RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 DIP2BQ9P265 1576 aa15.14■□□□□ 0.01
PPP4R1-211ENST00000578875 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
PPP4R1-211ENST00000578875 ILDR2Q71H61 639 aa15.11■□□□□ 0.01
PPP4R1-211ENST00000578875 LMTK3Q96Q04 1460 aa15.08■□□□□ 0
PPP4R1-211ENST00000578875 MAPKBP1O60336 1514 aa15.07■□□□□ 0
PPP4R1-211ENST00000578875 COL17A1Q9UMD9 1497 aaPredicted RBP15.05■□□□□ -0
PPP4R1-211ENST00000578875 ABCA10Q8WWZ4 1543 aa15.05■□□□□ -0
PPP4R1-211ENST00000578875 ABCA5Q8WWZ7 1642 aa15.05■□□□□ -0
PPP4R1-211ENST00000578875 ADCY10Q96PN6 1610 aa15.02□□□□□ -0.01
PPP4R1-211ENST00000578875 SOCS7O14512 581 aa15.01□□□□□ -0.01
PPP4R1-211ENST00000578875 ADAMTS12P58397 1594 aa14.99□□□□□ -0.01
PPP4R1-211ENST00000578875 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
PPP4R1-211ENST00000578875 TTBK1Q5TCY1 1321 aaPredicted RBP14.96□□□□□ -0.01
PPP4R1-211ENST00000578875 PPRC1Q5VV67 1664 aaKnown RBP14.9□□□□□ -0.02
PPP4R1-211ENST00000578875 DISP3Q9P2K9 1392 aa14.89□□□□□ -0.03
PPP4R1-211ENST00000578875 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
PPP4R1-211ENST00000578875 ASXL2Q76L83 1435 aa14.85□□□□□ -0.03
PPP4R1-211ENST00000578875 PTPRGP23470 1445 aa14.82□□□□□ -0.04
PPP4R1-211ENST00000578875 GLI2P10070 1586 aa14.79□□□□□ -0.04
PPP4R1-211ENST00000578875 RUSC2Q8N2Y8 1516 aa14.79□□□□□ -0.04
PPP4R1-211ENST00000578875 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
PPP4R1-211ENST00000578875 PLB1Q6P1J6 1458 aa14.77□□□□□ -0.04
PPP4R1-211ENST00000578875 CERKQ8TCT0 537 aa14.77□□□□□ -0.05
PPP4R1-211ENST00000578875 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
PPP4R1-211ENST00000578875 ABCC2Q92887 1545 aa14.75□□□□□ -0.05
PPP4R1-211ENST00000578875 EPRSP07814 1512 aaKnown RBP14.73□□□□□ -0.05
PPP4R1-211ENST00000578875 HSPA2P54652 639 aa14.73□□□□□ -0.05
PPP4R1-211ENST00000578875 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.05
PPP4R1-211ENST00000578875 PTPRMP28827 1452 aa14.69□□□□□ -0.06
PPP4R1-211ENST00000578875 MAP3K4Q9Y6R4 1608 aa14.68□□□□□ -0.06
PPP4R1-211ENST00000578875 TEX14Q8IWB6 1497 aa14.68□□□□□ -0.06
PPP4R1-211ENST00000578875 TNIKQ9UKE5 1360 aa14.67□□□□□ -0.06
PPP4R1-211ENST00000578875 CUL7Q14999 1698 aa14.67□□□□□ -0.06
PPP4R1-211ENST00000578875 KIF21BO75037 1637 aa14.65□□□□□ -0.06
PPP4R1-211ENST00000578875 KCNH8Q96L42 1107 aa14.64□□□□□ -0.07
PPP4R1-211ENST00000578875 PLPPR3Q6T4P5 718 aa14.63□□□□□ -0.07
PPP4R1-211ENST00000578875 UACAQ9BZF9 1416 aa14.63□□□□□ -0.07
PPP4R1-211ENST00000578875 UHRF1BP1LA0JNW5 1464 aa14.61□□□□□ -0.07
PPP4R1-211ENST00000578875 IGF1RP08069 1367 aa14.6□□□□□ -0.07
PPP4R1-211ENST00000578875 PCF11O94913 1555 aaKnown RBP14.6□□□□□ -0.07
PPP4R1-211ENST00000578875 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
PPP4R1-211ENST00000578875 KDM5BQ9UGL1 1544 aa14.58□□□□□ -0.08
PPP4R1-211ENST00000578875 CD109Q6YHK3 1445 aa14.58□□□□□ -0.08
PPP4R1-211ENST00000578875 ADAMTSL3P82987 1691 aa14.57□□□□□ -0.08
PPP4R1-211ENST00000578875 CARMIL2Q6F5E8 1435 aa14.57□□□□□ -0.08
PPP4R1-211ENST00000578875 RAPGEF3O95398 923 aa14.54□□□□□ -0.08
PPP4R1-211ENST00000578875 ARID4BQ4LE39 1312 aaPredicted RBP14.54□□□□□ -0.08
PPP4R1-211ENST00000578875 SPATA31D1Q6ZQQ2 1576 aa14.52□□□□□ -0.08
PPP4R1-211ENST00000578875 MAGI3Q5TCQ9 1506 aa14.52□□□□□ -0.08
PPP4R1-211ENST00000578875 ZCCHC11Q5TAX3 1644 aaKnown RBP14.52□□□□□ -0.09
PPP4R1-211ENST00000578875 WDR7Q9Y4E6 1490 aa14.5□□□□□ -0.09
PPP4R1-211ENST00000578875 DISP1Q96F81 1524 aa14.49□□□□□ -0.09
PPP4R1-211ENST00000578875 MADDQ8WXG6 1647 aa14.48□□□□□ -0.09
PPP4R1-211ENST00000578875 CARMIL1Q5VZK9 1371 aa14.45□□□□□ -0.1
PPP4R1-211ENST00000578875 ARAP3Q8WWN8 1544 aa14.44□□□□□ -0.1
PPP4R1-211ENST00000578875 BCORL1Q5H9F3 1711 aa14.43□□□□□ -0.1
PPP4R1-211ENST00000578875 ARID3CA6NKF2 412 aa14.42□□□□□ -0.1
PPP4R1-211ENST00000578875 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-211ENST00000578875 RIMS1Q86UR5 1692 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-211ENST00000578875 CFAP43Q8NDM7 1665 aa14.39□□□□□ -0.11
PPP4R1-211ENST00000578875 IQGAP2Q13576 1575 aa14.39□□□□□ -0.11
PPP4R1-211ENST00000578875 MLECQ14165 292 aa14.38□□□□□ -0.11
PPP4R1-211ENST00000578875 KIF27Q86VH2 1401 aa14.38□□□□□ -0.11
PPP4R1-211ENST00000578875 CEBPAP49715 358 aaPredicted RBP14.35□□□□□ -0.11
PPP4R1-211ENST00000578875 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
PPP4R1-211ENST00000578875 YEATS2Q9ULM3 1422 aa14.31□□□□□ -0.12
PPP4R1-211ENST00000578875 UGGT2Q9NYU1 1516 aa14.29□□□□□ -0.12
PPP4R1-211ENST00000578875 KIAA0556O60303 1618 aa14.28□□□□□ -0.12
PPP4R1-211ENST00000578875 PHLDB1Q86UU1 1377 aa14.28□□□□□ -0.12
PPP4R1-211ENST00000578875 FRMPD1Q5SYB0 1578 aa14.27□□□□□ -0.12
PPP4R1-211ENST00000578875 STRCQ7RTU9 1775 aa14.27□□□□□ -0.13
PPP4R1-211ENST00000578875 ABCA8O94911 1581 aa14.24□□□□□ -0.13
PPP4R1-211ENST00000578875 SIGLEC1Q9BZZ2 1709 aa14.24□□□□□ -0.13
PPP4R1-211ENST00000578875 ATP10BO94823 1461 aa14.23□□□□□ -0.13
PPP4R1-211ENST00000578875 UBAP1LF5GYI3 381 aa14.22□□□□□ -0.13
PPP4R1-211ENST00000578875 LTBP4Q8N2S1 1624 aa14.22□□□□□ -0.13
PPP4R1-211ENST00000578875 P3H3Q8IVL6 736 aa14.21□□□□□ -0.13
PPP4R1-211ENST00000578875 NEO1Q92859 1461 aa14.2□□□□□ -0.14
PPP4R1-211ENST00000578875 POGZQ7Z3K3 1410 aa14.19□□□□□ -0.14
PPP4R1-211ENST00000578875 PTPRTO14522 1441 aa14.17□□□□□ -0.14
PPP4R1-211ENST00000578875 ABCA9Q8IUA7 1624 aa14.17□□□□□ -0.14
PPP4R1-211ENST00000578875 DENND4BO75064 1496 aaPredicted RBP14.17□□□□□ -0.14
PPP4R1-211ENST00000578875 HSPA1LP34931 641 aa14.16□□□□□ -0.14
PPP4R1-211ENST00000578875 ARHGEF40Q8TER5 1519 aa14.15□□□□□ -0.14
PPP4R1-211ENST00000578875 FANCAO15360 1455 aa14.15□□□□□ -0.14
PPP4R1-211ENST00000578875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
PPP4R1-211ENST00000578875 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
PPP4R1-211ENST00000578875 AKNAQ7Z591 1439 aa14.15□□□□□ -0.14
PPP4R1-211ENST00000578875 RAPGEF2Q9Y4G8 1499 aa14.14□□□□□ -0.15
PPP4R1-211ENST00000578875 FHOD3Q2V2M9 1422 aa14.13□□□□□ -0.15
PPP4R1-211ENST00000578875 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
PPP4R1-211ENST00000578875 ZNF335Q9H4Z2 1342 aaPredicted RBP14.13□□□□□ -0.15
PPP4R1-211ENST00000578875 PREX1Q8TCU6 1659 aa14.11□□□□□ -0.15
PPP4R1-211ENST00000578875 FER1L4A9Z1Z3 1794 aa14.11□□□□□ -0.15
PPP4R1-211ENST00000578875 UHRF1BP1Q6BDS2 1440 aa14.1□□□□□ -0.15
PPP4R1-211ENST00000578875 RICTORQ6R327 1708 aa14.1□□□□□ -0.15
PPP4R1-211ENST00000578875 IQSEC2Q5JU85 1478 aa14.09□□□□□ -0.15
PPP4R1-211ENST00000578875 MED1Q15648 1581 aaPredicted RBP14.09□□□□□ -0.15
PPP4R1-211ENST00000578875 PIP4K2BP78356 416 aa14.08□□□□□ -0.16
PPP4R1-211ENST00000578875 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms