RNA–Protein interactions for RNA: ENST00000579039.2

NCOA4-202, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 2 BASIC

Gene NCOA4, Length 2,211 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-202ENST00000579039 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.134e-7■■■■□ 25.8
NCOA4-202ENST00000579039 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
NCOA4-202ENST00000579039 APLP2Q06481 763 aa15.83■□□□□ 0.13
NCOA4-202ENST00000579039 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
NCOA4-202ENST00000579039 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.12
NCOA4-202ENST00000579039 CENPBP07199 599 aaPredicted RBP15.82■□□□□ 0.12
NCOA4-202ENST00000579039 GTF3C3Q9Y5Q9 886 aa15.82■□□□□ 0.12
NCOA4-202ENST00000579039 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
NCOA4-202ENST00000579039 P3H3Q8IVL6 736 aa15.77■□□□□ 0.12
NCOA4-202ENST00000579039 PBRM1Q86U86 1689 aa15.77■□□□□ 0.11
NCOA4-202ENST00000579039 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
NCOA4-202ENST00000579039 CTTNBP2Q8WZ74 1663 aa15.73■□□□□ 0.11
NCOA4-202ENST00000579039 ADAMTS12P58397 1594 aa15.72■□□□□ 0.11
NCOA4-202ENST00000579039 KANK4Q5T7N3 995 aaPredicted RBP15.71■□□□□ 0.11
NCOA4-202ENST00000579039 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.11
NCOA4-202ENST00000579039 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
NCOA4-202ENST00000579039 EFCAB5A4FU69 1503 aa15.69■□□□□ 0.1
NCOA4-202ENST00000579039 SNAPC4Q5SXM2 1469 aa15.68■□□□□ 0.1
NCOA4-202ENST00000579039 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
NCOA4-202ENST00000579039 SAMD9Q5K651 1589 aa15.61■□□□□ 0.09
NCOA4-202ENST00000579039 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
NCOA4-202ENST00000579039 PCF11O94913 1555 aaKnown RBP15.61■□□□□ 0.09
NCOA4-202ENST00000579039 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
NCOA4-202ENST00000579039 DIEXFQ68CQ4 756 aaKnown RBP15.6■□□□□ 0.09
NCOA4-202ENST00000579039 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
NCOA4-202ENST00000579039 FMN1Q68DA7 1419 aa15.6■□□□□ 0.09
NCOA4-202ENST00000579039 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
NCOA4-202ENST00000579039 TIAM1Q13009 1591 aa15.59■□□□□ 0.09
NCOA4-202ENST00000579039 CASKIN1Q8WXD9 1431 aa15.58■□□□□ 0.08
NCOA4-202ENST00000579039 FBLN2P98095 1184 aa15.58■□□□□ 0.08
NCOA4-202ENST00000579039 MAP3K1Q13233 1512 aa15.58■□□□□ 0.08
NCOA4-202ENST00000579039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
NCOA4-202ENST00000579039 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
NCOA4-202ENST00000579039 SYNJ2O15056 1496 aa15.57■□□□□ 0.08
NCOA4-202ENST00000579039 FYCO1Q9BQS8 1478 aa15.57■□□□□ 0.08
NCOA4-202ENST00000579039 KIAA0586Q9BVV6 1533 aa15.55■□□□□ 0.08
NCOA4-202ENST00000579039 LRRC9Q6ZRR7 1453 aa15.54■□□□□ 0.08
NCOA4-202ENST00000579039 UGGT2Q9NYU1 1516 aa15.51■□□□□ 0.07
NCOA4-202ENST00000579039 CCER1Q8TC90 406 aaPredicted RBP15.51■□□□□ 0.07
NCOA4-202ENST00000579039 RRBP1Q9P2E9 1410 aaKnown RBP15.49■□□□□ 0.07
NCOA4-202ENST00000579039 CFAP43Q8NDM7 1665 aa15.49■□□□□ 0.07
NCOA4-202ENST00000579039 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
NCOA4-202ENST00000579039 NUP160Q12769 1436 aa15.47■□□□□ 0.07
NCOA4-202ENST00000579039 CCNB3Q8WWL7 1395 aa15.47■□□□□ 0.07
NCOA4-202ENST00000579039 DISP1Q96F81 1524 aa15.47■□□□□ 0.07
NCOA4-202ENST00000579039 PHLDB1Q86UU1 1377 aa15.46■□□□□ 0.06
NCOA4-202ENST00000579039 KIAA0556O60303 1618 aa15.43■□□□□ 0.06
NCOA4-202ENST00000579039 JPH4Q96JJ6 628 aa15.43■□□□□ 0.06
NCOA4-202ENST00000579039 MTUS2Q5JR59 1369 aa15.42■□□□□ 0.06
NCOA4-202ENST00000579039 LRRIQ1Q96JM4 1722 aa15.42■□□□□ 0.06
NCOA4-202ENST00000579039 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
NCOA4-202ENST00000579039 ITGAEP38570 1179 aa15.39■□□□□ 0.05
NCOA4-202ENST00000579039 HECW1Q76N89 1606 aa15.38■□□□□ 0.05
NCOA4-202ENST00000579039 CCDC18Q5T9S5 1454 aa15.37■□□□□ 0.05
NCOA4-202ENST00000579039 EPRSP07814 1512 aaKnown RBP15.37■□□□□ 0.05
NCOA4-202ENST00000579039 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
NCOA4-202ENST00000579039 CARMIL2Q6F5E8 1435 aa15.35■□□□□ 0.05
NCOA4-202ENST00000579039 CDK13Q14004 1512 aaKnown RBP15.34■□□□□ 0.05
NCOA4-202ENST00000579039 MAGI3Q5TCQ9 1506 aa15.34■□□□□ 0.05
NCOA4-202ENST00000579039 EHBP1L1Q8N3D4 1523 aa15.32■□□□□ 0.04
NCOA4-202ENST00000579039 NCOA2Q15596 1464 aa15.32■□□□□ 0.04
NCOA4-202ENST00000579039 CHD1O14646 1710 aa15.32■□□□□ 0.04
NCOA4-202ENST00000579039 ZNF316A6NFI3 1004 aaPredicted RBP15.31■□□□□ 0.04
NCOA4-202ENST00000579039 NUP153P49790 1475 aaKnown RBP15.31■□□□□ 0.04
NCOA4-202ENST00000579039 PLB1Q6P1J6 1458 aa15.3■□□□□ 0.04
NCOA4-202ENST00000579039 FGD6Q6ZV73 1430 aa15.3■□□□□ 0.04
NCOA4-202ENST00000579039 RAPGEF6Q8TEU7 1601 aa15.3■□□□□ 0.04
NCOA4-202ENST00000579039 PRG4Q92954 1404 aaPredicted RBP15.28■□□□□ 0.04
NCOA4-202ENST00000579039 SUPT6HQ7KZ85 1726 aaKnown RBP15.28■□□□□ 0.04
NCOA4-202ENST00000579039 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.03
NCOA4-202ENST00000579039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.27■□□□□ 0.03
NCOA4-202ENST00000579039 BCL11AQ9H165 835 aa15.27■□□□□ 0.03
NCOA4-202ENST00000579039 ARHGEF11O15085 1522 aa15.26■□□□□ 0.03
NCOA4-202ENST00000579039 CLSPNQ9HAW4 1339 aa15.25■□□□□ 0.03
NCOA4-202ENST00000579039 CDK11AQ9UQ88 783 aaPredicted RBP15.23■□□□□ 0.03
NCOA4-202ENST00000579039 ANP32EQ9BTT0 268 aa15.23■□□□□ 0.03
NCOA4-202ENST00000579039 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
NCOA4-202ENST00000579039 DHX57Q6P158 1386 aaKnown RBP15.22■□□□□ 0.03
NCOA4-202ENST00000579039 RAB3GAP2Q9H2M9 1393 aa15.21■□□□□ 0.03
NCOA4-202ENST00000579039 PTPRGP23470 1445 aa15.21■□□□□ 0.03
NCOA4-202ENST00000579039 ABCA8O94911 1581 aa15.19■□□□□ 0.02
NCOA4-202ENST00000579039 SETD5Q9C0A6 1442 aa15.19■□□□□ 0.02
NCOA4-202ENST00000579039 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
NCOA4-202ENST00000579039 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
NCOA4-202ENST00000579039 TROQ12816 1431 aaPredicted RBP15.17■□□□□ 0.02
NCOA4-202ENST00000579039 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
NCOA4-202ENST00000579039 ERCC6L2Q5T890 1561 aa15.16■□□□□ 0.02
NCOA4-202ENST00000579039 ATP10BO94823 1461 aa15.15■□□□□ 0.02
NCOA4-202ENST00000579039 MIER1Q8N108 512 aa15.15■□□□□ 0.02
NCOA4-202ENST00000579039 MIA2Q96PC5 1412 aa15.15■□□□□ 0.02
NCOA4-202ENST00000579039 CLASP1Q7Z460 1538 aa15.14■□□□□ 0.01
NCOA4-202ENST00000579039 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
NCOA4-202ENST00000579039 PLEKHD1A6NEE1 506 aa15.13■□□□□ 0.01
NCOA4-202ENST00000579039 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
NCOA4-202ENST00000579039 ZNF644Q9H582 1327 aaPredicted RBP15.09■□□□□ 0.01
NCOA4-202ENST00000579039 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
NCOA4-202ENST00000579039 CHIC2Q9UKJ5 165 aa15.09■□□□□ 0.01
NCOA4-202ENST00000579039 KIF14Q15058 1648 aa15.08■□□□□ 0.01
NCOA4-202ENST00000579039 CFDP1Q9UEE9 299 aaPredicted RBP15.07■□□□□ 0
NCOA4-202ENST00000579039 GPATCH8Q9UKJ3 1502 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms