RNA–Protein interactions for RNA: ENST00000581276.5

GDPD1-206, Transcript of glycerophosphodiester phosphodiesterase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GDPD1, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD1-206ENST00000581276 SHROOM2Q13796 1616 aa18.4■□□□□ 0.54
GDPD1-206ENST00000581276 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
GDPD1-206ENST00000581276 KIF13AQ9H1H9 1805 aa18.37■□□□□ 0.53
GDPD1-206ENST00000581276 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
GDPD1-206ENST00000581276 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
GDPD1-206ENST00000581276 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
GDPD1-206ENST00000581276 PRG4Q92954 1404 aaPredicted RBP18.28■□□□□ 0.52
GDPD1-206ENST00000581276 TOP2BQ02880 1626 aa18.27■□□□□ 0.52
GDPD1-206ENST00000581276 JPH4Q96JJ6 628 aa18.25■□□□□ 0.51
GDPD1-206ENST00000581276 ABCC10Q5T3U5 1492 aa18.22■□□□□ 0.51
GDPD1-206ENST00000581276 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
GDPD1-206ENST00000581276 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
GDPD1-206ENST00000581276 MAPKBP1O60336 1514 aa18.18■□□□□ 0.5
GDPD1-206ENST00000581276 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
GDPD1-206ENST00000581276 DIP2BQ9P265 1576 aa18.16■□□□□ 0.5
GDPD1-206ENST00000581276 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
GDPD1-206ENST00000581276 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
GDPD1-206ENST00000581276 KDM4FA0A1W2PPD8 638 aa18.11■□□□□ 0.49
GDPD1-206ENST00000581276 KDM6BO15054 1643 aa18.1■□□□□ 0.49
GDPD1-206ENST00000581276 TSPOAP1O95153 1857 aa18.05■□□□□ 0.48
GDPD1-206ENST00000581276 KIAA0586Q9BVV6 1533 aa18.03■□□□□ 0.48
GDPD1-206ENST00000581276 IGF1RP08069 1367 aa17.96■□□□□ 0.47
GDPD1-206ENST00000581276 ILDR1Q86SU0 546 aaPredicted RBP17.96■□□□□ 0.47
GDPD1-206ENST00000581276 PTPRGP23470 1445 aa17.95■□□□□ 0.46
GDPD1-206ENST00000581276 CUL7Q14999 1698 aa17.94■□□□□ 0.46
GDPD1-206ENST00000581276 MAPK8IP2Q13387 824 aaPredicted RBP17.93■□□□□ 0.46
GDPD1-206ENST00000581276 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
GDPD1-206ENST00000581276 ABCC2Q92887 1545 aa17.9■□□□□ 0.46
GDPD1-206ENST00000581276 GLI2P10070 1586 aa17.89■□□□□ 0.45
GDPD1-206ENST00000581276 PPRC1Q5VV67 1664 aaKnown RBP17.89■□□□□ 0.45
GDPD1-206ENST00000581276 TNIKQ9UKE5 1360 aa17.88■□□□□ 0.45
GDPD1-206ENST00000581276 ASXL2Q76L83 1435 aa17.88■□□□□ 0.45
GDPD1-206ENST00000581276 PLB1Q6P1J6 1458 aa17.88■□□□□ 0.45
GDPD1-206ENST00000581276 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
GDPD1-206ENST00000581276 CARMIL2Q6F5E8 1435 aa17.87■□□□□ 0.45
GDPD1-206ENST00000581276 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
GDPD1-206ENST00000581276 ADGRL1O94910 1474 aa17.86■□□□□ 0.45
GDPD1-206ENST00000581276 UHRF1BP1LA0JNW5 1464 aa17.83■□□□□ 0.45
GDPD1-206ENST00000581276 CARMIL1Q5VZK9 1371 aa17.82■□□□□ 0.44
GDPD1-206ENST00000581276 UACAQ9BZF9 1416 aa17.8■□□□□ 0.44
GDPD1-206ENST00000581276 IQGAP2Q13576 1575 aa17.79■□□□□ 0.44
GDPD1-206ENST00000581276 COL17A1Q9UMD9 1497 aaPredicted RBP17.79■□□□□ 0.44
GDPD1-206ENST00000581276 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
GDPD1-206ENST00000581276 MAP3K4Q9Y6R4 1608 aa17.78■□□□□ 0.44
GDPD1-206ENST00000581276 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.43
GDPD1-206ENST00000581276 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
GDPD1-206ENST00000581276 KDM5BQ9UGL1 1544 aa17.75■□□□□ 0.43
GDPD1-206ENST00000581276 DISP1Q96F81 1524 aa17.74■□□□□ 0.43
GDPD1-206ENST00000581276 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
GDPD1-206ENST00000581276 ZCCHC11Q5TAX3 1644 aaKnown RBP17.71■□□□□ 0.43
GDPD1-206ENST00000581276 UGGT2Q9NYU1 1516 aa17.67■□□□□ 0.42
GDPD1-206ENST00000581276 KIAA0556O60303 1618 aa17.64■□□□□ 0.41
GDPD1-206ENST00000581276 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
GDPD1-206ENST00000581276 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
GDPD1-206ENST00000581276 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
GDPD1-206ENST00000581276 CD109Q6YHK3 1445 aa17.58■□□□□ 0.41
GDPD1-206ENST00000581276 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.4
GDPD1-206ENST00000581276 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
GDPD1-206ENST00000581276 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
GDPD1-206ENST00000581276 ABCA8O94911 1581 aa17.51■□□□□ 0.39
GDPD1-206ENST00000581276 KIF21BO75037 1637 aa17.5■□□□□ 0.39
GDPD1-206ENST00000581276 GOLGA3Q08378 1498 aa17.5■□□□□ 0.39
GDPD1-206ENST00000581276 FBXO41Q8TF61 875 aa17.5■□□□□ 0.39
GDPD1-206ENST00000581276 CTTNBP2Q8WZ74 1663 aa17.5■□□□□ 0.39
GDPD1-206ENST00000581276 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
GDPD1-206ENST00000581276 PTPRMP28827 1452 aa17.41■□□□□ 0.38
GDPD1-206ENST00000581276 ADAMTSL3P82987 1691 aa17.41■□□□□ 0.38
GDPD1-206ENST00000581276 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
GDPD1-206ENST00000581276 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
GDPD1-206ENST00000581276 ATP10BO94823 1461 aa17.37■□□□□ 0.37
GDPD1-206ENST00000581276 ABCA9Q8IUA7 1624 aa17.36■□□□□ 0.37
GDPD1-206ENST00000581276 ARID3CA6NKF2 412 aa17.34■□□□□ 0.37
GDPD1-206ENST00000581276 RAPGEF3O95398 923 aa17.34■□□□□ 0.37
GDPD1-206ENST00000581276 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
GDPD1-206ENST00000581276 BCORL1Q5H9F3 1711 aa17.33■□□□□ 0.36
GDPD1-206ENST00000581276 NEO1Q92859 1461 aa17.32■□□□□ 0.36
GDPD1-206ENST00000581276 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
GDPD1-206ENST00000581276 MADDQ8WXG6 1647 aa17.29■□□□□ 0.36
GDPD1-206ENST00000581276 P3H3Q8IVL6 736 aa17.29■□□□□ 0.36
GDPD1-206ENST00000581276 ARID4BQ4LE39 1312 aaPredicted RBP17.28■□□□□ 0.36
GDPD1-206ENST00000581276 LMTK3Q96Q04 1460 aa17.28■□□□□ 0.36
GDPD1-206ENST00000581276 FRMPD1Q5SYB0 1578 aa17.28■□□□□ 0.36
GDPD1-206ENST00000581276 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
GDPD1-206ENST00000581276 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
GDPD1-206ENST00000581276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
GDPD1-206ENST00000581276 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
GDPD1-206ENST00000581276 SAMD9Q5K651 1589 aa17.23■□□□□ 0.35
GDPD1-206ENST00000581276 RIMS1Q86UR5 1692 aaKnown RBP17.22■□□□□ 0.35
GDPD1-206ENST00000581276 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.34
GDPD1-206ENST00000581276 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
GDPD1-206ENST00000581276 DENND4BO75064 1496 aaPredicted RBP17.19■□□□□ 0.34
GDPD1-206ENST00000581276 RICTORQ6R327 1708 aa17.19■□□□□ 0.34
GDPD1-206ENST00000581276 NUP153P49790 1475 aaKnown RBP17.18■□□□□ 0.34
GDPD1-206ENST00000581276 HSPA2P54652 639 aa17.17■□□□□ 0.34
GDPD1-206ENST00000581276 FHOD3Q2V2M9 1422 aa17.16■□□□□ 0.34
GDPD1-206ENST00000581276 POGZQ7Z3K3 1410 aa17.16■□□□□ 0.34
GDPD1-206ENST00000581276 AKNAQ7Z591 1439 aa17.16■□□□□ 0.34
GDPD1-206ENST00000581276 CFAP74Q9C0B2 1584 aa17.15■□□□□ 0.34
GDPD1-206ENST00000581276 FANCAO15360 1455 aa17.14■□□□□ 0.33
GDPD1-206ENST00000581276 PLEKHD1A6NEE1 506 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms