RNA–Protein interactions for RNA: ENST00000578649.1

UBB-207, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 477 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-207ENST00000578649 JPH4Q96JJ6 628 aa22.38■■□□□ 1.17
UBB-207ENST00000578649 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
UBB-207ENST00000578649 RUSC2Q8N2Y8 1516 aa22.34■■□□□ 1.17
UBB-207ENST00000578649 CUL7Q14999 1698 aa22.29■■□□□ 1.16
UBB-207ENST00000578649 KIAA0586Q9BVV6 1533 aa22.26■■□□□ 1.15
UBB-207ENST00000578649 CARMIL1Q5VZK9 1371 aa22.24■■□□□ 1.15
UBB-207ENST00000578649 ADCY10Q96PN6 1610 aa22.09■■□□□ 1.13
UBB-207ENST00000578649 NPM1P06748 294 aaKnown RBP eCLIP22.08■■□□□ 1.13
UBB-207ENST00000578649 KIF13AQ9H1H9 1805 aa22.05■■□□□ 1.12
UBB-207ENST00000578649 IQGAP2Q13576 1575 aa22.04■■□□□ 1.12
UBB-207ENST00000578649 RAPGEF2Q9Y4G8 1499 aa22.04■■□□□ 1.12
UBB-207ENST00000578649 PTPRGP23470 1445 aa22.04■■□□□ 1.12
UBB-207ENST00000578649 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
UBB-207ENST00000578649 MAPKBP1O60336 1514 aa22.02■■□□□ 1.12
UBB-207ENST00000578649 CARMIL2Q6F5E8 1435 aa22.02■■□□□ 1.12
UBB-207ENST00000578649 TNIKQ9UKE5 1360 aa22■■□□□ 1.11
UBB-207ENST00000578649 FAM69CQ0P6D2 419 aa22■■□□□ 1.11
UBB-207ENST00000578649 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
UBB-207ENST00000578649 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
UBB-207ENST00000578649 DIP2BQ9P265 1576 aa21.94■■□□□ 1.1
UBB-207ENST00000578649 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
UBB-207ENST00000578649 ABCC2Q92887 1545 aa21.89■■□□□ 1.09
UBB-207ENST00000578649 UACAQ9BZF9 1416 aa21.87■■□□□ 1.09
UBB-207ENST00000578649 UHRF1BP1LA0JNW5 1464 aa21.86■■□□□ 1.09
UBB-207ENST00000578649 PRXQ9BXM0 1461 aa21.85■■□□□ 1.09
UBB-207ENST00000578649 KIAA0556O60303 1618 aa21.84■■□□□ 1.09
UBB-207ENST00000578649 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
UBB-207ENST00000578649 ASXL2Q76L83 1435 aa21.81■■□□□ 1.08
UBB-207ENST00000578649 PLB1Q6P1J6 1458 aa21.77■■□□□ 1.08
UBB-207ENST00000578649 KDM5BQ9UGL1 1544 aa21.77■■□□□ 1.08
UBB-207ENST00000578649 TSPOAP1O95153 1857 aa21.77■■□□□ 1.08
UBB-207ENST00000578649 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
UBB-207ENST00000578649 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
UBB-207ENST00000578649 GLI2P10070 1586 aa21.71■■□□□ 1.07
UBB-207ENST00000578649 KDM6BO15054 1643 aa21.71■■□□□ 1.07
UBB-207ENST00000578649 ZCCHC11Q5TAX3 1644 aaKnown RBP21.71■■□□□ 1.07
UBB-207ENST00000578649 EPRSP07814 1512 aaKnown RBP21.68■■□□□ 1.06
UBB-207ENST00000578649 PPRC1Q5VV67 1664 aaKnown RBP21.66■■□□□ 1.06
UBB-207ENST00000578649 ABCA8O94911 1581 aa21.65■■□□□ 1.06
UBB-207ENST00000578649 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
UBB-207ENST00000578649 WDR7Q9Y4E6 1490 aa21.61■■□□□ 1.05
UBB-207ENST00000578649 EEA1Q15075 1411 aa21.61■■□□□ 1.05
UBB-207ENST00000578649 MAP3K4Q9Y6R4 1608 aa21.6■■□□□ 1.05
UBB-207ENST00000578649 FAM9AQ8IZU1 332 aaPredicted RBP21.59■■□□□ 1.05
UBB-207ENST00000578649 COL17A1Q9UMD9 1497 aaPredicted RBP21.54■■□□□ 1.04
UBB-207ENST00000578649 KCNH8Q96L42 1107 aa21.54■■□□□ 1.04
UBB-207ENST00000578649 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
UBB-207ENST00000578649 ARID3CA6NKF2 412 aa21.53■■□□□ 1.04
UBB-207ENST00000578649 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.03
UBB-207ENST00000578649 RANGAP1P46060 587 aaPredicted RBP21.51■■□□□ 1.03
UBB-207ENST00000578649 KDM4FA0A1W2PPD8 638 aa21.5■■□□□ 1.03
UBB-207ENST00000578649 ATP10BO94823 1461 aa21.49■■□□□ 1.03
UBB-207ENST00000578649 CD109Q6YHK3 1445 aa21.47■■□□□ 1.03
UBB-207ENST00000578649 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
UBB-207ENST00000578649 CFAP43Q8NDM7 1665 aa21.44■■□□□ 1.02
UBB-207ENST00000578649 MAGI3Q5TCQ9 1506 aa21.44■■□□□ 1.02
UBB-207ENST00000578649 KIF21BO75037 1637 aa21.44■■□□□ 1.02
UBB-207ENST00000578649 FHOD3Q2V2M9 1422 aa21.43■■□□□ 1.02
UBB-207ENST00000578649 RAPGEF6Q8TEU7 1601 aa21.43■■□□□ 1.02
UBB-207ENST00000578649 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
UBB-207ENST00000578649 NUP153P49790 1475 aaKnown RBP21.38■■□□□ 1.01
UBB-207ENST00000578649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
UBB-207ENST00000578649 HNRNPUL2Q1KMD3 747 aaKnown RBP21.37■■□□□ 1.01
UBB-207ENST00000578649 EFCAB5A4FU69 1503 aa21.33■■□□□ 1
UBB-207ENST00000578649 ABCA9Q8IUA7 1624 aa21.32■■□□□ 1
UBB-207ENST00000578649 ADGRL1O94910 1474 aa21.32■■□□□ 1
UBB-207ENST00000578649 UBTFP17480 764 aaKnown RBP21.31■■□□□ 1
UBB-207ENST00000578649 ARAP3Q8WWN8 1544 aa21.27■■□□□ 1
UBB-207ENST00000578649 PLEKHD1A6NEE1 506 aa21.25■□□□□ 0.99
UBB-207ENST00000578649 PHLDB1Q86UU1 1377 aa21.22■□□□□ 0.99
UBB-207ENST00000578649 ARHGAP35Q9NRY4 1499 aa21.2■□□□□ 0.98
UBB-207ENST00000578649 RAPGEF3O95398 923 aa21.2■□□□□ 0.98
UBB-207ENST00000578649 NEO1Q92859 1461 aa21.2■□□□□ 0.98
UBB-207ENST00000578649 CDK13Q14004 1512 aaKnown RBP21.19■□□□□ 0.98
UBB-207ENST00000578649 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
UBB-207ENST00000578649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.15■□□□□ 0.982e-65■■■□□ 19
UBB-207ENST00000578649 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
UBB-207ENST00000578649 FRMPD1Q5SYB0 1578 aa21.12■□□□□ 0.97
UBB-207ENST00000578649 TTC37Q6PGP7 1564 aa21.12■□□□□ 0.97
UBB-207ENST00000578649 HECW1Q76N89 1606 aa21.1■□□□□ 0.97
UBB-207ENST00000578649 FANCAO15360 1455 aa21.09■□□□□ 0.97
UBB-207ENST00000578649 AKNAQ7Z591 1439 aa21.09■□□□□ 0.97
UBB-207ENST00000578649 PHF23Q9BUL5 403 aaPredicted RBP21.06■□□□□ 0.96
UBB-207ENST00000578649 DENND4BO75064 1496 aaPredicted RBP21.06■□□□□ 0.96
UBB-207ENST00000578649 CFAP74Q9C0B2 1584 aa21.03■□□□□ 0.96
UBB-207ENST00000578649 CDK11AQ9UQ88 783 aaPredicted RBP21.03■□□□□ 0.96
UBB-207ENST00000578649 PLCH2O75038 1416 aa21.03■□□□□ 0.96
UBB-207ENST00000578649 RICTORQ6R327 1708 aa21.02■□□□□ 0.96
UBB-207ENST00000578649 LRRIQ1Q96JM4 1722 aa20.99■□□□□ 0.95
UBB-207ENST00000578649 HECW2Q9P2P5 1572 aa20.98■□□□□ 0.95
UBB-207ENST00000578649 TROQ12816 1431 aaPredicted RBP20.98■□□□□ 0.95
UBB-207ENST00000578649 KIF14Q15058 1648 aa20.98■□□□□ 0.95
UBB-207ENST00000578649 ARID4BQ4LE39 1312 aaPredicted RBP20.98■□□□□ 0.95
UBB-207ENST00000578649 ADAMTSL3P82987 1691 aa20.97■□□□□ 0.95
UBB-207ENST00000578649 ARHGEF40Q8TER5 1519 aa20.97■□□□□ 0.95
UBB-207ENST00000578649 SCAPERQ9BY12 1400 aa20.96■□□□□ 0.95
UBB-207ENST00000578649 CASKIN1Q8WXD9 1431 aa20.95■□□□□ 0.94
UBB-207ENST00000578649 ZMYM4Q5VZL5 1548 aa20.94■□□□□ 0.94
UBB-207ENST00000578649 PCF11O94913 1555 aaKnown RBP20.94■□□□□ 0.94
UBB-207ENST00000578649 EFCAB2Q5VUJ9 269 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms