RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 KIAA0586Q9BVV6 1533 aa40.37■■■■■ 4.05
LIMD2-207ENST00000579329 ERCC6L2Q5T890 1561 aa40.37■■■■■ 4.05
LIMD2-207ENST00000579329 RAPGEF2Q9Y4G8 1499 aa40.34■■■■■ 4.05
LIMD2-207ENST00000579329 JPH4Q96JJ6 628 aa40.34■■■■■ 4.05
LIMD2-207ENST00000579329 PRG4Q92954 1404 aaPredicted RBP40.3■■■■■ 4.04
LIMD2-207ENST00000579329 CHIC1Q5VXU3 224 aa40.2■■■■■ 4.03
LIMD2-207ENST00000579329 AEBP2Q6ZN18 517 aaPredicted RBP40.18■■■■■ 4.02
LIMD2-207ENST00000579329 PRXQ9BXM0 1461 aa40.16■■■■■ 4.02
LIMD2-207ENST00000579329 EEA1Q15075 1411 aa40.16■■■■■ 4.02
LIMD2-207ENST00000579329 IQGAP2Q13576 1575 aa40.14■■■■■ 4.02
LIMD2-207ENST00000579329 CSRNP3Q8WYN3 585 aa40.08■■■■■ 4.01
LIMD2-207ENST00000579329 CTTNBP2Q8WZ74 1663 aa39.98■■■■□ 3.99
LIMD2-207ENST00000579329 CARMIL2Q6F5E8 1435 aa39.97■■■■□ 3.99
LIMD2-207ENST00000579329 KIF13AQ9H1H9 1805 aa39.93■■■■□ 3.98
LIMD2-207ENST00000579329 UGGT2Q9NYU1 1516 aa39.92■■■■□ 3.98
LIMD2-207ENST00000579329 FAM9AQ8IZU1 332 aaPredicted RBP39.9■■■■□ 3.98
LIMD2-207ENST00000579329 DISP1Q96F81 1524 aa39.85■■■■□ 3.97
LIMD2-207ENST00000579329 TNIKQ9UKE5 1360 aa39.84■■■■□ 3.97
LIMD2-207ENST00000579329 PTPRGP23470 1445 aa39.81■■■■□ 3.96
LIMD2-207ENST00000579329 KIAA0556O60303 1618 aa39.76■■■■□ 3.96
LIMD2-207ENST00000579329 KIF21BO75037 1637 aa39.74■■■■□ 3.95
LIMD2-207ENST00000579329 GOLGA3Q08378 1498 aa39.7■■■■□ 3.95
LIMD2-207ENST00000579329 ADCY10Q96PN6 1610 aa39.7■■■■□ 3.95
LIMD2-207ENST00000579329 TTBK1Q5TCY1 1321 aaPredicted RBP39.69■■■■□ 3.94
LIMD2-207ENST00000579329 NPM1P06748 294 aaKnown RBP eCLIP39.62■■■■□ 3.93
LIMD2-207ENST00000579329 UACAQ9BZF9 1416 aa39.55■■■■□ 3.92
LIMD2-207ENST00000579329 UHRF1BP1LA0JNW5 1464 aa39.53■■■■□ 3.92
LIMD2-207ENST00000579329 ABCC10Q5T3U5 1492 aa39.52■■■■□ 3.92
LIMD2-207ENST00000579329 MAPKBP1O60336 1514 aa39.5■■■■□ 3.91
LIMD2-207ENST00000579329 FAM69CQ0P6D2 419 aa39.5■■■■□ 3.91
LIMD2-207ENST00000579329 ABCC2Q92887 1545 aa39.49■■■■□ 3.91
LIMD2-207ENST00000579329 DIP2BQ9P265 1576 aa39.47■■■■□ 3.91
LIMD2-207ENST00000579329 SAMD9Q5K651 1589 aa39.45■■■■□ 3.91
LIMD2-207ENST00000579329 UBTFP17480 764 aaKnown RBP39.37■■■■□ 3.89
LIMD2-207ENST00000579329 EHMT2Q96KQ7 1210 aa39.37■■■■□ 3.89
LIMD2-207ENST00000579329 P3H3Q8IVL6 736 aa39.36■■■■□ 3.89
LIMD2-207ENST00000579329 PLB1Q6P1J6 1458 aa39.36■■■■□ 3.89
LIMD2-207ENST00000579329 TSPOAP1O95153 1857 aa39.34■■■■□ 3.89
LIMD2-207ENST00000579329 KDM5BQ9UGL1 1544 aa39.33■■■■□ 3.89
LIMD2-207ENST00000579329 ABCA8O94911 1581 aa39.33■■■■□ 3.89
LIMD2-207ENST00000579329 RANGAP1P46060 587 aaPredicted RBP39.32■■■■□ 3.89
LIMD2-207ENST00000579329 EFCAB5A4FU69 1503 aa39.28■■■■□ 3.88
LIMD2-207ENST00000579329 KDM6BO15054 1643 aa39.25■■■■□ 3.87
LIMD2-207ENST00000579329 ZCCHC11Q5TAX3 1644 aaKnown RBP39.25■■■■□ 3.87
LIMD2-207ENST00000579329 ASXL2Q76L83 1435 aa39.23■■■■□ 3.87
LIMD2-207ENST00000579329 FHOD3Q2V2M9 1422 aa39.21■■■■□ 3.87
LIMD2-207ENST00000579329 RAPGEF6Q8TEU7 1601 aa39.11■■■■□ 3.85
LIMD2-207ENST00000579329 KDM4FA0A1W2PPD8 638 aa39.04■■■■□ 3.84
LIMD2-207ENST00000579329 GLI2P10070 1586 aa39.04■■■■□ 3.84
LIMD2-207ENST00000579329 ARHGAP35Q9NRY4 1499 aa39.03■■■■□ 3.84
LIMD2-207ENST00000579329 WDR7Q9Y4E6 1490 aa39.03■■■■□ 3.84
LIMD2-207ENST00000579329 EPRSP07814 1512 aaKnown RBP39■■■■□ 3.83
LIMD2-207ENST00000579329 ATP10BO94823 1461 aa38.98■■■■□ 3.83
LIMD2-207ENST00000579329 ARID3CA6NKF2 412 aa38.96■■■■□ 3.83
LIMD2-207ENST00000579329 PPRC1Q5VV67 1664 aaKnown RBP38.95■■■■□ 3.83
LIMD2-207ENST00000579329 NUP153P49790 1475 aaKnown RBP38.94■■■■□ 3.82
LIMD2-207ENST00000579329 FMN1Q68DA7 1419 aa38.9■■■■□ 3.82
LIMD2-207ENST00000579329 MAP3K4Q9Y6R4 1608 aa38.84■■■■□ 3.81
LIMD2-207ENST00000579329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.82■■■■□ 3.8
LIMD2-207ENST00000579329 HNRNPUL2Q1KMD3 747 aaKnown RBP38.82■■■■□ 3.8
LIMD2-207ENST00000579329 KCNH8Q96L42 1107 aa38.79■■■■□ 3.8
LIMD2-207ENST00000579329 CLIP1P30622 1438 aa38.77■■■■□ 3.8
LIMD2-207ENST00000579329 HECW1Q76N89 1606 aa38.75■■■■□ 3.79
LIMD2-207ENST00000579329 CFAP43Q8NDM7 1665 aa38.73■■■■□ 3.79
LIMD2-207ENST00000579329 TEX14Q8IWB6 1497 aa38.69■■■■□ 3.78
LIMD2-207ENST00000579329 CD109Q6YHK3 1445 aa38.67■■■■□ 3.78
LIMD2-207ENST00000579329 ATP1B4Q9UN42 357 aaPredicted RBP38.66■■■■□ 3.78
LIMD2-207ENST00000579329 CDK13Q14004 1512 aaKnown RBP38.66■■■■□ 3.78
LIMD2-207ENST00000579329 PLEKHD1A6NEE1 506 aa38.65■■■■□ 3.78
LIMD2-207ENST00000579329 ADGRL1O94910 1474 aa38.64■■■■□ 3.78
LIMD2-207ENST00000579329 COL17A1Q9UMD9 1497 aaPredicted RBP38.64■■■■□ 3.78
LIMD2-207ENST00000579329 MAGI3Q5TCQ9 1506 aa38.62■■■■□ 3.77
LIMD2-207ENST00000579329 ABCA9Q8IUA7 1624 aa38.61■■■■□ 3.77
LIMD2-207ENST00000579329 PCF11O94913 1555 aaKnown RBP38.57■■■■□ 3.77
LIMD2-207ENST00000579329 CASKIN1Q8WXD9 1431 aa38.57■■■■□ 3.77
LIMD2-207ENST00000579329 CEP162Q5TB80 1403 aa38.56■■■■□ 3.76
LIMD2-207ENST00000579329 LOC105371045A0A1W2PR82 267 aa38.52■■■■□ 3.76
LIMD2-207ENST00000579329 FYCO1Q9BQS8 1478 aa38.49■■■■□ 3.75
LIMD2-207ENST00000579329 CDK11AQ9UQ88 783 aaPredicted RBP38.48■■■■□ 3.75
LIMD2-207ENST00000579329 LRRIQ1Q96JM4 1722 aa38.47■■■■□ 3.75
LIMD2-207ENST00000579329 CCDC18Q5T9S5 1454 aa38.47■■■■□ 3.75
LIMD2-207ENST00000579329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.4■■■■□ 3.74
LIMD2-207ENST00000579329 ILDR1Q86SU0 546 aaPredicted RBP38.38■■■■□ 3.73
LIMD2-207ENST00000579329 TROQ12816 1431 aaPredicted RBP38.37■■■■□ 3.73
LIMD2-207ENST00000579329 TTC37Q6PGP7 1564 aa38.36■■■■□ 3.73
LIMD2-207ENST00000579329 PHLDB1Q86UU1 1377 aa38.32■■■■□ 3.73
LIMD2-207ENST00000579329 NEO1Q92859 1461 aa38.32■■■■□ 3.72
LIMD2-207ENST00000579329 HECW2Q9P2P5 1572 aa38.31■■■■□ 3.72
LIMD2-207ENST00000579329 KIF14Q15058 1648 aa38.3■■■■□ 3.72
LIMD2-207ENST00000579329 ARAP3Q8WWN8 1544 aa38.28■■■■□ 3.72
LIMD2-207ENST00000579329 CFAP74Q9C0B2 1584 aa38.23■■■■□ 3.71
LIMD2-207ENST00000579329 FANCAO15360 1455 aa38.2■■■■□ 3.71
LIMD2-207ENST00000579329 PLCH2O75038 1416 aa38.18■■■■□ 3.7
LIMD2-207ENST00000579329 MYO5CQ9NQX4 1742 aa38.16■■■■□ 3.7
LIMD2-207ENST00000579329 AKNAQ7Z591 1439 aa38.13■■■■□ 3.7
LIMD2-207ENST00000579329 VPS8Q8N3P4 1428 aa38.12■■■■□ 3.69
LIMD2-207ENST00000579329 DENND4BO75064 1496 aaPredicted RBP38.04■■■■□ 3.68
LIMD2-207ENST00000579329 EFCAB2Q5VUJ9 269 aa38.04■■■■□ 3.68
LIMD2-207ENST00000579329 MTUS2Q5JR59 1369 aa38.04■■■■□ 3.68
LIMD2-207ENST00000579329 RAPGEF3O95398 923 aa38.03■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms