RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 IGF1RP08069 1367 aa18.81■□□□□ 0.6
CSNK1D-210ENST00000579308 KIF27Q86VH2 1401 aa18.73■□□□□ 0.59
CSNK1D-210ENST00000579308 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
CSNK1D-210ENST00000579308 KIAA0586Q9BVV6 1533 aa18.7■□□□□ 0.58
CSNK1D-210ENST00000579308 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
CSNK1D-210ENST00000579308 FAM69CQ0P6D2 419 aa18.65■□□□□ 0.58
CSNK1D-210ENST00000579308 CARMIL1Q5VZK9 1371 aa18.64■□□□□ 0.57
CSNK1D-210ENST00000579308 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
CSNK1D-210ENST00000579308 MAPKBP1O60336 1514 aa18.59■□□□□ 0.57
CSNK1D-210ENST00000579308 CUL7Q14999 1698 aa18.59■□□□□ 0.57
CSNK1D-210ENST00000579308 ADCY10Q96PN6 1610 aa18.58■□□□□ 0.56
CSNK1D-210ENST00000579308 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.56
CSNK1D-210ENST00000579308 PTPRGP23470 1445 aa18.57■□□□□ 0.56
CSNK1D-210ENST00000579308 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.55
CSNK1D-210ENST00000579308 DIP2BQ9P265 1576 aa18.51■□□□□ 0.55
CSNK1D-210ENST00000579308 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
CSNK1D-210ENST00000579308 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
CSNK1D-210ENST00000579308 TTBK1Q5TCY1 1321 aaPredicted RBP18.47■□□□□ 0.55
CSNK1D-210ENST00000579308 ABCC2Q92887 1545 aa18.44■□□□□ 0.54
CSNK1D-210ENST00000579308 DISP1Q96F81 1524 aa18.43■□□□□ 0.54
CSNK1D-210ENST00000579308 IQGAP2Q13576 1575 aa18.42■□□□□ 0.54
CSNK1D-210ENST00000579308 UHRF1BP1LA0JNW5 1464 aa18.42■□□□□ 0.54
CSNK1D-210ENST00000579308 RAPGEF2Q9Y4G8 1499 aa18.41■□□□□ 0.54
CSNK1D-210ENST00000579308 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
CSNK1D-210ENST00000579308 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
CSNK1D-210ENST00000579308 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.53
CSNK1D-210ENST00000579308 UGGT2Q9NYU1 1516 aa18.37■□□□□ 0.53
CSNK1D-210ENST00000579308 KDM4FA0A1W2PPD8 638 aa18.36■□□□□ 0.53
CSNK1D-210ENST00000579308 KDM6BO15054 1643 aa18.33■□□□□ 0.52
CSNK1D-210ENST00000579308 GLI2P10070 1586 aa18.33■□□□□ 0.52
CSNK1D-210ENST00000579308 KDM5BQ9UGL1 1544 aa18.33■□□□□ 0.52
CSNK1D-210ENST00000579308 EPRSP07814 1512 aaKnown RBP18.28■□□□□ 0.52
CSNK1D-210ENST00000579308 TSPOAP1O95153 1857 aa18.28■□□□□ 0.52
CSNK1D-210ENST00000579308 KIAA0556O60303 1618 aa18.26■□□□□ 0.51
CSNK1D-210ENST00000579308 PRXQ9BXM0 1461 aa18.25■□□□□ 0.51
CSNK1D-210ENST00000579308 COL17A1Q9UMD9 1497 aaPredicted RBP18.25■□□□□ 0.51
CSNK1D-210ENST00000579308 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
CSNK1D-210ENST00000579308 PPRC1Q5VV67 1664 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-210ENST00000579308 GOLGA3Q08378 1498 aa18.2■□□□□ 0.5
CSNK1D-210ENST00000579308 ZCCHC11Q5TAX3 1644 aaKnown RBP18.19■□□□□ 0.5
CSNK1D-210ENST00000579308 WDR7Q9Y4E6 1490 aa18.18■□□□□ 0.5
CSNK1D-210ENST00000579308 MAP3K4Q9Y6R4 1608 aa18.17■□□□□ 0.5
CSNK1D-210ENST00000579308 TEX14Q8IWB6 1497 aa18.16■□□□□ 0.5
CSNK1D-210ENST00000579308 ABCA8O94911 1581 aa18.15■□□□□ 0.5
CSNK1D-210ENST00000579308 KCNH8Q96L42 1107 aa18.13■□□□□ 0.49
CSNK1D-210ENST00000579308 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
CSNK1D-210ENST00000579308 CD109Q6YHK3 1445 aa18.11■□□□□ 0.49
CSNK1D-210ENST00000579308 CTTNBP2Q8WZ74 1663 aa18.1■□□□□ 0.49
CSNK1D-210ENST00000579308 MAGI3Q5TCQ9 1506 aa18.09■□□□□ 0.49
CSNK1D-210ENST00000579308 ADGRL1O94910 1474 aa18.08■□□□□ 0.49
CSNK1D-210ENST00000579308 P3H3Q8IVL6 736 aa18.08■□□□□ 0.48
CSNK1D-210ENST00000579308 ATP10BO94823 1461 aa18.05■□□□□ 0.48
CSNK1D-210ENST00000579308 FAM9AQ8IZU1 332 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-210ENST00000579308 ARID3CA6NKF2 412 aa18.02■□□□□ 0.48
CSNK1D-210ENST00000579308 CFAP43Q8NDM7 1665 aa17.99■□□□□ 0.47
CSNK1D-210ENST00000579308 ARAP3Q8WWN8 1544 aa17.96■□□□□ 0.47
CSNK1D-210ENST00000579308 EEA1Q15075 1411 aa17.96■□□□□ 0.47
CSNK1D-210ENST00000579308 SAMD9Q5K651 1589 aa17.96■□□□□ 0.46
CSNK1D-210ENST00000579308 PHLDB1Q86UU1 1377 aa17.94■□□□□ 0.46
CSNK1D-210ENST00000579308 NUP153P49790 1475 aaKnown RBP17.89■□□□□ 0.45
CSNK1D-210ENST00000579308 RAPGEF3O95398 923 aa17.89■□□□□ 0.45
CSNK1D-210ENST00000579308 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
CSNK1D-210ENST00000579308 ABCA9Q8IUA7 1624 aa17.88■□□□□ 0.45
CSNK1D-210ENST00000579308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
CSNK1D-210ENST00000579308 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
CSNK1D-210ENST00000579308 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
CSNK1D-210ENST00000579308 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
CSNK1D-210ENST00000579308 NEO1Q92859 1461 aa17.86■□□□□ 0.45
CSNK1D-210ENST00000579308 PLEKHD1A6NEE1 506 aa17.85■□□□□ 0.45
CSNK1D-210ENST00000579308 ILDR1Q86SU0 546 aaPredicted RBP17.85■□□□□ 0.45
CSNK1D-210ENST00000579308 HECW2Q9P2P5 1572 aa17.83■□□□□ 0.44
CSNK1D-210ENST00000579308 KIF21BO75037 1637 aa17.78■□□□□ 0.44
CSNK1D-210ENST00000579308 EFCAB5A4FU69 1503 aa17.76■□□□□ 0.43
CSNK1D-210ENST00000579308 FRMPD1Q5SYB0 1578 aa17.74■□□□□ 0.43
CSNK1D-210ENST00000579308 AKNAQ7Z591 1439 aa17.74■□□□□ 0.43
CSNK1D-210ENST00000579308 DENND4BO75064 1496 aaPredicted RBP17.73■□□□□ 0.43
CSNK1D-210ENST00000579308 PTPRMP28827 1452 aa17.73■□□□□ 0.43
CSNK1D-210ENST00000579308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.43
CSNK1D-210ENST00000579308 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.43
CSNK1D-210ENST00000579308 FANCAO15360 1455 aa17.71■□□□□ 0.43
CSNK1D-210ENST00000579308 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-210ENST00000579308 ARID4BQ4LE39 1312 aaPredicted RBP17.71■□□□□ 0.42
CSNK1D-210ENST00000579308 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
CSNK1D-210ENST00000579308 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
CSNK1D-210ENST00000579308 PLCH2O75038 1416 aa17.66■□□□□ 0.42
CSNK1D-210ENST00000579308 ARHGAP35Q9NRY4 1499 aa17.65■□□□□ 0.42
CSNK1D-210ENST00000579308 TTC37Q6PGP7 1564 aa17.65■□□□□ 0.42
CSNK1D-210ENST00000579308 FMN1Q68DA7 1419 aa17.64■□□□□ 0.42
CSNK1D-210ENST00000579308 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
CSNK1D-210ENST00000579308 ARHGEF40Q8TER5 1519 aa17.63■□□□□ 0.41
CSNK1D-210ENST00000579308 ATP1B4Q9UN42 357 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-210ENST00000579308 RICTORQ6R327 1708 aa17.63■□□□□ 0.41
CSNK1D-210ENST00000579308 YEATS2Q9ULM3 1422 aa17.63■□□□□ 0.41
CSNK1D-210ENST00000579308 MAGI2Q86UL8 1455 aa17.63■□□□□ 0.41
CSNK1D-210ENST00000579308 CDK11AQ9UQ88 783 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-210ENST00000579308 SCAPERQ9BY12 1400 aa17.62■□□□□ 0.41
CSNK1D-210ENST00000579308 ZMYM4Q5VZL5 1548 aa17.62■□□□□ 0.41
CSNK1D-210ENST00000579308 EFCAB2Q5VUJ9 269 aa17.61■□□□□ 0.41
CSNK1D-210ENST00000579308 CFAP74Q9C0B2 1584 aa17.6■□□□□ 0.41
CSNK1D-210ENST00000579308 MADDQ8WXG6 1647 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms