RNA–Protein interactions for RNA: ENST00000579066.1

CTC1-206, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-206ENST00000579066 KIF27Q86VH2 1401 aa19.66■□□□□ 0.74
CTC1-206ENST00000579066 CUL7Q14999 1698 aa19.61■□□□□ 0.73
CTC1-206ENST00000579066 KIAA0586Q9BVV6 1533 aa19.55■□□□□ 0.72
CTC1-206ENST00000579066 CARMIL1Q5VZK9 1371 aa19.54■□□□□ 0.72
CTC1-206ENST00000579066 KIF13AQ9H1H9 1805 aa19.48■□□□□ 0.71
CTC1-206ENST00000579066 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
CTC1-206ENST00000579066 ADCY10Q96PN6 1610 aa19.47■□□□□ 0.71
CTC1-206ENST00000579066 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
CTC1-206ENST00000579066 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
CTC1-206ENST00000579066 PTPRGP23470 1445 aa19.37■□□□□ 0.69
CTC1-206ENST00000579066 FAM69CQ0P6D2 419 aa19.37■□□□□ 0.69
CTC1-206ENST00000579066 MAPKBP1O60336 1514 aa19.36■□□□□ 0.69
CTC1-206ENST00000579066 ABCC10Q5T3U5 1492 aa19.35■□□□□ 0.69
CTC1-206ENST00000579066 RAPGEF2Q9Y4G8 1499 aa19.35■□□□□ 0.69
CTC1-206ENST00000579066 DIP2BQ9P265 1576 aa19.35■□□□□ 0.69
CTC1-206ENST00000579066 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
CTC1-206ENST00000579066 TNIKQ9UKE5 1360 aa19.32■□□□□ 0.68
CTC1-206ENST00000579066 DISP1Q96F81 1524 aa19.32■□□□□ 0.68
CTC1-206ENST00000579066 TSPOAP1O95153 1857 aa19.27■□□□□ 0.68
CTC1-206ENST00000579066 UGGT2Q9NYU1 1516 aa19.26■□□□□ 0.67
CTC1-206ENST00000579066 KIAA0556O60303 1618 aa19.25■□□□□ 0.67
CTC1-206ENST00000579066 ABCC2Q92887 1545 aa19.25■□□□□ 0.67
CTC1-206ENST00000579066 CTTNBP2Q8WZ74 1663 aa19.24■□□□□ 0.67
CTC1-206ENST00000579066 AEBP2Q6ZN18 517 aaPredicted RBP19.23■□□□□ 0.67
CTC1-206ENST00000579066 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
CTC1-206ENST00000579066 ASXL2Q76L83 1435 aa19.2■□□□□ 0.66
CTC1-206ENST00000579066 UHRF1BP1LA0JNW5 1464 aa19.2■□□□□ 0.66
CTC1-206ENST00000579066 PRXQ9BXM0 1461 aa19.18■□□□□ 0.66
CTC1-206ENST00000579066 KDM6BO15054 1643 aa19.16■□□□□ 0.66
CTC1-206ENST00000579066 ZCCHC11Q5TAX3 1644 aaKnown RBP19.15■□□□□ 0.66
CTC1-206ENST00000579066 PLB1Q6P1J6 1458 aa19.13■□□□□ 0.65
CTC1-206ENST00000579066 KDM5BQ9UGL1 1544 aa19.13■□□□□ 0.65
CTC1-206ENST00000579066 PPRC1Q5VV67 1664 aaKnown RBP19.13■□□□□ 0.65
CTC1-206ENST00000579066 GLI2P10070 1586 aa19.1■□□□□ 0.65
CTC1-206ENST00000579066 EPRSP07814 1512 aaKnown RBP19.08■□□□□ 0.64
CTC1-206ENST00000579066 GOLGA3Q08378 1498 aa19.08■□□□□ 0.64
CTC1-206ENST00000579066 P3H3Q8IVL6 736 aa19.07■□□□□ 0.64
CTC1-206ENST00000579066 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
CTC1-206ENST00000579066 ABCA8O94911 1581 aa19.06■□□□□ 0.64
CTC1-206ENST00000579066 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
CTC1-206ENST00000579066 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
CTC1-206ENST00000579066 ARID3CA6NKF2 412 aa19.02■□□□□ 0.64
CTC1-206ENST00000579066 WDR7Q9Y4E6 1490 aa19.01■□□□□ 0.63
CTC1-206ENST00000579066 COL17A1Q9UMD9 1497 aaPredicted RBP18.99■□□□□ 0.63
CTC1-206ENST00000579066 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
CTC1-206ENST00000579066 KCNH8Q96L42 1107 aa18.97■□□□□ 0.63
CTC1-206ENST00000579066 SAMD9Q5K651 1589 aa18.95■□□□□ 0.62
CTC1-206ENST00000579066 KDM4FA0A1W2PPD8 638 aa18.95■□□□□ 0.62
CTC1-206ENST00000579066 EEA1Q15075 1411 aa18.92■□□□□ 0.62
CTC1-206ENST00000579066 TEX14Q8IWB6 1497 aa18.91■□□□□ 0.62
CTC1-206ENST00000579066 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
CTC1-206ENST00000579066 ATP10BO94823 1461 aa18.9■□□□□ 0.62
CTC1-206ENST00000579066 CFAP43Q8NDM7 1665 aa18.89■□□□□ 0.61
CTC1-206ENST00000579066 CD109Q6YHK3 1445 aa18.89■□□□□ 0.61
CTC1-206ENST00000579066 RAPGEF6Q8TEU7 1601 aa18.88■□□□□ 0.61
CTC1-206ENST00000579066 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
CTC1-206ENST00000579066 KIF21BO75037 1637 aa18.84■□□□□ 0.61
CTC1-206ENST00000579066 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
CTC1-206ENST00000579066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.82■□□□□ 0.6
CTC1-206ENST00000579066 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
CTC1-206ENST00000579066 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
CTC1-206ENST00000579066 ADGRL1O94910 1474 aa18.81■□□□□ 0.6
CTC1-206ENST00000579066 NUP153P49790 1475 aaKnown RBP18.8■□□□□ 0.6
CTC1-206ENST00000579066 ABCA9Q8IUA7 1624 aa18.76■□□□□ 0.59
CTC1-206ENST00000579066 UBTFP17480 764 aaKnown RBP18.73■□□□□ 0.59
CTC1-206ENST00000579066 EFCAB5A4FU69 1503 aa18.73■□□□□ 0.59
CTC1-206ENST00000579066 CDK13Q14004 1512 aaKnown RBP18.69■□□□□ 0.58
CTC1-206ENST00000579066 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
CTC1-206ENST00000579066 RAPGEF3O95398 923 aa18.66■□□□□ 0.58
CTC1-206ENST00000579066 PLEKHD1A6NEE1 506 aa18.65■□□□□ 0.58
CTC1-206ENST00000579066 ARHGAP35Q9NRY4 1499 aa18.65■□□□□ 0.58
CTC1-206ENST00000579066 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
CTC1-206ENST00000579066 FRMPD1Q5SYB0 1578 aa18.64■□□□□ 0.57
CTC1-206ENST00000579066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.63■□□□□ 0.57
CTC1-206ENST00000579066 TTC37Q6PGP7 1564 aa18.63■□□□□ 0.57
CTC1-206ENST00000579066 NEO1Q92859 1461 aa18.62■□□□□ 0.57
CTC1-206ENST00000579066 PHLDB1Q86UU1 1377 aa18.58■□□□□ 0.57
CTC1-206ENST00000579066 HECW1Q76N89 1606 aa18.57■□□□□ 0.56
CTC1-206ENST00000579066 LRRIQ1Q96JM4 1722 aa18.55■□□□□ 0.56
CTC1-206ENST00000579066 FANCAO15360 1455 aa18.55■□□□□ 0.56
CTC1-206ENST00000579066 FMN1Q68DA7 1419 aa18.55■□□□□ 0.56
CTC1-206ENST00000579066 AKNAQ7Z591 1439 aa18.55■□□□□ 0.56
CTC1-206ENST00000579066 HECW2Q9P2P5 1572 aa18.54■□□□□ 0.56
CTC1-206ENST00000579066 RICTORQ6R327 1708 aa18.54■□□□□ 0.56
CTC1-206ENST00000579066 DENND4BO75064 1496 aaPredicted RBP18.52■□□□□ 0.56
CTC1-206ENST00000579066 CFAP74Q9C0B2 1584 aa18.51■□□□□ 0.55
CTC1-206ENST00000579066 KIF14Q15058 1648 aa18.51■□□□□ 0.55
CTC1-206ENST00000579066 ADAMTSL3P82987 1691 aa18.49■□□□□ 0.55
CTC1-206ENST00000579066 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
CTC1-206ENST00000579066 ARHGEF40Q8TER5 1519 aa18.48■□□□□ 0.55
CTC1-206ENST00000579066 PCF11O94913 1555 aaKnown RBP18.47■□□□□ 0.55
CTC1-206ENST00000579066 BCORL1Q5H9F3 1711 aa18.47■□□□□ 0.55
CTC1-206ENST00000579066 MYO5CQ9NQX4 1742 aa18.46■□□□□ 0.55
CTC1-206ENST00000579066 PLCH2O75038 1416 aa18.46■□□□□ 0.55
CTC1-206ENST00000579066 SIGLEC1Q9BZZ2 1709 aa18.46■□□□□ 0.55
CTC1-206ENST00000579066 YEATS2Q9ULM3 1422 aa18.45■□□□□ 0.54
CTC1-206ENST00000579066 MADDQ8WXG6 1647 aa18.45■□□□□ 0.54
CTC1-206ENST00000579066 SCAPERQ9BY12 1400 aa18.44■□□□□ 0.54
CTC1-206ENST00000579066 TROQ12816 1431 aaPredicted RBP18.43■□□□□ 0.54
CTC1-206ENST00000579066 PTPRMP28827 1452 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms