD1A6NEE1 506 aa24.82■■□□□ 1.56
SCN4A-202ENST00000581514 FRMPD1Q5SYB0 1578 aa24.82■■□□□ 1.56
SCN4A-202ENST00000581514 ILDR1Q86SU0 546 aaPredicted RBP24.78■■□□□ 1.56
SCN4A-202ENST00000581514 ADAMTSL3P82987 1691 aa24.78■■□□□ 1.56
SCN4A-202ENST00000581514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.75■■□□□ 1.55
SCN4A-202ENST00000581514 RICTORQ6R327 1708 aa24.72■■□□□ 1.55
SCN4A-202ENST00000581514 CFAP74Q9C0B2 1584 aa24.72■■□□□ 1.55
SCN4A-202ENST00000581514 DENND4BO75064 1496 aaPredicted RBP24.72■■□□□ 1.55
SCN4A-202ENST00000581514 AKNAQ7Z591 1439 aa24.72■■□□□ 1.55
SCN4A-202ENST00000581514 BCORL1Q5H9F3 1711 aa24.72■■□□□ 1.55
SCN4A-202ENST00000581514 TTC37Q6PGP7 1564 aa24.71■■□□□ 1.55
SCN4A-202ENST00000581514 FANCAO15360 1455 aa24.71■■□□□ 1.55
SCN4A-202ENST00000581514 PTPRMP28827 1452 aa24.71■■□□□ 1.55
SCN4A-202ENST00000581514 CDK13Q14004 1512 aaKnown RBP24.71■■□□□ 1.55
SCN4A-202ENST00000581514 ARHGEF40Q8TER5 1519 aa24.69■■□□□ 1.54
SCN4A-202ENST00000581514 ARID4BQ4LE39 1312 aaPredicted RBP24.68■■□□□ 1.54
SCN4A-202ENST00000581514 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
SCN4A-202ENST00000581514 EHMT2Q96KQ7 1210 aa24.66■■□□□ 1.54
SCN4A-202ENST00000581514 MADDQ8WXG6 1647 aa24.65■■□□□ 1.54
SCN4A-202ENST00000581514 FMN1Q68DA7 1419 aa24.62■■□□□ 1.53
SCN4A-202ENST00000581514 ZMYM4Q5VZL5 1548 aa24.62■■□□□ 1.53
SCN4A-202ENST00000581514 ARHGAP35Q9NRY4 1499 aa24.62■■□□□ 1.53
SCN4A-202ENST00000581514 HECW1Q76N89 1606 aa24.61■■□□□ 1.53
SCN4A-202ENST00000581514 CHIC1Q5VXU3 224 aa24.6■■□□□ 1.53
SCN4A-202ENST00000581514 ATP1B4Q9UN42 357 aaPredicted RBP24.59■■□□□ 1.53
SCN4A-202ENST00000581514 PLCH2O75038 1416 aa24.59■■□□□ 1.53
SCN4A-202ENST00000581514 ZFYVE16Q7Z3T8 1539 aa24.57■■□□□ 1.52
SCN4A-202ENST00000581514 RIMS1Q86UR5 1692 aaKnown RBP24.56■■□□□ 1.52
SCN4A-202ENST00000581514 YEATS2Q9ULM3 1422 aa24.56■■□□□ 1.52
SCN4A-202ENST00000581514 MAGI2Q86UL8 1455 aa24.55■■□□□ 1.52
SCN4A-202ENST00000581514 SCAPERQ9BY12 1400 aa24.54■■□□□ 1.52
SCN4A-202ENST00000581514 SIGLEC1Q9BZZ2 1709 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms