RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 ARAP1Q96P48 1450 aa36.03■■■■□ 3.36
LIMD2-205ENST00000578402 SYNJ2O15056 1496 aa36.02■■■■□ 3.36
LIMD2-205ENST00000578402 RANGAP1P46060 587 aaPredicted RBP36■■■■□ 3.35
LIMD2-205ENST00000578402 GRIN2AQ12879 1464 aa35.99■■■■□ 3.35
LIMD2-205ENST00000578402 EFCAB5A4FU69 1503 aa35.98■■■■□ 3.35
LIMD2-205ENST00000578402 IQGAP2Q13576 1575 aa35.87■■■■□ 3.33
LIMD2-205ENST00000578402 CHMP7Q8WUX9 453 aaPredicted RBP35.84■■■■□ 3.33
LIMD2-205ENST00000578402 SAMD9Q5K651 1589 aa35.84■■■■□ 3.33
LIMD2-205ENST00000578402 KIAA0586Q9BVV6 1533 aa35.82■■■■□ 3.33
LIMD2-205ENST00000578402 NUP160Q12769 1436 aa35.76■■■■□ 3.32
LIMD2-205ENST00000578402 CEP170Q5SW79 1584 aa35.74■■■■□ 3.31
LIMD2-205ENST00000578402 UGGT2Q9NYU1 1516 aa35.73■■■■□ 3.31
LIMD2-205ENST00000578402 TRIM26Q12899 539 aaPredicted RBP35.67■■■■□ 3.3
LIMD2-205ENST00000578402 FHOD3Q2V2M9 1422 aa35.67■■■■□ 3.3
LIMD2-205ENST00000578402 FBLN2P98095 1184 aa35.67■■■■□ 3.3
LIMD2-205ENST00000578402 APLP2Q06481 763 aa35.63■■■■□ 3.29
LIMD2-205ENST00000578402 FMN1Q68DA7 1419 aa35.62■■■■□ 3.29
LIMD2-205ENST00000578402 CHD1O14646 1710 aa35.61■■■■□ 3.29
LIMD2-205ENST00000578402 P3H3Q8IVL6 736 aa35.58■■■■□ 3.29
LIMD2-205ENST00000578402 MAP3K1Q13233 1512 aa35.54■■■■□ 3.28
LIMD2-205ENST00000578402 FYCO1Q9BQS8 1478 aa35.54■■■■□ 3.28
LIMD2-205ENST00000578402 PCF11O94913 1555 aaKnown RBP35.53■■■■□ 3.28
LIMD2-205ENST00000578402 CASKIN1Q8WXD9 1431 aa35.53■■■■□ 3.28
LIMD2-205ENST00000578402 PPARGC1BQ86YN6 1023 aaKnown RBP35.52■■■■□ 3.28
LIMD2-205ENST00000578402 KIAA0556O60303 1618 aa35.51■■■■□ 3.27
LIMD2-205ENST00000578402 PCGF6Q9BYE7 350 aa35.5■■■■□ 3.27
LIMD2-205ENST00000578402 DISP1Q96F81 1524 aa35.5■■■■□ 3.27
LIMD2-205ENST00000578402 TIAM1Q13009 1591 aa35.42■■■■□ 3.26
LIMD2-205ENST00000578402 JPH4Q96JJ6 628 aa35.39■■■■□ 3.26
LIMD2-205ENST00000578402 CFAP43Q8NDM7 1665 aa35.38■■■■□ 3.25
LIMD2-205ENST00000578402 CARMIL2Q6F5E8 1435 aa35.38■■■■□ 3.25
LIMD2-205ENST00000578402 SHROOM2Q13796 1616 aa35.31■■■■□ 3.24
LIMD2-205ENST00000578402 HECW1Q76N89 1606 aa35.27■■■■□ 3.24
LIMD2-205ENST00000578402 CLASP1Q7Z460 1538 aa35.26■■■■□ 3.24
LIMD2-205ENST00000578402 KANK4Q5T7N3 995 aaPredicted RBP35.26■■■■□ 3.23
LIMD2-205ENST00000578402 TTBK1Q5TCY1 1321 aaPredicted RBP35.25■■■■□ 3.23
LIMD2-205ENST00000578402 LRRC9Q6ZRR7 1453 aa35.24■■■■□ 3.23
LIMD2-205ENST00000578402 CCDC18Q5T9S5 1454 aa35.22■■■■□ 3.23
LIMD2-205ENST00000578402 PRG4Q92954 1404 aaPredicted RBP35.2■■■■□ 3.22
LIMD2-205ENST00000578402 ATP1B4Q9UN42 357 aaPredicted RBP35.19■■■■□ 3.22
LIMD2-205ENST00000578402 LRRIQ1Q96JM4 1722 aa35.18■■■■□ 3.22
LIMD2-205ENST00000578402 RAPGEF6Q8TEU7 1601 aa35.15■■■■□ 3.22
LIMD2-205ENST00000578402 OSCARQ8IYS5 282 aa35.11■■■■□ 3.21
LIMD2-205ENST00000578402 EPRSP07814 1512 aaKnown RBP35.09■■■■□ 3.21
LIMD2-205ENST00000578402 NUP153P49790 1475 aaKnown RBP35.04■■■■□ 3.2
LIMD2-205ENST00000578402 EHBP1L1Q8N3D4 1523 aa35.01■■■■□ 3.2
LIMD2-205ENST00000578402 ABCA8O94911 1581 aa35.01■■■■□ 3.2
LIMD2-205ENST00000578402 PLB1Q6P1J6 1458 aa34.99■■■■□ 3.19
LIMD2-205ENST00000578402 MTUS2Q5JR59 1369 aa34.99■■■■□ 3.19
LIMD2-205ENST00000578402 PTPRGP23470 1445 aa34.98■■■■□ 3.19
LIMD2-205ENST00000578402 RRBP1Q9P2E9 1410 aaKnown RBP34.98■■■■□ 3.19
LIMD2-205ENST00000578402 CDK13Q14004 1512 aaKnown RBP34.94■■■■□ 3.18
LIMD2-205ENST00000578402 ERCC6L2Q5T890 1561 aa34.92■■■■□ 3.18
LIMD2-205ENST00000578402 SUPT6HQ7KZ85 1726 aaKnown RBP34.89■■■■□ 3.18
LIMD2-205ENST00000578402 MAGI3Q5TCQ9 1506 aa34.89■■■■□ 3.18
LIMD2-205ENST00000578402 PHLDB1Q86UU1 1377 aa34.86■■■■□ 3.17
LIMD2-205ENST00000578402 CCNB3Q8WWL7 1395 aa34.83■■■■□ 3.17
LIMD2-205ENST00000578402 ARHGEF11O15085 1522 aa34.82■■■■□ 3.17
LIMD2-205ENST00000578402 UACAQ9BZF9 1416 aa34.81■■■■□ 3.16
LIMD2-205ENST00000578402 CDK11AQ9UQ88 783 aaPredicted RBP34.81■■■■□ 3.16
LIMD2-205ENST00000578402 NCOA2Q15596 1464 aa34.81■■■■□ 3.16
LIMD2-205ENST00000578402 ABCC2Q92887 1545 aa34.73■■■■□ 3.15
LIMD2-205ENST00000578402 ATP10BO94823 1461 aa34.73■■■■□ 3.15
LIMD2-205ENST00000578402 ARID3CA6NKF2 412 aa34.71■■■■□ 3.15
LIMD2-205ENST00000578402 TROQ12816 1431 aaPredicted RBP34.71■■■■□ 3.15
LIMD2-205ENST00000578402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.7■■■■□ 3.15
LIMD2-205ENST00000578402 UHRF1BP1LA0JNW5 1464 aa34.7■■■■□ 3.14
LIMD2-205ENST00000578402 MYOM3Q5VTT5 1437 aa34.69■■■■□ 3.14
LIMD2-205ENST00000578402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.68■■■■□ 3.14
LIMD2-205ENST00000578402 HNRNPUL2Q1KMD3 747 aaKnown RBP34.68■■■■□ 3.14
LIMD2-205ENST00000578402 FGD6Q6ZV73 1430 aa34.67■■■■□ 3.14
LIMD2-205ENST00000578402 ADCY10Q96PN6 1610 aa34.66■■■■□ 3.14
LIMD2-205ENST00000578402 RIMBP3CA6NJZ7 1639 aa34.62■■■■□ 3.13
LIMD2-205ENST00000578402 RIMBP3BA6NNM3 1639 aa34.62■■■■□ 3.13
LIMD2-205ENST00000578402 RIMBP3Q9UFD9 1639 aa34.62■■■■□ 3.13
LIMD2-205ENST00000578402 PLEKHD1A6NEE1 506 aa34.56■■■■□ 3.12
LIMD2-205ENST00000578402 MIA2Q96PC5 1412 aa34.55■■■■□ 3.12
LIMD2-205ENST00000578402 KDM5BQ9UGL1 1544 aa34.53■■■■□ 3.12
LIMD2-205ENST00000578402 KIF14Q15058 1648 aa34.52■■■■□ 3.12
LIMD2-205ENST00000578402 TCOF1Q13428 1488 aaKnown RBP34.5■■■■□ 3.11
LIMD2-205ENST00000578402 PTPN23Q9H3S7 1636 aa34.5■■■■□ 3.11
LIMD2-205ENST00000578402 FAM50AQ14320 339 aaKnown RBP34.48■■■■□ 3.11
LIMD2-205ENST00000578402 HRCP23327 699 aa34.46■■■■□ 3.11
LIMD2-205ENST00000578402 ZCCHC11Q5TAX3 1644 aaKnown RBP34.46■■■■□ 3.11
LIMD2-205ENST00000578402 ITSN2Q9NZM3 1697 aa34.46■■■■□ 3.11
LIMD2-205ENST00000578402 ABCC10Q5T3U5 1492 aa34.42■■■■□ 3.1
LIMD2-205ENST00000578402 GPATCH8Q9UKJ3 1502 aaKnown RBP34.37■■■■□ 3.09
LIMD2-205ENST00000578402 ITGAEP38570 1179 aa34.32■■■■□ 3.08
LIMD2-205ENST00000578402 CDC42BPAQ5VT25 1732 aa34.3■■■■□ 3.08
LIMD2-205ENST00000578402 CYB5RLQ6IPT4 315 aa34.29■■■■□ 3.08
LIMD2-205ENST00000578402 ZEB1P37275 1124 aaPredicted RBP34.25■■■■□ 3.07
LIMD2-205ENST00000578402 CFDP1Q9UEE9 299 aaPredicted RBP34.24■■■■□ 3.07
LIMD2-205ENST00000578402 CCER1Q8TC90 406 aaPredicted RBP34.22■■■■□ 3.07
LIMD2-205ENST00000578402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.22■■■■□ 3.07
LIMD2-205ENST00000578402 PREX2Q70Z35 1606 aa34.2■■■■□ 3.07
LIMD2-205ENST00000578402 CAMSAP2Q08AD1 1489 aa34.2■■■■□ 3.07
LIMD2-205ENST00000578402 PTPRKQ15262 1439 aa34.19■■■■□ 3.06
LIMD2-205ENST00000578402 SETD5Q9C0A6 1442 aa34.19■■■■□ 3.06
LIMD2-205ENST00000578402 DNMT1P26358 1616 aaKnown RBP34.19■■■■□ 3.06
LIMD2-205ENST00000578402 WDR7Q9Y4E6 1490 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms