RNA–Protein interactions for RNA: ENST00000578386.5

SMURF2-203, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene SMURF2, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-203ENST00000578386 ERCC6Q03468 1493 aa15.87■□□□□ 0.13
SMURF2-203ENST00000578386 PBRM1Q86U86 1689 aa15.87■□□□□ 0.13
SMURF2-203ENST00000578386 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
SMURF2-203ENST00000578386 CTTNBP2Q8WZ74 1663 aa15.84■□□□□ 0.13
SMURF2-203ENST00000578386 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.13
SMURF2-203ENST00000578386 IFT140Q96RY7 1462 aa15.81■□□□□ 0.12
SMURF2-203ENST00000578386 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
SMURF2-203ENST00000578386 FHOD3Q2V2M9 1422 aa15.78■□□□□ 0.12
SMURF2-203ENST00000578386 ADAMTS12P58397 1594 aa15.77■□□□□ 0.12
SMURF2-203ENST00000578386 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
SMURF2-203ENST00000578386 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
SMURF2-203ENST00000578386 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
SMURF2-203ENST00000578386 FBLN2P98095 1184 aa15.7■□□□□ 0.1
SMURF2-203ENST00000578386 EFCAB5A4FU69 1503 aa15.7■□□□□ 0.1
SMURF2-203ENST00000578386 ITGAEP38570 1179 aa15.7■□□□□ 0.1
SMURF2-203ENST00000578386 SAMD9Q5K651 1589 aa15.68■□□□□ 0.1
SMURF2-203ENST00000578386 SNAPC4Q5SXM2 1469 aa15.67■□□□□ 0.1
SMURF2-203ENST00000578386 PCF11O94913 1555 aaKnown RBP15.67■□□□□ 0.1
SMURF2-203ENST00000578386 ARID3CA6NKF2 412 aa15.66■□□□□ 0.1
SMURF2-203ENST00000578386 ZEB1P37275 1124 aaPredicted RBP15.63■□□□□ 0.09
SMURF2-203ENST00000578386 TIAM1Q13009 1591 aa15.63■□□□□ 0.09
SMURF2-203ENST00000578386 IQGAP2Q13576 1575 aa15.61■□□□□ 0.09
SMURF2-203ENST00000578386 MAP3K1Q13233 1512 aa15.6■□□□□ 0.09
SMURF2-203ENST00000578386 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
SMURF2-203ENST00000578386 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
SMURF2-203ENST00000578386 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
SMURF2-203ENST00000578386 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
SMURF2-203ENST00000578386 LRRIQ1Q96JM4 1722 aa15.58■□□□□ 0.08
SMURF2-203ENST00000578386 FYCO1Q9BQS8 1478 aa15.57■□□□□ 0.08
SMURF2-203ENST00000578386 CASKIN1Q8WXD9 1431 aa15.57■□□□□ 0.08
SMURF2-203ENST00000578386 SYNJ2O15056 1496 aa15.55■□□□□ 0.08
SMURF2-203ENST00000578386 FAM50AQ14320 339 aaKnown RBP15.54■□□□□ 0.08
SMURF2-203ENST00000578386 LRRC9Q6ZRR7 1453 aa15.54■□□□□ 0.08
SMURF2-203ENST00000578386 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
SMURF2-203ENST00000578386 CEP170Q5SW79 1584 aa15.54■□□□□ 0.08
SMURF2-203ENST00000578386 PHLDB1Q86UU1 1377 aa15.53■□□□□ 0.08
SMURF2-203ENST00000578386 UGGT2Q9NYU1 1516 aa15.53■□□□□ 0.08
SMURF2-203ENST00000578386 KIAA0586Q9BVV6 1533 aa15.52■□□□□ 0.08
SMURF2-203ENST00000578386 CCNB3Q8WWL7 1395 aa15.52■□□□□ 0.07
SMURF2-203ENST00000578386 RRBP1Q9P2E9 1410 aaKnown RBP15.5■□□□□ 0.07
SMURF2-203ENST00000578386 DISP1Q96F81 1524 aa15.49■□□□□ 0.07
SMURF2-203ENST00000578386 KIAA0556O60303 1618 aa15.47■□□□□ 0.07
SMURF2-203ENST00000578386 NUP160Q12769 1436 aa15.46■□□□□ 0.07
SMURF2-203ENST00000578386 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
SMURF2-203ENST00000578386 CHD1O14646 1710 aa15.41■□□□□ 0.06
SMURF2-203ENST00000578386 MAGI3Q5TCQ9 1506 aa15.4■□□□□ 0.06
SMURF2-203ENST00000578386 CDK13Q14004 1512 aaKnown RBP15.4■□□□□ 0.06
SMURF2-203ENST00000578386 JPH4Q96JJ6 628 aa15.4■□□□□ 0.06
SMURF2-203ENST00000578386 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
SMURF2-203ENST00000578386 EPRSP07814 1512 aaKnown RBP15.36■□□□□ 0.05
SMURF2-203ENST00000578386 CCDC18Q5T9S5 1454 aa15.35■□□□□ 0.05
SMURF2-203ENST00000578386 NCOA2Q15596 1464 aa15.33■□□□□ 0.05
SMURF2-203ENST00000578386 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.05
SMURF2-203ENST00000578386 RAPGEF6Q8TEU7 1601 aa15.33■□□□□ 0.04
SMURF2-203ENST00000578386 EHBP1L1Q8N3D4 1523 aa15.33■□□□□ 0.04
SMURF2-203ENST00000578386 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.04
SMURF2-203ENST00000578386 NUP153P49790 1475 aaKnown RBP15.32■□□□□ 0.04
SMURF2-203ENST00000578386 SUPT6HQ7KZ85 1726 aaKnown RBP15.32■□□□□ 0.04
SMURF2-203ENST00000578386 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
SMURF2-203ENST00000578386 PLB1Q6P1J6 1458 aa15.31■□□□□ 0.04
SMURF2-203ENST00000578386 FGD6Q6ZV73 1430 aa15.31■□□□□ 0.04
SMURF2-203ENST00000578386 CHIC2Q9UKJ5 165 aa15.3■□□□□ 0.04
SMURF2-203ENST00000578386 CARMIL2Q6F5E8 1435 aa15.27■□□□□ 0.03
SMURF2-203ENST00000578386 SHROOM2Q13796 1616 aa15.26■□□□□ 0.03
SMURF2-203ENST00000578386 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
SMURF2-203ENST00000578386 MYOM3Q5VTT5 1437 aa15.25■□□□□ 0.03
SMURF2-203ENST00000578386 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
SMURF2-203ENST00000578386 PRG4Q92954 1404 aaPredicted RBP15.24■□□□□ 0.03
SMURF2-203ENST00000578386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMURF2-203ENST00000578386 RRP7BPQ9NSQ0 103 aa15.23■□□□□ 0.03
SMURF2-203ENST00000578386 ZNF644Q9H582 1327 aaPredicted RBP15.23■□□□□ 0.03
SMURF2-203ENST00000578386 ABCA8O94911 1581 aa15.23■□□□□ 0.03
SMURF2-203ENST00000578386 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
SMURF2-203ENST00000578386 NEUROD1Q13562 356 aa15.21■□□□□ 0.02
SMURF2-203ENST00000578386 SIN3AQ96ST3 1273 aa15.21■□□□□ 0.02
SMURF2-203ENST00000578386 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.02
SMURF2-203ENST00000578386 ZNF777Q9ULD5 760 aaPredicted RBP15.2■□□□□ 0.02
SMURF2-203ENST00000578386 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
SMURF2-203ENST00000578386 CDK11AQ9UQ88 783 aaPredicted RBP15.17■□□□□ 0.02
SMURF2-203ENST00000578386 TCOF1Q13428 1488 aaKnown RBP15.16■□□□□ 0.02
SMURF2-203ENST00000578386 PTPRGP23470 1445 aa15.15■□□□□ 0.02
SMURF2-203ENST00000578386 KIF14Q15058 1648 aa15.15■□□□□ 0.02
SMURF2-203ENST00000578386 ZNF316A6NFI3 1004 aaPredicted RBP15.14■□□□□ 0.01
SMURF2-203ENST00000578386 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
SMURF2-203ENST00000578386 ATP10BO94823 1461 aa15.14■□□□□ 0.01
SMURF2-203ENST00000578386 DIEXFQ68CQ4 756 aaKnown RBP15.14■□□□□ 0.01
SMURF2-203ENST00000578386 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
SMURF2-203ENST00000578386 MAPKBP1O60336 1514 aa15.13■□□□□ 0.01
SMURF2-203ENST00000578386 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
SMURF2-203ENST00000578386 CFDP1Q9UEE9 299 aaPredicted RBP15.11■□□□□ 0.01
SMURF2-203ENST00000578386 MIA2Q96PC5 1412 aa15.11■□□□□ 0.01
SMURF2-203ENST00000578386 TRIM52Q96A61 297 aa15.09■□□□□ 0.01
SMURF2-203ENST00000578386 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
SMURF2-203ENST00000578386 NAIPQ13075 1403 aa15.09■□□□□ 0.01
SMURF2-203ENST00000578386 HFM1A2PYH4 1435 aa15.07■□□□□ 0
SMURF2-203ENST00000578386 KCNH8Q96L42 1107 aa15.07■□□□□ 0
SMURF2-203ENST00000578386 UACAQ9BZF9 1416 aa15.06■□□□□ 0
SMURF2-203ENST00000578386 GPATCH8Q9UKJ3 1502 aaKnown RBP15.05■□□□□ 0
SMURF2-203ENST00000578386 FOXD1Q16676 465 aa15.05■□□□□ -0
SMURF2-203ENST00000578386 CDC42BPAQ5VT25 1732 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms