RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 NUP160Q12769 1436 aa14.83□□□□□ -0.03
CDK5RAP3-220ENST00000581160 KIAA0586Q9BVV6 1533 aa14.81□□□□□ -0.04
CDK5RAP3-220ENST00000581160 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
CDK5RAP3-220ENST00000581160 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
CDK5RAP3-220ENST00000581160 CTTNBP2Q8WZ74 1663 aa14.75□□□□□ -0.05
CDK5RAP3-220ENST00000581160 IQGAP2Q13576 1575 aa14.73□□□□□ -0.05
CDK5RAP3-220ENST00000581160 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
CDK5RAP3-220ENST00000581160 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-220ENST00000581160 UGGT2Q9NYU1 1516 aa14.69□□□□□ -0.06
CDK5RAP3-220ENST00000581160 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
CDK5RAP3-220ENST00000581160 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
CDK5RAP3-220ENST00000581160 CLIP1P30622 1438 aa14.66□□□□□ -0.06
CDK5RAP3-220ENST00000581160 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-220ENST00000581160 CARMIL2Q6F5E8 1435 aa14.64□□□□□ -0.07
CDK5RAP3-220ENST00000581160 DISP1Q96F81 1524 aa14.63□□□□□ -0.07
CDK5RAP3-220ENST00000581160 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
CDK5RAP3-220ENST00000581160 EFCAB5A4FU69 1503 aa14.62□□□□□ -0.07
CDK5RAP3-220ENST00000581160 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
CDK5RAP3-220ENST00000581160 SAMD9Q5K651 1589 aa14.61□□□□□ -0.07
CDK5RAP3-220ENST00000581160 KIAA0556O60303 1618 aa14.58□□□□□ -0.08
CDK5RAP3-220ENST00000581160 FHOD3Q2V2M9 1422 aa14.56□□□□□ -0.08
CDK5RAP3-220ENST00000581160 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
CDK5RAP3-220ENST00000581160 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
CDK5RAP3-220ENST00000581160 PTPRGP23470 1445 aa14.54□□□□□ -0.08
CDK5RAP3-220ENST00000581160 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
CDK5RAP3-220ENST00000581160 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
CDK5RAP3-220ENST00000581160 TTBK1Q5TCY1 1321 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-220ENST00000581160 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
CDK5RAP3-220ENST00000581160 VPS8Q8N3P4 1428 aa14.48□□□□□ -0.09
CDK5RAP3-220ENST00000581160 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
CDK5RAP3-220ENST00000581160 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
CDK5RAP3-220ENST00000581160 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
CDK5RAP3-220ENST00000581160 CASKIN1Q8WXD9 1431 aa14.44□□□□□ -0.1
CDK5RAP3-220ENST00000581160 UACAQ9BZF9 1416 aa14.44□□□□□ -0.1
CDK5RAP3-220ENST00000581160 CYB5RLQ6IPT4 315 aa14.43□□□□□ -0.1
CDK5RAP3-220ENST00000581160 PLB1Q6P1J6 1458 aa14.43□□□□□ -0.1
CDK5RAP3-220ENST00000581160 ABCA8O94911 1581 aa14.43□□□□□ -0.1
CDK5RAP3-220ENST00000581160 ATP1B4Q9UN42 357 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-220ENST00000581160 UHRF1BP1LA0JNW5 1464 aa14.4□□□□□ -0.1
CDK5RAP3-220ENST00000581160 RAPGEF6Q8TEU7 1601 aa14.4□□□□□ -0.1
CDK5RAP3-220ENST00000581160 FYCO1Q9BQS8 1478 aa14.39□□□□□ -0.11
CDK5RAP3-220ENST00000581160 ABCC2Q92887 1545 aa14.37□□□□□ -0.11
CDK5RAP3-220ENST00000581160 APLP2Q06481 763 aa14.37□□□□□ -0.11
CDK5RAP3-220ENST00000581160 PCF11O94913 1555 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-220ENST00000581160 NUP153P49790 1475 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-220ENST00000581160 HECW1Q76N89 1606 aa14.35□□□□□ -0.11
CDK5RAP3-220ENST00000581160 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDK5RAP3-220ENST00000581160 ATP10BO94823 1461 aa14.34□□□□□ -0.11
CDK5RAP3-220ENST00000581160 EPRSP07814 1512 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-220ENST00000581160 MAP3K1Q13233 1512 aa14.33□□□□□ -0.12
CDK5RAP3-220ENST00000581160 ARID3CA6NKF2 412 aa14.33□□□□□ -0.12
CDK5RAP3-220ENST00000581160 ADCY10Q96PN6 1610 aa14.33□□□□□ -0.12
CDK5RAP3-220ENST00000581160 CCDC18Q5T9S5 1454 aa14.32□□□□□ -0.12
CDK5RAP3-220ENST00000581160 KDM5BQ9UGL1 1544 aa14.32□□□□□ -0.12
CDK5RAP3-220ENST00000581160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-220ENST00000581160 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-220ENST00000581160 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-220ENST00000581160 PLEKHD1A6NEE1 506 aa14.3□□□□□ -0.12
CDK5RAP3-220ENST00000581160 LRRIQ1Q96JM4 1722 aa14.29□□□□□ -0.12
CDK5RAP3-220ENST00000581160 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-220ENST00000581160 TIAM1Q13009 1591 aa14.27□□□□□ -0.12
CDK5RAP3-220ENST00000581160 KANK4Q5T7N3 995 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-220ENST00000581160 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-220ENST00000581160 LRRC9Q6ZRR7 1453 aa14.24□□□□□ -0.13
CDK5RAP3-220ENST00000581160 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
CDK5RAP3-220ENST00000581160 MTUS2Q5JR59 1369 aa14.22□□□□□ -0.13
CDK5RAP3-220ENST00000581160 PPARGC1BQ86YN6 1023 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-220ENST00000581160 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-220ENST00000581160 ASXL2Q76L83 1435 aa14.21□□□□□ -0.13
CDK5RAP3-220ENST00000581160 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
CDK5RAP3-220ENST00000581160 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
CDK5RAP3-220ENST00000581160 MAPKBP1O60336 1514 aa14.19□□□□□ -0.14
CDK5RAP3-220ENST00000581160 WDR7Q9Y4E6 1490 aa14.18□□□□□ -0.14
CDK5RAP3-220ENST00000581160 EHBP1L1Q8N3D4 1523 aa14.17□□□□□ -0.14
CDK5RAP3-220ENST00000581160 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-220ENST00000581160 NCOA2Q15596 1464 aa14.12□□□□□ -0.15
CDK5RAP3-220ENST00000581160 ABCC10Q5T3U5 1492 aa14.11□□□□□ -0.15
CDK5RAP3-220ENST00000581160 KIF14Q15058 1648 aa14.1□□□□□ -0.15
CDK5RAP3-220ENST00000581160 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
CDK5RAP3-220ENST00000581160 FAM69CQ0P6D2 419 aa14.09□□□□□ -0.15
CDK5RAP3-220ENST00000581160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDK5RAP3-220ENST00000581160 GLI2P10070 1586 aa14.08□□□□□ -0.16
CDK5RAP3-220ENST00000581160 PHLDB1Q86UU1 1377 aa14.08□□□□□ -0.16
CDK5RAP3-220ENST00000581160 GPATCH8Q9UKJ3 1502 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-220ENST00000581160 ABCA9Q8IUA7 1624 aa14.06□□□□□ -0.16
CDK5RAP3-220ENST00000581160 CFDP1Q9UEE9 299 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-220ENST00000581160 PLCH2O75038 1416 aa14.05□□□□□ -0.16
CDK5RAP3-220ENST00000581160 MYOM3Q5VTT5 1437 aa14.05□□□□□ -0.16
CDK5RAP3-220ENST00000581160 CD109Q6YHK3 1445 aa14.04□□□□□ -0.16
CDK5RAP3-220ENST00000581160 TTC37Q6PGP7 1564 aa14.04□□□□□ -0.16
CDK5RAP3-220ENST00000581160 DIP2BQ9P265 1576 aa14.04□□□□□ -0.16
CDK5RAP3-220ENST00000581160 EFCAB2Q5VUJ9 269 aa14.03□□□□□ -0.16
CDK5RAP3-220ENST00000581160 MIA2Q96PC5 1412 aa14.03□□□□□ -0.16
CDK5RAP3-220ENST00000581160 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-220ENST00000581160 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
CDK5RAP3-220ENST00000581160 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
CDK5RAP3-220ENST00000581160 FGD6Q6ZV73 1430 aa14□□□□□ -0.17
CDK5RAP3-220ENST00000581160 MYO5CQ9NQX4 1742 aa14□□□□□ -0.17
CDK5RAP3-220ENST00000581160 MAP3K4Q9Y6R4 1608 aa14□□□□□ -0.17
CDK5RAP3-220ENST00000581160 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms