RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 RIMBP3Q9UFD9 1639 aa37.76■■■■□ 3.63
NDEL1-207ENST00000580012 ARHGEF11O15085 1522 aa37.64■■■■□ 3.62
NDEL1-207ENST00000580012 KIAA0586Q9BVV6 1533 aa37.64■■■■□ 3.62
NDEL1-207ENST00000580012 JPH4Q96JJ6 628 aa37.58■■■■□ 3.61
NDEL1-207ENST00000580012 KIF21BO75037 1637 aa37.45■■■■□ 3.59
NDEL1-207ENST00000580012 SHROOM2Q13796 1616 aa37.45■■■■□ 3.59
NDEL1-207ENST00000580012 PRG4Q92954 1404 aaPredicted RBP37.38■■■■□ 3.57
NDEL1-207ENST00000580012 CYB5RLQ6IPT4 315 aa37.38■■■■□ 3.57
NDEL1-207ENST00000580012 IQGAP2Q13576 1575 aa37.35■■■■□ 3.57
NDEL1-207ENST00000580012 GOLGA3Q08378 1498 aa37.32■■■■□ 3.56
NDEL1-207ENST00000580012 ERCC6L2Q5T890 1561 aa37.29■■■■□ 3.56
NDEL1-207ENST00000580012 ARAP1Q96P48 1450 aa37.28■■■■□ 3.56
NDEL1-207ENST00000580012 UGGT2Q9NYU1 1516 aa37.26■■■■□ 3.56
NDEL1-207ENST00000580012 UBTFP17480 764 aaKnown RBP37.24■■■■□ 3.55
NDEL1-207ENST00000580012 EHMT2Q96KQ7 1210 aa37.22■■■■□ 3.55
NDEL1-207ENST00000580012 CTTNBP2Q8WZ74 1663 aa37.18■■■■□ 3.54
NDEL1-207ENST00000580012 CARMIL2Q6F5E8 1435 aa37.18■■■■□ 3.54
NDEL1-207ENST00000580012 DISP1Q96F81 1524 aa37.17■■■■□ 3.54
NDEL1-207ENST00000580012 TNIKQ9UKE5 1360 aa37.08■■■■□ 3.53
NDEL1-207ENST00000580012 PTPRGP23470 1445 aa37.02■■■■□ 3.52
NDEL1-207ENST00000580012 KIAA0556O60303 1618 aa36.99■■■■□ 3.51
NDEL1-207ENST00000580012 LOC105371045A0A1W2PR82 267 aa36.97■■■■□ 3.51
NDEL1-207ENST00000580012 TRHP20396 242 aaPredicted RBP36.96■■■■□ 3.51
NDEL1-207ENST00000580012 RANGAP1P46060 587 aaPredicted RBP36.94■■■■□ 3.5
NDEL1-207ENST00000580012 P3H3Q8IVL6 736 aa36.92■■■■□ 3.5
NDEL1-207ENST00000580012 SAMD9Q5K651 1589 aa36.91■■■■□ 3.5
NDEL1-207ENST00000580012 TTBK1Q5TCY1 1321 aaPredicted RBP36.85■■■■□ 3.49
NDEL1-207ENST00000580012 EFCAB5A4FU69 1503 aa36.83■■■■□ 3.49
NDEL1-207ENST00000580012 ARHGAP35Q9NRY4 1499 aa36.79■■■■□ 3.48
NDEL1-207ENST00000580012 UACAQ9BZF9 1416 aa36.77■■■■□ 3.48
NDEL1-207ENST00000580012 FHOD3Q2V2M9 1422 aa36.76■■■■□ 3.47
NDEL1-207ENST00000580012 UHRF1BP1LA0JNW5 1464 aa36.73■■■■□ 3.47
NDEL1-207ENST00000580012 CLIP1P30622 1438 aa36.68■■■■□ 3.46
NDEL1-207ENST00000580012 PLB1Q6P1J6 1458 aa36.68■■■■□ 3.46
NDEL1-207ENST00000580012 ADCY10Q96PN6 1610 aa36.66■■■■□ 3.46
NDEL1-207ENST00000580012 ABCA8O94911 1581 aa36.63■■■■□ 3.45
NDEL1-207ENST00000580012 ABCC2Q92887 1545 aa36.63■■■■□ 3.45
NDEL1-207ENST00000580012 NPM1P06748 294 aaKnown RBP eCLIP36.61■■■■□ 3.45
NDEL1-207ENST00000580012 CEP162Q5TB80 1403 aa36.6■■■■□ 3.45
NDEL1-207ENST00000580012 FMN1Q68DA7 1419 aa36.55■■■■□ 3.44
NDEL1-207ENST00000580012 KDM5BQ9UGL1 1544 aa36.54■■■■□ 3.44
NDEL1-207ENST00000580012 RAPGEF6Q8TEU7 1601 aa36.42■■■■□ 3.42
NDEL1-207ENST00000580012 NUP153P49790 1475 aaKnown RBP36.42■■■■□ 3.42
NDEL1-207ENST00000580012 ATP10BO94823 1461 aa36.41■■■■□ 3.42
NDEL1-207ENST00000580012 MAPKBP1O60336 1514 aa36.4■■■■□ 3.42
NDEL1-207ENST00000580012 CASKIN1Q8WXD9 1431 aa36.34■■■■□ 3.41
NDEL1-207ENST00000580012 ARID3CA6NKF2 412 aa36.33■■■■□ 3.41
NDEL1-207ENST00000580012 ASXL2Q76L83 1435 aa36.33■■■■□ 3.41
NDEL1-207ENST00000580012 ZCCHC11Q5TAX3 1644 aaKnown RBP36.3■■■■□ 3.4
NDEL1-207ENST00000580012 ATP1B4Q9UN42 357 aaPredicted RBP36.26■■■■□ 3.4
NDEL1-207ENST00000580012 ABCC10Q5T3U5 1492 aa36.24■■■■□ 3.39
NDEL1-207ENST00000580012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.21■■■■□ 3.39
NDEL1-207ENST00000580012 EPRSP07814 1512 aaKnown RBP36.21■■■■□ 3.39
NDEL1-207ENST00000580012 HNRNPUL2Q1KMD3 747 aaKnown RBP36.21■■■■□ 3.39
NDEL1-207ENST00000580012 FYCO1Q9BQS8 1478 aa36.19■■■■□ 3.38
NDEL1-207ENST00000580012 HECW1Q76N89 1606 aa36.19■■■■□ 3.38
NDEL1-207ENST00000580012 WDR7Q9Y4E6 1490 aa36.18■■■■□ 3.38
NDEL1-207ENST00000580012 FAM69CQ0P6D2 419 aa36.17■■■■□ 3.38
NDEL1-207ENST00000580012 PCF11O94913 1555 aaKnown RBP36.17■■■■□ 3.38
NDEL1-207ENST00000580012 VPS8Q8N3P4 1428 aa36.17■■■■□ 3.38
NDEL1-207ENST00000580012 PLEKHD1A6NEE1 506 aa36.15■■■■□ 3.38
NDEL1-207ENST00000580012 CDK13Q14004 1512 aaKnown RBP36.13■■■■□ 3.37
NDEL1-207ENST00000580012 KCNH8Q96L42 1107 aa36.08■■■■□ 3.37
NDEL1-207ENST00000580012 CDK11AQ9UQ88 783 aaPredicted RBP36.08■■■■□ 3.37
NDEL1-207ENST00000580012 DIP2BQ9P265 1576 aa36.07■■■■□ 3.37
NDEL1-207ENST00000580012 CCDC18Q5T9S5 1454 aa36.07■■■■□ 3.37
NDEL1-207ENST00000580012 GLI2P10070 1586 aa36.04■■■■□ 3.36
NDEL1-207ENST00000580012 KIF13AQ9H1H9 1805 aa35.99■■■■□ 3.35
NDEL1-207ENST00000580012 LRRIQ1Q96JM4 1722 aa35.97■■■■□ 3.35
NDEL1-207ENST00000580012 TROQ12816 1431 aaPredicted RBP35.94■■■■□ 3.34
NDEL1-207ENST00000580012 AEBP2Q6ZN18 517 aaPredicted RBP35.88■■■■□ 3.33
NDEL1-207ENST00000580012 MAGI3Q5TCQ9 1506 aa35.86■■■■□ 3.33
NDEL1-207ENST00000580012 CD109Q6YHK3 1445 aa35.84■■■■□ 3.33
NDEL1-207ENST00000580012 MAP3K1Q13233 1512 aa35.83■■■■□ 3.33
NDEL1-207ENST00000580012 MAP3K4Q9Y6R4 1608 aa35.79■■■■□ 3.32
NDEL1-207ENST00000580012 ABCA9Q8IUA7 1624 aa35.79■■■■□ 3.32
NDEL1-207ENST00000580012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.77■■■■□ 3.32
NDEL1-207ENST00000580012 MTUS2Q5JR59 1369 aa35.76■■■■□ 3.32
NDEL1-207ENST00000580012 TIAM1Q13009 1591 aa35.75■■■■□ 3.31
NDEL1-207ENST00000580012 CFAP43Q8NDM7 1665 aa35.72■■■■□ 3.31
NDEL1-207ENST00000580012 APLP2Q06481 763 aa35.72■■■■□ 3.31
NDEL1-207ENST00000580012 KANK4Q5T7N3 995 aaPredicted RBP35.72■■■■□ 3.31
NDEL1-207ENST00000580012 KIF14Q15058 1648 aa35.68■■■■□ 3.3
NDEL1-207ENST00000580012 LRRC9Q6ZRR7 1453 aa35.67■■■■□ 3.3
NDEL1-207ENST00000580012 PLCH2O75038 1416 aa35.66■■■■□ 3.3
NDEL1-207ENST00000580012 PPRC1Q5VV67 1664 aaKnown RBP35.66■■■■□ 3.3
NDEL1-207ENST00000580012 TEX14Q8IWB6 1497 aa35.66■■■■□ 3.3
NDEL1-207ENST00000580012 TTC37Q6PGP7 1564 aa35.64■■■■□ 3.3
NDEL1-207ENST00000580012 EHBP1L1Q8N3D4 1523 aa35.64■■■■□ 3.3
NDEL1-207ENST00000580012 PHLDB1Q86UU1 1377 aa35.59■■■■□ 3.29
NDEL1-207ENST00000580012 TSPOAP1O95153 1857 aa35.58■■■■□ 3.29
NDEL1-207ENST00000580012 ARAP3Q8WWN8 1544 aa35.55■■■■□ 3.28
NDEL1-207ENST00000580012 EFCAB2Q5VUJ9 269 aa35.54■■■■□ 3.28
NDEL1-207ENST00000580012 NEO1Q92859 1461 aa35.54■■■■□ 3.28
NDEL1-207ENST00000580012 GPATCH8Q9UKJ3 1502 aaKnown RBP35.53■■■■□ 3.28
NDEL1-207ENST00000580012 NCOA2Q15596 1464 aa35.51■■■■□ 3.28
NDEL1-207ENST00000580012 CCNB3Q8WWL7 1395 aa35.51■■■■□ 3.27
NDEL1-207ENST00000580012 FANCAO15360 1455 aa35.49■■■■□ 3.27
NDEL1-207ENST00000580012 COL17A1Q9UMD9 1497 aaPredicted RBP35.49■■■■□ 3.27
NDEL1-207ENST00000580012 KDM6BO15054 1643 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms