RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 JPH4Q96JJ6 628 aa22.6■■□□□ 1.21
LINC01543-201ENST00000578367 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
LINC01543-201ENST00000578367 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.21
LINC01543-201ENST00000578367 IQGAP2Q13576 1575 aa22.57■■□□□ 1.2
LINC01543-201ENST00000578367 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
LINC01543-201ENST00000578367 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
LINC01543-201ENST00000578367 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.19
LINC01543-201ENST00000578367 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
LINC01543-201ENST00000578367 CARMIL2Q6F5E8 1435 aa22.48■■□□□ 1.19
LINC01543-201ENST00000578367 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
LINC01543-201ENST00000578367 ARHGEF11O15085 1522 aa22.43■■□□□ 1.18
LINC01543-201ENST00000578367 EHMT2Q96KQ7 1210 aa22.4■■□□□ 1.18
LINC01543-201ENST00000578367 DISP1Q96F81 1524 aa22.39■■□□□ 1.17
LINC01543-201ENST00000578367 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
LINC01543-201ENST00000578367 EFCAB5A4FU69 1503 aa22.37■■□□□ 1.17
LINC01543-201ENST00000578367 KIAA0556O60303 1618 aa22.32■■□□□ 1.16
LINC01543-201ENST00000578367 SAMD9Q5K651 1589 aa22.32■■□□□ 1.16
LINC01543-201ENST00000578367 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
LINC01543-201ENST00000578367 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
LINC01543-201ENST00000578367 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
LINC01543-201ENST00000578367 PTPRGP23470 1445 aa22.31■■□□□ 1.16
LINC01543-201ENST00000578367 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
LINC01543-201ENST00000578367 CLIP1P30622 1438 aa22.29■■□□□ 1.16
LINC01543-201ENST00000578367 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
LINC01543-201ENST00000578367 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
LINC01543-201ENST00000578367 ARHGAP35Q9NRY4 1499 aa22.26■■□□□ 1.15
LINC01543-201ENST00000578367 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
LINC01543-201ENST00000578367 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
LINC01543-201ENST00000578367 P3H3Q8IVL6 736 aa22.2■■□□□ 1.14
LINC01543-201ENST00000578367 FMN1Q68DA7 1419 aa22.2■■□□□ 1.14
LINC01543-201ENST00000578367 FHOD3Q2V2M9 1422 aa22.19■■□□□ 1.14
LINC01543-201ENST00000578367 UACAQ9BZF9 1416 aa22.16■■□□□ 1.14
LINC01543-201ENST00000578367 UHRF1BP1LA0JNW5 1464 aa22.15■■□□□ 1.14
LINC01543-201ENST00000578367 ABCA8O94911 1581 aa22.08■■□□□ 1.13
LINC01543-201ENST00000578367 ABCC2Q92887 1545 aa22.08■■□□□ 1.13
LINC01543-201ENST00000578367 TTBK1Q5TCY1 1321 aaPredicted RBP22.07■■□□□ 1.12
LINC01543-201ENST00000578367 PLB1Q6P1J6 1458 aa22.07■■□□□ 1.12
LINC01543-201ENST00000578367 NPM1P06748 294 aaKnown RBP eCLIP22.05■■□□□ 1.12
LINC01543-201ENST00000578367 CASKIN1Q8WXD9 1431 aa22.03■■□□□ 1.12
LINC01543-201ENST00000578367 KDM5BQ9UGL1 1544 aa22.01■■□□□ 1.11
LINC01543-201ENST00000578367 VPS8Q8N3P4 1428 aa22.01■■□□□ 1.11
LINC01543-201ENST00000578367 RAPGEF6Q8TEU7 1601 aa22■■□□□ 1.11
LINC01543-201ENST00000578367 ADCY10Q96PN6 1610 aa22■■□□□ 1.11
LINC01543-201ENST00000578367 FYCO1Q9BQS8 1478 aa21.99■■□□□ 1.11
LINC01543-201ENST00000578367 NUP153P49790 1475 aaKnown RBP21.96■■□□□ 1.11
LINC01543-201ENST00000578367 HECW1Q76N89 1606 aa21.95■■□□□ 1.1
LINC01543-201ENST00000578367 ATP10BO94823 1461 aa21.92■■□□□ 1.1
LINC01543-201ENST00000578367 CCDC18Q5T9S5 1454 aa21.92■■□□□ 1.1
LINC01543-201ENST00000578367 MAPKBP1O60336 1514 aa21.9■■□□□ 1.1
LINC01543-201ENST00000578367 CDK11AQ9UQ88 783 aaPredicted RBP21.9■■□□□ 1.1
LINC01543-201ENST00000578367 EPRSP07814 1512 aaKnown RBP21.89■■□□□ 1.09
LINC01543-201ENST00000578367 PCF11O94913 1555 aaKnown RBP21.88■■□□□ 1.09
LINC01543-201ENST00000578367 ATP1B4Q9UN42 357 aaPredicted RBP21.88■■□□□ 1.09
LINC01543-201ENST00000578367 PLEKHD1A6NEE1 506 aa21.85■■□□□ 1.09
LINC01543-201ENST00000578367 ZCCHC11Q5TAX3 1644 aaKnown RBP21.84■■□□□ 1.09
LINC01543-201ENST00000578367 ASXL2Q76L83 1435 aa21.83■■□□□ 1.09
LINC01543-201ENST00000578367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.09
LINC01543-201ENST00000578367 HNRNPUL2Q1KMD3 747 aaKnown RBP21.83■■□□□ 1.09
LINC01543-201ENST00000578367 MAP3K1Q13233 1512 aa21.83■■□□□ 1.09
LINC01543-201ENST00000578367 WDR7Q9Y4E6 1490 aa21.81■■□□□ 1.08
LINC01543-201ENST00000578367 APLP2Q06481 763 aa21.8■■□□□ 1.08
LINC01543-201ENST00000578367 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
LINC01543-201ENST00000578367 CDK13Q14004 1512 aaKnown RBP21.78■■□□□ 1.08
LINC01543-201ENST00000578367 ABCC10Q5T3U5 1492 aa21.75■■□□□ 1.07
LINC01543-201ENST00000578367 TROQ12816 1431 aaPredicted RBP21.74■■□□□ 1.07
LINC01543-201ENST00000578367 MTUS2Q5JR59 1369 aa21.71■■□□□ 1.07
LINC01543-201ENST00000578367 TIAM1Q13009 1591 aa21.7■■□□□ 1.06
LINC01543-201ENST00000578367 GLI2P10070 1586 aa21.69■■□□□ 1.06
LINC01543-201ENST00000578367 FAM69CQ0P6D2 419 aa21.66■■□□□ 1.06
LINC01543-201ENST00000578367 KCNH8Q96L42 1107 aa21.66■■□□□ 1.06
LINC01543-201ENST00000578367 LRRIQ1Q96JM4 1722 aa21.66■■□□□ 1.06
LINC01543-201ENST00000578367 CFAP43Q8NDM7 1665 aa21.66■■□□□ 1.06
LINC01543-201ENST00000578367 EHBP1L1Q8N3D4 1523 aa21.65■■□□□ 1.06
LINC01543-201ENST00000578367 LRRC9Q6ZRR7 1453 aa21.65■■□□□ 1.06
LINC01543-201ENST00000578367 DIP2BQ9P265 1576 aa21.64■■□□□ 1.05
LINC01543-201ENST00000578367 MAGI3Q5TCQ9 1506 aa21.61■■□□□ 1.05
LINC01543-201ENST00000578367 TRHP20396 242 aaPredicted RBP21.61■■□□□ 1.05
LINC01543-201ENST00000578367 KIF14Q15058 1648 aa21.59■■□□□ 1.05
LINC01543-201ENST00000578367 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
LINC01543-201ENST00000578367 ABCA9Q8IUA7 1624 aa21.58■■□□□ 1.04
LINC01543-201ENST00000578367 CD109Q6YHK3 1445 aa21.57■■□□□ 1.04
LINC01543-201ENST00000578367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.55■■□□□ 1.04
LINC01543-201ENST00000578367 ARAP3Q8WWN8 1544 aa21.53■■□□□ 1.04
LINC01543-201ENST00000578367 PHLDB1Q86UU1 1377 aa21.52■■□□□ 1.04
LINC01543-201ENST00000578367 PLCH2O75038 1416 aa21.52■■□□□ 1.04
LINC01543-201ENST00000578367 NCOA2Q15596 1464 aa21.51■■□□□ 1.03
LINC01543-201ENST00000578367 TEX14Q8IWB6 1497 aa21.51■■□□□ 1.03
LINC01543-201ENST00000578367 MAP3K4Q9Y6R4 1608 aa21.51■■□□□ 1.03
LINC01543-201ENST00000578367 CCNB3Q8WWL7 1395 aa21.5■■□□□ 1.03
LINC01543-201ENST00000578367 SUPT6HQ7KZ85 1726 aaKnown RBP21.49■■□□□ 1.03
LINC01543-201ENST00000578367 KIF13AQ9H1H9 1805 aa21.48■■□□□ 1.03
LINC01543-201ENST00000578367 EFCAB2Q5VUJ9 269 aa21.47■■□□□ 1.03
LINC01543-201ENST00000578367 TTC37Q6PGP7 1564 aa21.47■■□□□ 1.03
LINC01543-201ENST00000578367 GPATCH8Q9UKJ3 1502 aaKnown RBP21.46■■□□□ 1.03
LINC01543-201ENST00000578367 NEO1Q92859 1461 aa21.45■■□□□ 1.03
LINC01543-201ENST00000578367 CFDP1Q9UEE9 299 aaPredicted RBP21.43■■□□□ 1.02
LINC01543-201ENST00000578367 MIA2Q96PC5 1412 aa21.43■■□□□ 1.02
LINC01543-201ENST00000578367 MYOM3Q5VTT5 1437 aa21.41■■□□□ 1.02
LINC01543-201ENST00000578367 FANCAO15360 1455 aa21.4■■□□□ 1.02
LINC01543-201ENST00000578367 CFAP74Q9C0B2 1584 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms