RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 RAB3GAP2Q9H2M9 1393 aa14.15□□□□□ -0.14
LINC00909-202ENST00000580048 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
LINC00909-202ENST00000580048 KIF21BO75037 1637 aa14.14□□□□□ -0.15
LINC00909-202ENST00000580048 NACADO15069 1562 aa14.13□□□□□ -0.15
LINC00909-202ENST00000580048 CCNB3Q8WWL7 1395 aa14.13□□□□□ -0.15
LINC00909-202ENST00000580048 ANP32AP39687 249 aaKnown RBP14.13□□□□□ -0.15
LINC00909-202ENST00000580048 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
LINC00909-202ENST00000580048 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
LINC00909-202ENST00000580048 EIF5BO60841 1220 aaKnown RBP14.1□□□□□ -0.15
LINC00909-202ENST00000580048 TOP2AP11388 1531 aaKnown RBP14.09□□□□□ -0.15
LINC00909-202ENST00000580048 FAM50AQ14320 339 aaKnown RBP14.08□□□□□ -0.16
LINC00909-202ENST00000580048 SMARCA2P51531 1590 aa14.08□□□□□ -0.16
LINC00909-202ENST00000580048 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
LINC00909-202ENST00000580048 NPM2Q86SE8 214 aaKnown RBP14.05□□□□□ -0.16
LINC00909-202ENST00000580048 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
LINC00909-202ENST00000580048 IPO9Q96P70 1041 aaKnown RBP14.05□□□□□ -0.16
LINC00909-202ENST00000580048 MAPKBP1O60336 1514 aa14.04□□□□□ -0.16
LINC00909-202ENST00000580048 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
LINC00909-202ENST00000580048 BAZ1BQ9UIG0 1483 aaKnown RBP14.02□□□□□ -0.16
LINC00909-202ENST00000580048 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
LINC00909-202ENST00000580048 SETD5Q9C0A6 1442 aa13.99□□□□□ -0.17
LINC00909-202ENST00000580048 NEFMP07197 916 aa13.99□□□□□ -0.17
LINC00909-202ENST00000580048 CNGB1Q14028 1251 aaPredicted RBP13.99□□□□□ -0.17
LINC00909-202ENST00000580048 TONSLQ96HA7 1378 aa13.98□□□□□ -0.17
LINC00909-202ENST00000580048 CUX2O14529 1486 aa13.98□□□□□ -0.17
LINC00909-202ENST00000580048 CCDC184Q52MB2 194 aa13.97□□□□□ -0.17
LINC00909-202ENST00000580048 ATP1B4Q9UN42 357 aaPredicted RBP13.96□□□□□ -0.17
LINC00909-202ENST00000580048 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
LINC00909-202ENST00000580048 SENP3-EIF4A1A0A087X0R7 540 aa13.96□□□□□ -0.18
LINC00909-202ENST00000580048 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
LINC00909-202ENST00000580048 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
LINC00909-202ENST00000580048 TIMELESSQ9UNS1 1208 aa13.93□□□□□ -0.18
LINC00909-202ENST00000580048 BRPF3Q9ULD4 1205 aa13.92□□□□□ -0.18
LINC00909-202ENST00000580048 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
LINC00909-202ENST00000580048 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
LINC00909-202ENST00000580048 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
LINC00909-202ENST00000580048 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
LINC00909-202ENST00000580048 AKNAQ7Z591 1439 aa13.83□□□□□ -0.2
LINC00909-202ENST00000580048 PHLDB1Q86UU1 1377 aa13.8□□□□□ -0.2
LINC00909-202ENST00000580048 PRKRIP1Q9H875 184 aaPredicted RBP13.8□□□□□ -0.2
LINC00909-202ENST00000580048 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
LINC00909-202ENST00000580048 PPM1GO15355 546 aaPredicted RBP13.79□□□□□ -0.2
LINC00909-202ENST00000580048 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
LINC00909-202ENST00000580048 POLR3GLQ9BT43 218 aa13.78□□□□□ -0.2
LINC00909-202ENST00000580048 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
LINC00909-202ENST00000580048 GSE1Q14687 1217 aa13.77□□□□□ -0.21
LINC00909-202ENST00000580048 C11orf95C9JLR9 678 aaPredicted RBP13.76□□□□□ -0.21
LINC00909-202ENST00000580048 WASHC2CQ9Y4E1 1318 aa13.75□□□□□ -0.21
LINC00909-202ENST00000580048 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
LINC00909-202ENST00000580048 ARHGAP35Q9NRY4 1499 aa13.74□□□□□ -0.21
LINC00909-202ENST00000580048 PDE4AP27815 886 aa13.74□□□□□ -0.21
LINC00909-202ENST00000580048 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC00909-202ENST00000580048 PKNOX2Q96KN3 472 aa13.74□□□□□ -0.21
LINC00909-202ENST00000580048 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
LINC00909-202ENST00000580048 DAXXQ9UER7 740 aaPredicted RBP13.73□□□□□ -0.21
LINC00909-202ENST00000580048 SLC4A3P48751 1232 aa13.72□□□□□ -0.21
LINC00909-202ENST00000580048 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
LINC00909-202ENST00000580048 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
LINC00909-202ENST00000580048 ERICH3Q5RHP9 1530 aa13.7□□□□□ -0.22
LINC00909-202ENST00000580048 FHAD1B1AJZ9 1412 aa13.7□□□□□ -0.22
LINC00909-202ENST00000580048 NFKBIBQ15653 356 aa13.69□□□□□ -0.22
LINC00909-202ENST00000580048 TCERG1O14776 1098 aaKnown RBP13.68□□□□□ -0.22
LINC00909-202ENST00000580048 EXOC6Q8TAG9 804 aa13.67□□□□□ -0.22
LINC00909-202ENST00000580048 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
LINC00909-202ENST00000580048 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
LINC00909-202ENST00000580048 RSPH6AQ9H0K4 717 aa13.66□□□□□ -0.22
LINC00909-202ENST00000580048 SKAP1Q86WV1 359 aa13.65□□□□□ -0.22
LINC00909-202ENST00000580048 BACH2Q9BYV9 841 aa13.65□□□□□ -0.22
LINC00909-202ENST00000580048 TIAM1Q13009 1591 aa13.65□□□□□ -0.23
LINC00909-202ENST00000580048 KIF27Q86VH2 1401 aa13.63□□□□□ -0.23
LINC00909-202ENST00000580048 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
LINC00909-202ENST00000580048 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
LINC00909-202ENST00000580048 CCDC7Q96M83 1385 aa13.63□□□□□ -0.23
LINC00909-202ENST00000580048 GLIPR1L2Q4G1C9 344 aa13.61□□□□□ -0.23
LINC00909-202ENST00000580048 VSIG10Q8N0Z9 540 aa13.6□□□□□ -0.23
LINC00909-202ENST00000580048 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
LINC00909-202ENST00000580048 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
LINC00909-202ENST00000580048 TMC1Q8TDI8 760 aa13.59□□□□□ -0.23
LINC00909-202ENST00000580048 RNF123Q5XPI4 1314 aa13.59□□□□□ -0.23
LINC00909-202ENST00000580048 FOXD1Q16676 465 aa13.59□□□□□ -0.23
LINC00909-202ENST00000580048 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
LINC00909-202ENST00000580048 UACAQ9BZF9 1416 aa13.59□□□□□ -0.23
LINC00909-202ENST00000580048 ARXQ96QS3 562 aa13.59□□□□□ -0.23
LINC00909-202ENST00000580048 TOP2BQ02880 1626 aa13.59□□□□□ -0.23
LINC00909-202ENST00000580048 RRP1P56182 461 aaKnown RBP13.58□□□□□ -0.24
LINC00909-202ENST00000580048 FRAT2O75474 233 aaPredicted RBP13.58□□□□□ -0.24
LINC00909-202ENST00000580048 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.24
LINC00909-202ENST00000580048 FAM43AQ8N2R8 423 aa13.57□□□□□ -0.24
LINC00909-202ENST00000580048 NCAPD3P42695 1498 aa13.56□□□□□ -0.24
LINC00909-202ENST00000580048 DCAF11Q8TEB1 546 aa13.56□□□□□ -0.24
LINC00909-202ENST00000580048 MS4A1P11836 297 aa13.56□□□□□ -0.24
LINC00909-202ENST00000580048 NCOA2Q15596 1464 aa13.56□□□□□ -0.24
LINC00909-202ENST00000580048 PEG3Q9GZU2 1588 aa13.55□□□□□ -0.24
LINC00909-202ENST00000580048 RCAN3Q9UKA8 241 aa13.55□□□□□ -0.24
LINC00909-202ENST00000580048 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00909-202ENST00000580048 ZNF326Q5BKZ1 582 aaKnown RBP13.54□□□□□ -0.24
LINC00909-202ENST00000580048 PLIN1O60240 522 aa13.53□□□□□ -0.24
LINC00909-202ENST00000580048 ZMYND15Q9H091 742 aa13.53□□□□□ -0.24
LINC00909-202ENST00000580048 NCOA1Q15788 1441 aa13.53□□□□□ -0.24
LINC00909-202ENST00000580048 NAP1L5Q96NT1 182 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms