RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 IGF1RP08069 1367 aa42.69■■■■■ 4.42
CDC42EP4-205ENST00000580315 KIF27Q86VH2 1401 aa42.64■■■■■ 4.42
CDC42EP4-205ENST00000580315 KIF13AQ9H1H9 1805 aa42.6■■■■■ 4.41
CDC42EP4-205ENST00000580315 KIAA0586Q9BVV6 1533 aa42.59■■■■■ 4.41
CDC42EP4-205ENST00000580315 NPM1P06748 294 aaKnown RBP eCLIP42.55■■■■■ 4.4
CDC42EP4-205ENST00000580315 CUL7Q14999 1698 aa42.51■■■■■ 4.4
CDC42EP4-205ENST00000580315 FAM69CQ0P6D2 419 aa42.48■■■■■ 4.39
CDC42EP4-205ENST00000580315 ABCC10Q5T3U5 1492 aa42.47■■■■■ 4.39
CDC42EP4-205ENST00000580315 ADCY10Q96PN6 1610 aa42.45■■■■■ 4.39
CDC42EP4-205ENST00000580315 MAPKBP1O60336 1514 aa42.45■■■■■ 4.39
CDC42EP4-205ENST00000580315 CARMIL1Q5VZK9 1371 aa42.39■■■■■ 4.38
CDC42EP4-205ENST00000580315 DIP2BQ9P265 1576 aa42.31■■■■■ 4.36
CDC42EP4-205ENST00000580315 PTPRGP23470 1445 aa42.27■■■■■ 4.36
CDC42EP4-205ENST00000580315 TTBK1Q5TCY1 1321 aaPredicted RBP42.18■■■■■ 4.34
CDC42EP4-205ENST00000580315 CARMIL2Q6F5E8 1435 aa42.17■■■■■ 4.34
CDC42EP4-205ENST00000580315 TNIKQ9UKE5 1360 aa42.15■■■■■ 4.34
CDC42EP4-205ENST00000580315 IQGAP2Q13576 1575 aa42.1■■■■■ 4.33
CDC42EP4-205ENST00000580315 ABCC2Q92887 1545 aa42.05■■■■■ 4.32
CDC42EP4-205ENST00000580315 KDM6BO15054 1643 aa42■■■■■ 4.31
CDC42EP4-205ENST00000580315 TSPOAP1O95153 1857 aa41.98■■■■■ 4.31
CDC42EP4-205ENST00000580315 DISP1Q96F81 1524 aa41.97■■■■■ 4.31
CDC42EP4-205ENST00000580315 RAPGEF2Q9Y4G8 1499 aa41.95■■■■■ 4.31
CDC42EP4-205ENST00000580315 UHRF1BP1LA0JNW5 1464 aa41.94■■■■■ 4.3
CDC42EP4-205ENST00000580315 ASXL2Q76L83 1435 aa41.94■■■■■ 4.3
CDC42EP4-205ENST00000580315 UACAQ9BZF9 1416 aa41.92■■■■■ 4.3
CDC42EP4-205ENST00000580315 PLB1Q6P1J6 1458 aa41.91■■■■■ 4.3
CDC42EP4-205ENST00000580315 UGGT2Q9NYU1 1516 aa41.85■■■■■ 4.29
CDC42EP4-205ENST00000580315 GLI2P10070 1586 aa41.81■■■■■ 4.28
CDC42EP4-205ENST00000580315 KDM4FA0A1W2PPD8 638 aa41.78■■■■■ 4.28
CDC42EP4-205ENST00000580315 KDM5BQ9UGL1 1544 aa41.76■■■■■ 4.28
CDC42EP4-205ENST00000580315 KIAA0556O60303 1618 aa41.72■■■■■ 4.27
CDC42EP4-205ENST00000580315 PPRC1Q5VV67 1664 aaKnown RBP41.71■■■■■ 4.27
CDC42EP4-205ENST00000580315 EPRSP07814 1512 aaKnown RBP41.67■■■■■ 4.26
CDC42EP4-205ENST00000580315 ZCCHC11Q5TAX3 1644 aaKnown RBP41.62■■■■■ 4.25
CDC42EP4-205ENST00000580315 PRXQ9BXM0 1461 aa41.61■■■■■ 4.25
CDC42EP4-205ENST00000580315 EEA1Q15075 1411 aa41.59■■■■■ 4.25
CDC42EP4-205ENST00000580315 CSRNP3Q8WYN3 585 aa41.58■■■■■ 4.25
CDC42EP4-205ENST00000580315 CHIC1Q5VXU3 224 aa41.57■■■■■ 4.25
CDC42EP4-205ENST00000580315 MAP3K4Q9Y6R4 1608 aa41.55■■■■■ 4.24
CDC42EP4-205ENST00000580315 COL17A1Q9UMD9 1497 aaPredicted RBP41.53■■■■■ 4.24
CDC42EP4-205ENST00000580315 CTTNBP2Q8WZ74 1663 aa41.52■■■■■ 4.24
CDC42EP4-205ENST00000580315 GOLGA3Q08378 1498 aa41.49■■■■■ 4.23
CDC42EP4-205ENST00000580315 TEX14Q8IWB6 1497 aa41.48■■■■■ 4.23
CDC42EP4-205ENST00000580315 WDR7Q9Y4E6 1490 aa41.47■■■■■ 4.23
CDC42EP4-205ENST00000580315 ABCA8O94911 1581 aa41.38■■■■■ 4.22
CDC42EP4-205ENST00000580315 FAM9AQ8IZU1 332 aaPredicted RBP41.38■■■■■ 4.21
CDC42EP4-205ENST00000580315 ADGRL1O94910 1474 aa41.34■■■■■ 4.21
CDC42EP4-205ENST00000580315 KCNH8Q96L42 1107 aa41.3■■■■■ 4.2
CDC42EP4-205ENST00000580315 CD109Q6YHK3 1445 aa41.27■■■■■ 4.2
CDC42EP4-205ENST00000580315 MAGI3Q5TCQ9 1506 aa41.23■■■■■ 4.19
CDC42EP4-205ENST00000580315 CFAP43Q8NDM7 1665 aa41.18■■■■■ 4.18
CDC42EP4-205ENST00000580315 P3H3Q8IVL6 736 aa41.17■■■■■ 4.18
CDC42EP4-205ENST00000580315 ARID3CA6NKF2 412 aa41.1■■■■■ 4.17
CDC42EP4-205ENST00000580315 KIF21BO75037 1637 aa41.09■■■■■ 4.17
CDC42EP4-205ENST00000580315 ATP10BO94823 1461 aa41.08■■■■■ 4.17
CDC42EP4-205ENST00000580315 SAMD9Q5K651 1589 aa40.97■■■■■ 4.15
CDC42EP4-205ENST00000580315 ARAP3Q8WWN8 1544 aa40.93■■■■■ 4.14
CDC42EP4-205ENST00000580315 RAPGEF6Q8TEU7 1601 aa40.86■■■■■ 4.13
CDC42EP4-205ENST00000580315 UBTFP17480 764 aaKnown RBP40.86■■■■■ 4.13
CDC42EP4-205ENST00000580315 ABCA9Q8IUA7 1624 aa40.85■■■■■ 4.13
CDC42EP4-205ENST00000580315 RANGAP1P46060 587 aaPredicted RBP40.85■■■■■ 4.13
CDC42EP4-205ENST00000580315 EHMT2Q96KQ7 1210 aa40.85■■■■■ 4.13
CDC42EP4-205ENST00000580315 PHLDB1Q86UU1 1377 aa40.83■■■■■ 4.13
CDC42EP4-205ENST00000580315 HECW2Q9P2P5 1572 aa40.82■■■■■ 4.13
CDC42EP4-205ENST00000580315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.81■■■■■ 4.12
CDC42EP4-205ENST00000580315 HNRNPUL2Q1KMD3 747 aaKnown RBP40.81■■■■■ 4.12
CDC42EP4-205ENST00000580315 NUP153P49790 1475 aaKnown RBP40.77■■■■■ 4.12
CDC42EP4-205ENST00000580315 ILDR1Q86SU0 546 aaPredicted RBP40.74■■■■■ 4.11
CDC42EP4-205ENST00000580315 FHOD3Q2V2M9 1422 aa40.74■■■■■ 4.11
CDC42EP4-205ENST00000580315 RAPGEF3O95398 923 aa40.71■■■■■ 4.11
CDC42EP4-205ENST00000580315 NEO1Q92859 1461 aa40.7■■■■■ 4.11
CDC42EP4-205ENST00000580315 EFCAB5A4FU69 1503 aa40.69■■■■■ 4.1
CDC42EP4-205ENST00000580315 PLEKHD1A6NEE1 506 aa40.6■■■■■ 4.09
CDC42EP4-205ENST00000580315 FRMPD1Q5SYB0 1578 aa40.53■■■■■ 4.08
CDC42EP4-205ENST00000580315 ADAMTSL3P82987 1691 aa40.49■■■■■ 4.07
CDC42EP4-205ENST00000580315 PTPRMP28827 1452 aa40.47■■■■■ 4.07
CDC42EP4-205ENST00000580315 DENND4BO75064 1496 aaPredicted RBP40.43■■■■■ 4.06
CDC42EP4-205ENST00000580315 ARID4BQ4LE39 1312 aaPredicted RBP40.42■■■■■ 4.06
CDC42EP4-205ENST00000580315 AKNAQ7Z591 1439 aa40.42■■■■■ 4.06
CDC42EP4-205ENST00000580315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.42■■■■■ 4.06
CDC42EP4-205ENST00000580315 ARHGAP35Q9NRY4 1499 aa40.42■■■■■ 4.06
CDC42EP4-205ENST00000580315 FANCAO15360 1455 aa40.41■■■■■ 4.06
CDC42EP4-205ENST00000580315 BCORL1Q5H9F3 1711 aa40.36■■■■■ 4.05
CDC42EP4-205ENST00000580315 FMN1Q68DA7 1419 aa40.36■■■■■ 4.05
CDC42EP4-205ENST00000580315 TTC37Q6PGP7 1564 aa40.34■■■■■ 4.05
CDC42EP4-205ENST00000580315 CDK13Q14004 1512 aaKnown RBP40.33■■■■■ 4.05
CDC42EP4-205ENST00000580315 RICTORQ6R327 1708 aa40.33■■■■■ 4.05
CDC42EP4-205ENST00000580315 ARHGEF40Q8TER5 1519 aa40.32■■■■■ 4.05
CDC42EP4-205ENST00000580315 CFAP74Q9C0B2 1584 aa40.32■■■■■ 4.05
CDC42EP4-205ENST00000580315 MADDQ8WXG6 1647 aa40.28■■■■■ 4.04
CDC42EP4-205ENST00000580315 ZMYM4Q5VZL5 1548 aa40.21■■■■■ 4.03
CDC42EP4-205ENST00000580315 PLCH2O75038 1416 aa40.2■■■■■ 4.03
CDC42EP4-205ENST00000580315 ATP1B4Q9UN42 357 aaPredicted RBP40.2■■■■■ 4.03
CDC42EP4-205ENST00000580315 YEATS2Q9ULM3 1422 aa40.17■■■■■ 4.02
CDC42EP4-205ENST00000580315 ZFYVE16Q7Z3T8 1539 aa40.16■■■■■ 4.02
CDC42EP4-205ENST00000580315 CLIP1P30622 1438 aa40.16■■■■■ 4.02
CDC42EP4-205ENST00000580315 HECW1Q76N89 1606 aa40.15■■■■■ 4.02
CDC42EP4-205ENST00000580315 MAGI2Q86UL8 1455 aa40.14■■■■■ 4.02
CDC42EP4-205ENST00000580315 SCAPERQ9BY12 1400 aa40.14■■■■■ 4.02
CDC42EP4-205ENST00000580315 POGZQ7Z3K3 1410 aa40.13■■■■■ 4.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms