RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 SOGA1O94964 1423 aa13.68□□□□□ -0.22
CDK5RAP3-209ENST00000578663 PPRC1Q5VV67 1664 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-209ENST00000578663 ADCY10Q96PN6 1610 aa13.61□□□□□ -0.23
CDK5RAP3-209ENST00000578663 TOP2BQ02880 1626 aa13.58□□□□□ -0.24
CDK5RAP3-209ENST00000578663 FGD5Q6ZNL6 1462 aa13.58□□□□□ -0.24
CDK5RAP3-209ENST00000578663 NUP160Q12769 1436 aa13.57□□□□□ -0.24
CDK5RAP3-209ENST00000578663 COL17A1Q9UMD9 1497 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-209ENST00000578663 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
CDK5RAP3-209ENST00000578663 ABCA5Q8WWZ7 1642 aa13.52□□□□□ -0.25
CDK5RAP3-209ENST00000578663 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-209ENST00000578663 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDK5RAP3-209ENST00000578663 CUX1P39880 1505 aa13.48□□□□□ -0.25
CDK5RAP3-209ENST00000578663 ADAMTS12P58397 1594 aa13.47□□□□□ -0.25
CDK5RAP3-209ENST00000578663 CERKQ8TCT0 537 aa13.46□□□□□ -0.25
CDK5RAP3-209ENST00000578663 GLI2P10070 1586 aa13.44□□□□□ -0.26
CDK5RAP3-209ENST00000578663 PCF11O94913 1555 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-209ENST00000578663 ABCA10Q8WWZ4 1543 aa13.41□□□□□ -0.26
CDK5RAP3-209ENST00000578663 KIF21BO75037 1637 aa13.41□□□□□ -0.26
CDK5RAP3-209ENST00000578663 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
CDK5RAP3-209ENST00000578663 ADAMTSL3P82987 1691 aa13.37□□□□□ -0.27
CDK5RAP3-209ENST00000578663 PTPRMP28827 1452 aa13.36□□□□□ -0.27
CDK5RAP3-209ENST00000578663 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
CDK5RAP3-209ENST00000578663 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
CDK5RAP3-209ENST00000578663 CUL7Q14999 1698 aa13.29□□□□□ -0.28
CDK5RAP3-209ENST00000578663 FHAD1B1AJZ9 1412 aa13.29□□□□□ -0.28
CDK5RAP3-209ENST00000578663 ASXL2Q76L83 1435 aa13.29□□□□□ -0.28
CDK5RAP3-209ENST00000578663 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.29
CDK5RAP3-209ENST00000578663 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
CDK5RAP3-209ENST00000578663 PLB1Q6P1J6 1458 aa13.26□□□□□ -0.29
CDK5RAP3-209ENST00000578663 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
CDK5RAP3-209ENST00000578663 HSPA2P54652 639 aa13.23□□□□□ -0.29
CDK5RAP3-209ENST00000578663 MADDQ8WXG6 1647 aa13.23□□□□□ -0.29
CDK5RAP3-209ENST00000578663 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-209ENST00000578663 ABCC2Q92887 1545 aa13.23□□□□□ -0.29
CDK5RAP3-209ENST00000578663 BCORL1Q5H9F3 1711 aa13.21□□□□□ -0.3
CDK5RAP3-209ENST00000578663 BIVM-ERCC5R4GMW8 1640 aa13.2□□□□□ -0.3
CDK5RAP3-209ENST00000578663 KIAA0586Q9BVV6 1533 aa13.19□□□□□ -0.3
CDK5RAP3-209ENST00000578663 RIMS1Q86UR5 1692 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-209ENST00000578663 STRCQ7RTU9 1775 aa13.14□□□□□ -0.31
CDK5RAP3-209ENST00000578663 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-209ENST00000578663 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-209ENST00000578663 PTPRGP23470 1445 aa13.08□□□□□ -0.32
CDK5RAP3-209ENST00000578663 UHRF1BP1LA0JNW5 1464 aa13.08□□□□□ -0.32
CDK5RAP3-209ENST00000578663 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
CDK5RAP3-209ENST00000578663 MAGI3Q5TCQ9 1506 aa13.07□□□□□ -0.32
CDK5RAP3-209ENST00000578663 KDM5BQ9UGL1 1544 aa13.05□□□□□ -0.32
CDK5RAP3-209ENST00000578663 LTBP4Q8N2S1 1624 aa13.04□□□□□ -0.32
CDK5RAP3-209ENST00000578663 IQSEC2Q5JU85 1478 aa13.02□□□□□ -0.33
CDK5RAP3-209ENST00000578663 ARAP3Q8WWN8 1544 aa13.01□□□□□ -0.33
CDK5RAP3-209ENST00000578663 TTBK1Q5TCY1 1321 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-209ENST00000578663 PREX1Q8TCU6 1659 aa12.99□□□□□ -0.33
CDK5RAP3-209ENST00000578663 CD109Q6YHK3 1445 aa12.98□□□□□ -0.33
CDK5RAP3-209ENST00000578663 UACAQ9BZF9 1416 aa12.98□□□□□ -0.33
CDK5RAP3-209ENST00000578663 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
CDK5RAP3-209ENST00000578663 TNIKQ9UKE5 1360 aa12.97□□□□□ -0.33
CDK5RAP3-209ENST00000578663 WDR7Q9Y4E6 1490 aa12.97□□□□□ -0.33
CDK5RAP3-209ENST00000578663 SIGLEC1Q9BZZ2 1709 aa12.95□□□□□ -0.34
CDK5RAP3-209ENST00000578663 CARMIL2Q6F5E8 1435 aa12.94□□□□□ -0.34
CDK5RAP3-209ENST00000578663 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
CDK5RAP3-209ENST00000578663 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
CDK5RAP3-209ENST00000578663 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
CDK5RAP3-209ENST00000578663 TTC37Q6PGP7 1564 aa12.91□□□□□ -0.34
CDK5RAP3-209ENST00000578663 IGF1RP08069 1367 aa12.91□□□□□ -0.34
CDK5RAP3-209ENST00000578663 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
CDK5RAP3-209ENST00000578663 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
CDK5RAP3-209ENST00000578663 ARID4BQ4LE39 1312 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-209ENST00000578663 PTPRTO14522 1441 aa12.89□□□□□ -0.35
CDK5RAP3-209ENST00000578663 IQGAP2Q13576 1575 aa12.87□□□□□ -0.35
CDK5RAP3-209ENST00000578663 ARHGEF40Q8TER5 1519 aa12.87□□□□□ -0.35
CDK5RAP3-209ENST00000578663 RAPGEF3O95398 923 aa12.84□□□□□ -0.35
CDK5RAP3-209ENST00000578663 DISP1Q96F81 1524 aa12.83□□□□□ -0.35
CDK5RAP3-209ENST00000578663 SETD1BQ9UPS6 1966 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-209ENST00000578663 UBAP1LF5GYI3 381 aa12.82□□□□□ -0.36
CDK5RAP3-209ENST00000578663 SUPT5HO00267 1087 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-209ENST00000578663 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
CDK5RAP3-209ENST00000578663 UGGT2Q9NYU1 1516 aa12.8□□□□□ -0.36
CDK5RAP3-209ENST00000578663 HSPA1LP34931 641 aa12.8□□□□□ -0.36
CDK5RAP3-209ENST00000578663 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
CDK5RAP3-209ENST00000578663 PHF23Q9BUL5 403 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-209ENST00000578663 RICTORQ6R327 1708 aa12.79□□□□□ -0.36
CDK5RAP3-209ENST00000578663 KIAA0556O60303 1618 aa12.76□□□□□ -0.37
CDK5RAP3-209ENST00000578663 FANCAO15360 1455 aa12.75□□□□□ -0.37
CDK5RAP3-209ENST00000578663 PHLDB1Q86UU1 1377 aa12.75□□□□□ -0.37
CDK5RAP3-209ENST00000578663 ABCA9Q8IUA7 1624 aa12.75□□□□□ -0.37
CDK5RAP3-209ENST00000578663 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-209ENST00000578663 UHRF1BP1Q6BDS2 1440 aa12.73□□□□□ -0.37
CDK5RAP3-209ENST00000578663 POGZQ7Z3K3 1410 aa12.73□□□□□ -0.37
CDK5RAP3-209ENST00000578663 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
CDK5RAP3-209ENST00000578663 RGS17Q9UGC6 210 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-209ENST00000578663 SRCAPQ6ZRS2 3230 aa12.72□□□□□ -0.37
CDK5RAP3-209ENST00000578663 NEO1Q92859 1461 aa12.72□□□□□ -0.37
CDK5RAP3-209ENST00000578663 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-209ENST00000578663 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-209ENST00000578663 NCOA1Q15788 1441 aa12.69□□□□□ -0.38
CDK5RAP3-209ENST00000578663 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
CDK5RAP3-209ENST00000578663 ABCA8O94911 1581 aa12.68□□□□□ -0.38
CDK5RAP3-209ENST00000578663 MLECQ14165 292 aa12.67□□□□□ -0.38
CDK5RAP3-209ENST00000578663 ZMYM4Q5VZL5 1548 aa12.66□□□□□ -0.38
CDK5RAP3-209ENST00000578663 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
CDK5RAP3-209ENST00000578663 AKNAQ7Z591 1439 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms