RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 ERCC6Q03468 1493 aa9.8□□□□□ -0.84
PPP4R1-217ENST00000580583 IFT140Q96RY7 1462 aa9.8□□□□□ -0.84
PPP4R1-217ENST00000580583 TDRD9Q8NDG6 1382 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-217ENST00000580583 PPARGC1BQ86YN6 1023 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-217ENST00000580583 RANGAP1P46060 587 aaPredicted RBP9.77□□□□□ -0.85
PPP4R1-217ENST00000580583 EIF4G3O43432 1585 aaKnown RBP9.75□□□□□ -0.85
PPP4R1-217ENST00000580583 GRIN2BQ13224 1484 aa9.75□□□□□ -0.85
PPP4R1-217ENST00000580583 PCF11O94913 1555 aaKnown RBP9.75□□□□□ -0.85
PPP4R1-217ENST00000580583 CFAP43Q8NDM7 1665 aa9.74□□□□□ -0.85
PPP4R1-217ENST00000580583 PIAS4Q8N2W9 510 aaPredicted RBP9.74□□□□□ -0.85
PPP4R1-217ENST00000580583 SAMD9Q5K651 1589 aa9.74□□□□□ -0.85
PPP4R1-217ENST00000580583 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
PPP4R1-217ENST00000580583 APLP2Q06481 763 aa9.73□□□□□ -0.85
PPP4R1-217ENST00000580583 MAP3K1Q13233 1512 aa9.72□□□□□ -0.85
PPP4R1-217ENST00000580583 TTBK1Q5TCY1 1321 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-217ENST00000580583 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-217ENST00000580583 TIAM1Q13009 1591 aa9.71□□□□□ -0.85
PPP4R1-217ENST00000580583 AQRO60306 1485 aaKnown RBP eCLIP9.71□□□□□ -0.867e-12■□□□□ 9.9
PPP4R1-217ENST00000580583 FYCO1Q9BQS8 1478 aa9.71□□□□□ -0.86
PPP4R1-217ENST00000580583 IQGAP2Q13576 1575 aa9.69□□□□□ -0.86
PPP4R1-217ENST00000580583 FHOD3Q2V2M9 1422 aa9.69□□□□□ -0.86
PPP4R1-217ENST00000580583 SNAPC4Q5SXM2 1469 aa9.68□□□□□ -0.86
PPP4R1-217ENST00000580583 MAGI1Q96QZ7 1491 aaPredicted RBP9.67□□□□□ -0.86
PPP4R1-217ENST00000580583 FMN1Q68DA7 1419 aa9.67□□□□□ -0.86
PPP4R1-217ENST00000580583 CASKIN1Q8WXD9 1431 aa9.66□□□□□ -0.86
PPP4R1-217ENST00000580583 ZEB1P37275 1124 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-217ENST00000580583 GRIN2AQ12879 1464 aa9.65□□□□□ -0.87
PPP4R1-217ENST00000580583 UGGT2Q9NYU1 1516 aa9.63□□□□□ -0.87
PPP4R1-217ENST00000580583 LRRC9Q6ZRR7 1453 aa9.63□□□□□ -0.87
PPP4R1-217ENST00000580583 RRBP1Q9P2E9 1410 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-217ENST00000580583 SYNJ2O15056 1496 aa9.62□□□□□ -0.87
PPP4R1-217ENST00000580583 HECW1Q76N89 1606 aa9.62□□□□□ -0.87
PPP4R1-217ENST00000580583 KIAA0586Q9BVV6 1533 aa9.61□□□□□ -0.87
PPP4R1-217ENST00000580583 KIAA0556O60303 1618 aa9.6□□□□□ -0.87
PPP4R1-217ENST00000580583 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-217ENST00000580583 CEP170Q5SW79 1584 aa9.58□□□□□ -0.88
PPP4R1-217ENST00000580583 EHBP1L1Q8N3D4 1523 aa9.58□□□□□ -0.88
PPP4R1-217ENST00000580583 P3H3Q8IVL6 736 aa9.58□□□□□ -0.88
PPP4R1-217ENST00000580583 LRRIQ1Q96JM4 1722 aa9.58□□□□□ -0.88
PPP4R1-217ENST00000580583 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
PPP4R1-217ENST00000580583 CCNB3Q8WWL7 1395 aa9.57□□□□□ -0.88
PPP4R1-217ENST00000580583 NUP160Q12769 1436 aa9.56□□□□□ -0.88
PPP4R1-217ENST00000580583 CACNB1Q02641 598 aaPredicted RBP9.55□□□□□ -0.88
PPP4R1-217ENST00000580583 DISP1Q96F81 1524 aa9.55□□□□□ -0.88
PPP4R1-217ENST00000580583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.54□□□□□ -0.88
PPP4R1-217ENST00000580583 CCER1Q8TC90 406 aaPredicted RBP9.54□□□□□ -0.88
PPP4R1-217ENST00000580583 SUPT6HQ7KZ85 1726 aaKnown RBP9.53□□□□□ -0.88
PPP4R1-217ENST00000580583 PHLDB1Q86UU1 1377 aa9.53□□□□□ -0.88
PPP4R1-217ENST00000580583 HNRNPUL2Q1KMD3 747 aaKnown RBP9.53□□□□□ -0.88
PPP4R1-217ENST00000580583 MTUS2Q5JR59 1369 aa9.51□□□□□ -0.89
PPP4R1-217ENST00000580583 RAPGEF6Q8TEU7 1601 aa9.51□□□□□ -0.89
PPP4R1-217ENST00000580583 EPRSP07814 1512 aaKnown RBP9.51□□□□□ -0.89
PPP4R1-217ENST00000580583 CHMP7Q8WUX9 453 aaPredicted RBP9.5□□□□□ -0.89
PPP4R1-217ENST00000580583 ATP1B4Q9UN42 357 aaPredicted RBP9.5□□□□□ -0.89
PPP4R1-217ENST00000580583 CHD1O14646 1710 aa9.5□□□□□ -0.89
PPP4R1-217ENST00000580583 MAGI3Q5TCQ9 1506 aa9.5□□□□□ -0.89
PPP4R1-217ENST00000580583 NCOA2Q15596 1464 aa9.49□□□□□ -0.89
PPP4R1-217ENST00000580583 ARHGEF11O15085 1522 aa9.49□□□□□ -0.89
PPP4R1-217ENST00000580583 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
PPP4R1-217ENST00000580583 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-217ENST00000580583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.48□□□□□ -0.89
PPP4R1-217ENST00000580583 CARMIL2Q6F5E8 1435 aa9.48□□□□□ -0.89
PPP4R1-217ENST00000580583 MYOM3Q5VTT5 1437 aa9.47□□□□□ -0.89
PPP4R1-217ENST00000580583 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-217ENST00000580583 SHROOM2Q13796 1616 aa9.45□□□□□ -0.9
PPP4R1-217ENST00000580583 FBLN2P98095 1184 aa9.44□□□□□ -0.9
PPP4R1-217ENST00000580583 PTPN23Q9H3S7 1636 aa9.43□□□□□ -0.9
PPP4R1-217ENST00000580583 ABCA8O94911 1581 aa9.43□□□□□ -0.9
PPP4R1-217ENST00000580583 TCOF1Q13428 1488 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-217ENST00000580583 ADCY10Q96PN6 1610 aa9.42□□□□□ -0.9
PPP4R1-217ENST00000580583 DHX57Q6P158 1386 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-217ENST00000580583 PLB1Q6P1J6 1458 aa9.41□□□□□ -0.9
PPP4R1-217ENST00000580583 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
PPP4R1-217ENST00000580583 FAM50AQ14320 339 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-217ENST00000580583 ITSN2Q9NZM3 1697 aa9.41□□□□□ -0.9
PPP4R1-217ENST00000580583 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
PPP4R1-217ENST00000580583 SETD5Q9C0A6 1442 aa9.39□□□□□ -0.91
PPP4R1-217ENST00000580583 RAB3GAP2Q9H2M9 1393 aa9.39□□□□□ -0.91
PPP4R1-217ENST00000580583 ITGAEP38570 1179 aa9.39□□□□□ -0.91
PPP4R1-217ENST00000580583 PLPPR3Q6T4P5 718 aa9.39□□□□□ -0.91
PPP4R1-217ENST00000580583 CLASP1Q7Z460 1538 aa9.39□□□□□ -0.91
PPP4R1-217ENST00000580583 TROQ12816 1431 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-217ENST00000580583 PRG4Q92954 1404 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-217ENST00000580583 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
PPP4R1-217ENST00000580583 GCC2Q8IWJ2 1684 aa9.38□□□□□ -0.91
PPP4R1-217ENST00000580583 KIF14Q15058 1648 aa9.37□□□□□ -0.91
PPP4R1-217ENST00000580583 HFM1A2PYH4 1435 aa9.37□□□□□ -0.91
PPP4R1-217ENST00000580583 AKNAQ7Z591 1439 aa9.37□□□□□ -0.91
PPP4R1-217ENST00000580583 MAPKBP1O60336 1514 aa9.36□□□□□ -0.91
PPP4R1-217ENST00000580583 CDK11AQ9UQ88 783 aaPredicted RBP9.35□□□□□ -0.91
PPP4R1-217ENST00000580583 DNMT1P26358 1616 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-217ENST00000580583 ARID3CA6NKF2 412 aa9.34□□□□□ -0.91
PPP4R1-217ENST00000580583 PTPRGP23470 1445 aa9.33□□□□□ -0.92
PPP4R1-217ENST00000580583 PTPRKQ15262 1439 aa9.33□□□□□ -0.92
PPP4R1-217ENST00000580583 ABCC2Q92887 1545 aa9.32□□□□□ -0.92
PPP4R1-217ENST00000580583 CAMSAP2Q08AD1 1489 aa9.32□□□□□ -0.92
PPP4R1-217ENST00000580583 ERCC6L2Q5T890 1561 aa9.32□□□□□ -0.92
PPP4R1-217ENST00000580583 CROCC2H7BZ55 1655 aa9.32□□□□□ -0.92
PPP4R1-217ENST00000580583 ATP10BO94823 1461 aa9.31□□□□□ -0.92
PPP4R1-217ENST00000580583 ADGBQ8N7X0 1667 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms