RNA–Protein interactions for RNA: ENST00000581189.1

NDEL1-210, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-210ENST00000581189 CARMIL1Q5VZK9 1371 aa11.32□□□□□ -0.6
NDEL1-210ENST00000581189 CEP170Q5SW79 1584 aa11.31□□□□□ -0.6
NDEL1-210ENST00000581189 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
NDEL1-210ENST00000581189 CUL7Q14999 1698 aa11.3□□□□□ -0.6
NDEL1-210ENST00000581189 RIMBP3CA6NJZ7 1639 aa11.29□□□□□ -0.6
NDEL1-210ENST00000581189 RIMBP3BA6NNM3 1639 aa11.29□□□□□ -0.6
NDEL1-210ENST00000581189 RIMBP3Q9UFD9 1639 aa11.29□□□□□ -0.6
NDEL1-210ENST00000581189 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
NDEL1-210ENST00000581189 RAPGEF2Q9Y4G8 1499 aa11.25□□□□□ -0.61
NDEL1-210ENST00000581189 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
NDEL1-210ENST00000581189 JPH4Q96JJ6 628 aa11.24□□□□□ -0.61
NDEL1-210ENST00000581189 KIAA0586Q9BVV6 1533 aa11.24□□□□□ -0.61
NDEL1-210ENST00000581189 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
NDEL1-210ENST00000581189 ARAP1Q96P48 1450 aa11.23□□□□□ -0.61
NDEL1-210ENST00000581189 EEA1Q15075 1411 aa11.22□□□□□ -0.61
NDEL1-210ENST00000581189 ERCC6L2Q5T890 1561 aa11.21□□□□□ -0.61
NDEL1-210ENST00000581189 CYB5RLQ6IPT4 315 aa11.21□□□□□ -0.61
NDEL1-210ENST00000581189 PRG4Q92954 1404 aaPredicted RBP11.19□□□□□ -0.62
NDEL1-210ENST00000581189 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
NDEL1-210ENST00000581189 IQGAP2Q13576 1575 aa11.13□□□□□ -0.63
NDEL1-210ENST00000581189 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
NDEL1-210ENST00000581189 DISP1Q96F81 1524 aa11.11□□□□□ -0.63
NDEL1-210ENST00000581189 KIF21BO75037 1637 aa11.09□□□□□ -0.63
NDEL1-210ENST00000581189 CARMIL2Q6F5E8 1435 aa11.08□□□□□ -0.64
NDEL1-210ENST00000581189 TNIKQ9UKE5 1360 aa11.07□□□□□ -0.64
NDEL1-210ENST00000581189 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
NDEL1-210ENST00000581189 PTPRGP23470 1445 aa11.06□□□□□ -0.64
NDEL1-210ENST00000581189 KIAA0556O60303 1618 aa11.04□□□□□ -0.64
NDEL1-210ENST00000581189 GOLGA3Q08378 1498 aa11.02□□□□□ -0.65
NDEL1-210ENST00000581189 ADCY10Q96PN6 1610 aa11□□□□□ -0.65
NDEL1-210ENST00000581189 UACAQ9BZF9 1416 aa11□□□□□ -0.65
NDEL1-210ENST00000581189 UHRF1BP1LA0JNW5 1464 aa11□□□□□ -0.65
NDEL1-210ENST00000581189 SAMD9Q5K651 1589 aa10.99□□□□□ -0.65
NDEL1-210ENST00000581189 UBTFP17480 764 aaKnown RBP10.99□□□□□ -0.65
NDEL1-210ENST00000581189 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
NDEL1-210ENST00000581189 TTBK1Q5TCY1 1321 aaPredicted RBP10.98□□□□□ -0.65
NDEL1-210ENST00000581189 P3H3Q8IVL6 736 aa10.97□□□□□ -0.65
NDEL1-210ENST00000581189 ABCC2Q92887 1545 aa10.95□□□□□ -0.66
NDEL1-210ENST00000581189 PLB1Q6P1J6 1458 aa10.95□□□□□ -0.66
NDEL1-210ENST00000581189 ABCA8O94911 1581 aa10.94□□□□□ -0.66
NDEL1-210ENST00000581189 KDM5BQ9UGL1 1544 aa10.94□□□□□ -0.66
NDEL1-210ENST00000581189 NPM1P06748 294 aaKnown RBP eCLIP10.94□□□□□ -0.66
NDEL1-210ENST00000581189 MAPKBP1O60336 1514 aa10.94□□□□□ -0.66
NDEL1-210ENST00000581189 RANGAP1P46060 587 aaPredicted RBP10.93□□□□□ -0.66
NDEL1-210ENST00000581189 EFCAB5A4FU69 1503 aa10.93□□□□□ -0.66
NDEL1-210ENST00000581189 FHOD3Q2V2M9 1422 aa10.92□□□□□ -0.66
NDEL1-210ENST00000581189 TRHP20396 242 aaPredicted RBP10.92□□□□□ -0.66
NDEL1-210ENST00000581189 ARHGAP35Q9NRY4 1499 aa10.92□□□□□ -0.66
NDEL1-210ENST00000581189 ABCC10Q5T3U5 1492 aa10.9□□□□□ -0.66
NDEL1-210ENST00000581189 ASXL2Q76L83 1435 aa10.89□□□□□ -0.67
NDEL1-210ENST00000581189 LOC105371045A0A1W2PR82 267 aa10.88□□□□□ -0.67
NDEL1-210ENST00000581189 ATP10BO94823 1461 aa10.87□□□□□ -0.67
NDEL1-210ENST00000581189 ZCCHC11Q5TAX3 1644 aaKnown RBP10.87□□□□□ -0.67
NDEL1-210ENST00000581189 FAM69CQ0P6D2 419 aa10.86□□□□□ -0.67
NDEL1-210ENST00000581189 NUP153P49790 1475 aaKnown RBP10.86□□□□□ -0.67
NDEL1-210ENST00000581189 DIP2BQ9P265 1576 aa10.86□□□□□ -0.67
NDEL1-210ENST00000581189 RAPGEF6Q8TEU7 1601 aa10.85□□□□□ -0.67
NDEL1-210ENST00000581189 KIF13AQ9H1H9 1805 aa10.84□□□□□ -0.67
NDEL1-210ENST00000581189 CLIP1P30622 1438 aa10.84□□□□□ -0.67
NDEL1-210ENST00000581189 FMN1Q68DA7 1419 aa10.84□□□□□ -0.67
NDEL1-210ENST00000581189 EPRSP07814 1512 aaKnown RBP10.83□□□□□ -0.68
NDEL1-210ENST00000581189 GLI2P10070 1586 aa10.82□□□□□ -0.68
NDEL1-210ENST00000581189 WDR7Q9Y4E6 1490 aa10.82□□□□□ -0.68
NDEL1-210ENST00000581189 ARID3CA6NKF2 412 aa10.82□□□□□ -0.68
NDEL1-210ENST00000581189 CEP162Q5TB80 1403 aa10.79□□□□□ -0.68
NDEL1-210ENST00000581189 CASKIN1Q8WXD9 1431 aa10.78□□□□□ -0.68
NDEL1-210ENST00000581189 KCNH8Q96L42 1107 aa10.78□□□□□ -0.68
NDEL1-210ENST00000581189 HRCP23327 699 aa10.77□□□□□ -0.69
NDEL1-210ENST00000581189 CDK13Q14004 1512 aaKnown RBP10.75□□□□□ -0.69
NDEL1-210ENST00000581189 PLEKHD1A6NEE1 506 aa10.75□□□□□ -0.69
NDEL1-210ENST00000581189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.75□□□□□ -0.69
NDEL1-210ENST00000581189 HNRNPUL2Q1KMD3 747 aaKnown RBP10.75□□□□□ -0.69
NDEL1-210ENST00000581189 MAP3K4Q9Y6R4 1608 aa10.75□□□□□ -0.69
NDEL1-210ENST00000581189 HECW1Q76N89 1606 aa10.74□□□□□ -0.69
NDEL1-210ENST00000581189 PPRC1Q5VV67 1664 aaKnown RBP10.74□□□□□ -0.69
NDEL1-210ENST00000581189 ATP1B4Q9UN42 357 aaPredicted RBP10.73□□□□□ -0.69
NDEL1-210ENST00000581189 CD109Q6YHK3 1445 aa10.73□□□□□ -0.69
NDEL1-210ENST00000581189 FYCO1Q9BQS8 1478 aa10.73□□□□□ -0.69
NDEL1-210ENST00000581189 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
NDEL1-210ENST00000581189 MAGI3Q5TCQ9 1506 aa10.72□□□□□ -0.69
NDEL1-210ENST00000581189 LRRIQ1Q96JM4 1722 aa10.72□□□□□ -0.69
NDEL1-210ENST00000581189 ABCA9Q8IUA7 1624 aa10.71□□□□□ -0.69
NDEL1-210ENST00000581189 CFAP43Q8NDM7 1665 aa10.7□□□□□ -0.7
NDEL1-210ENST00000581189 CCDC18Q5T9S5 1454 aa10.7□□□□□ -0.7
NDEL1-210ENST00000581189 CDK11AQ9UQ88 783 aaPredicted RBP10.7□□□□□ -0.7
NDEL1-210ENST00000581189 COL17A1Q9UMD9 1497 aaPredicted RBP10.69□□□□□ -0.7
NDEL1-210ENST00000581189 TROQ12816 1431 aaPredicted RBP10.69□□□□□ -0.7
NDEL1-210ENST00000581189 TSPOAP1O95153 1857 aa10.69□□□□□ -0.7
NDEL1-210ENST00000581189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.68□□□□□ -0.7
NDEL1-210ENST00000581189 TEX14Q8IWB6 1497 aa10.68□□□□□ -0.7
NDEL1-210ENST00000581189 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
NDEL1-210ENST00000581189 PLCH2O75038 1416 aa10.65□□□□□ -0.7
NDEL1-210ENST00000581189 TTC37Q6PGP7 1564 aa10.65□□□□□ -0.71
NDEL1-210ENST00000581189 PHLDB1Q86UU1 1377 aa10.65□□□□□ -0.71
NDEL1-210ENST00000581189 ARAP3Q8WWN8 1544 aa10.63□□□□□ -0.71
NDEL1-210ENST00000581189 NEO1Q92859 1461 aa10.63□□□□□ -0.71
NDEL1-210ENST00000581189 KDM6BO15054 1643 aa10.63□□□□□ -0.71
NDEL1-210ENST00000581189 KIF14Q15058 1648 aa10.63□□□□□ -0.71
NDEL1-210ENST00000581189 AKNAQ7Z591 1439 aa10.6□□□□□ -0.71
NDEL1-210ENST00000581189 MAP3K1Q13233 1512 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms