RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 JPH4Q96JJ6 628 aa7.99□□□□□ -1.13
PPP4R1-209ENST00000578329 KIF13AQ9H1H9 1805 aa7.99□□□□□ -1.13
PPP4R1-209ENST00000578329 ADCY10Q96PN6 1610 aa7.96□□□□□ -1.13
PPP4R1-209ENST00000578329 KIAA0586Q9BVV6 1533 aa7.96□□□□□ -1.14
PPP4R1-209ENST00000578329 KIF27Q86VH2 1401 aa7.94□□□□□ -1.14
PPP4R1-209ENST00000578329 CUL7Q14999 1698 aa7.92□□□□□ -1.14
PPP4R1-209ENST00000578329 CARMIL1Q5VZK9 1371 aa7.92□□□□□ -1.14
PPP4R1-209ENST00000578329 ABCC10Q5T3U5 1492 aa7.91□□□□□ -1.14
PPP4R1-209ENST00000578329 MAPKBP1O60336 1514 aa7.91□□□□□ -1.14
PPP4R1-209ENST00000578329 DISP1Q96F81 1524 aa7.91□□□□□ -1.14
PPP4R1-209ENST00000578329 DIP2BQ9P265 1576 aa7.91□□□□□ -1.14
PPP4R1-209ENST00000578329 PPRC1Q5VV67 1664 aaKnown RBP7.86□□□□□ -1.15
PPP4R1-209ENST00000578329 IQGAP2Q13576 1575 aa7.86□□□□□ -1.15
PPP4R1-209ENST00000578329 ABCC2Q92887 1545 aa7.85□□□□□ -1.15
PPP4R1-209ENST00000578329 UGGT2Q9NYU1 1516 aa7.85□□□□□ -1.15
PPP4R1-209ENST00000578329 FAM69CQ0P6D2 419 aa7.85□□□□□ -1.15
PPP4R1-209ENST00000578329 PTPRGP23470 1445 aa7.85□□□□□ -1.15
PPP4R1-209ENST00000578329 UHRF1BP1LA0JNW5 1464 aa7.84□□□□□ -1.15
PPP4R1-209ENST00000578329 COL17A1Q9UMD9 1497 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-209ENST00000578329 TNIKQ9UKE5 1360 aa7.84□□□□□ -1.16
PPP4R1-209ENST00000578329 PRXQ9BXM0 1461 aa7.83□□□□□ -1.16
PPP4R1-209ENST00000578329 RAPGEF2Q9Y4G8 1499 aa7.83□□□□□ -1.16
PPP4R1-209ENST00000578329 KIAA0556O60303 1618 aa7.82□□□□□ -1.16
PPP4R1-209ENST00000578329 ASXL2Q76L83 1435 aa7.82□□□□□ -1.16
PPP4R1-209ENST00000578329 KDM5BQ9UGL1 1544 aa7.82□□□□□ -1.16
PPP4R1-209ENST00000578329 TSPOAP1O95153 1857 aa7.81□□□□□ -1.16
PPP4R1-209ENST00000578329 GLI2P10070 1586 aa7.8□□□□□ -1.16
PPP4R1-209ENST00000578329 UACAQ9BZF9 1416 aa7.8□□□□□ -1.16
PPP4R1-209ENST00000578329 KDM4FA0A1W2PPD8 638 aa7.8□□□□□ -1.16
PPP4R1-209ENST00000578329 PLB1Q6P1J6 1458 aa7.8□□□□□ -1.16
PPP4R1-209ENST00000578329 TTBK1Q5TCY1 1321 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-209ENST00000578329 EPRSP07814 1512 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-209ENST00000578329 ZCCHC11Q5TAX3 1644 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-209ENST00000578329 ABCA8O94911 1581 aa7.78□□□□□ -1.16
PPP4R1-209ENST00000578329 MAP3K4Q9Y6R4 1608 aa7.78□□□□□ -1.16
PPP4R1-209ENST00000578329 CARMIL2Q6F5E8 1435 aa7.78□□□□□ -1.16
PPP4R1-209ENST00000578329 CTTNBP2Q8WZ74 1663 aa7.77□□□□□ -1.17
PPP4R1-209ENST00000578329 KDM6BO15054 1643 aa7.77□□□□□ -1.17
PPP4R1-209ENST00000578329 AEBP2Q6ZN18 517 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-209ENST00000578329 NPM1P06748 294 aaKnown RBP eCLIP7.75□□□□□ -1.17
PPP4R1-209ENST00000578329 SAMD9Q5K651 1589 aa7.72□□□□□ -1.17
PPP4R1-209ENST00000578329 WDR7Q9Y4E6 1490 aa7.72□□□□□ -1.17
PPP4R1-209ENST00000578329 ATP10BO94823 1461 aa7.71□□□□□ -1.18
PPP4R1-209ENST00000578329 CSRNP3Q8WYN3 585 aa7.69□□□□□ -1.18
PPP4R1-209ENST00000578329 MAGI3Q5TCQ9 1506 aa7.68□□□□□ -1.18
PPP4R1-209ENST00000578329 P3H3Q8IVL6 736 aa7.68□□□□□ -1.18
PPP4R1-209ENST00000578329 ADGRL1O94910 1474 aa7.68□□□□□ -1.18
PPP4R1-209ENST00000578329 NUP153P49790 1475 aaKnown RBP7.68□□□□□ -1.18
PPP4R1-209ENST00000578329 GOLGA3Q08378 1498 aa7.68□□□□□ -1.18
PPP4R1-209ENST00000578329 CFAP43Q8NDM7 1665 aa7.67□□□□□ -1.18
PPP4R1-209ENST00000578329 ARID3CA6NKF2 412 aa7.66□□□□□ -1.18
PPP4R1-209ENST00000578329 FHOD3Q2V2M9 1422 aa7.65□□□□□ -1.18
PPP4R1-209ENST00000578329 FRMPD1Q5SYB0 1578 aa7.65□□□□□ -1.18
PPP4R1-209ENST00000578329 CD109Q6YHK3 1445 aa7.65□□□□□ -1.18
PPP4R1-209ENST00000578329 ABCA9Q8IUA7 1624 aa7.65□□□□□ -1.18
PPP4R1-209ENST00000578329 RAPGEF6Q8TEU7 1601 aa7.64□□□□□ -1.19
PPP4R1-209ENST00000578329 KCNH8Q96L42 1107 aa7.64□□□□□ -1.19
PPP4R1-209ENST00000578329 ARAP3Q8WWN8 1544 aa7.63□□□□□ -1.19
PPP4R1-209ENST00000578329 TEX14Q8IWB6 1497 aa7.63□□□□□ -1.19
PPP4R1-209ENST00000578329 KIF21BO75037 1637 aa7.63□□□□□ -1.19
PPP4R1-209ENST00000578329 SIGLEC1Q9BZZ2 1709 aa7.62□□□□□ -1.19
PPP4R1-209ENST00000578329 CHIC1Q5VXU3 224 aa7.61□□□□□ -1.19
PPP4R1-209ENST00000578329 FAM9AQ8IZU1 332 aaPredicted RBP7.61□□□□□ -1.19
PPP4R1-209ENST00000578329 EEA1Q15075 1411 aa7.61□□□□□ -1.19
PPP4R1-209ENST00000578329 CDK13Q14004 1512 aaKnown RBP7.59□□□□□ -1.19
PPP4R1-209ENST00000578329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.59□□□□□ -1.19
PPP4R1-209ENST00000578329 ARHGAP35Q9NRY4 1499 aa7.59□□□□□ -1.19
PPP4R1-209ENST00000578329 TTC37Q6PGP7 1564 aa7.59□□□□□ -1.2
PPP4R1-209ENST00000578329 LRRIQ1Q96JM4 1722 aa7.58□□□□□ -1.2
PPP4R1-209ENST00000578329 ADAMTSL3P82987 1691 aa7.58□□□□□ -1.2
PPP4R1-209ENST00000578329 RAPGEF3O95398 923 aa7.58□□□□□ -1.2
PPP4R1-209ENST00000578329 HECW2Q9P2P5 1572 aa7.58□□□□□ -1.2
PPP4R1-209ENST00000578329 RANGAP1P46060 587 aaPredicted RBP7.57□□□□□ -1.2
PPP4R1-209ENST00000578329 RICTORQ6R327 1708 aa7.57□□□□□ -1.2
PPP4R1-209ENST00000578329 EFCAB5A4FU69 1503 aa7.57□□□□□ -1.2
PPP4R1-209ENST00000578329 NEO1Q92859 1461 aa7.56□□□□□ -1.2
PPP4R1-209ENST00000578329 YEATS2Q9ULM3 1422 aa7.54□□□□□ -1.2
PPP4R1-209ENST00000578329 KIF14Q15058 1648 aa7.53□□□□□ -1.2
PPP4R1-209ENST00000578329 BCORL1Q5H9F3 1711 aa7.53□□□□□ -1.2
PPP4R1-209ENST00000578329 EHMT2Q96KQ7 1210 aa7.53□□□□□ -1.2
PPP4R1-209ENST00000578329 AKNAQ7Z591 1439 aa7.52□□□□□ -1.2
PPP4R1-209ENST00000578329 ZMYM4Q5VZL5 1548 aa7.52□□□□□ -1.2
PPP4R1-209ENST00000578329 PTPRMP28827 1452 aa7.52□□□□□ -1.21
PPP4R1-209ENST00000578329 PHLDB1Q86UU1 1377 aa7.52□□□□□ -1.21
PPP4R1-209ENST00000578329 MADDQ8WXG6 1647 aa7.52□□□□□ -1.21
PPP4R1-209ENST00000578329 ARHGEF40Q8TER5 1519 aa7.52□□□□□ -1.21
PPP4R1-209ENST00000578329 FANCAO15360 1455 aa7.51□□□□□ -1.21
PPP4R1-209ENST00000578329 ILDR1Q86SU0 546 aaPredicted RBP7.51□□□□□ -1.21
PPP4R1-209ENST00000578329 PLCH2O75038 1416 aa7.51□□□□□ -1.21
PPP4R1-209ENST00000578329 HECW1Q76N89 1606 aa7.5□□□□□ -1.21
PPP4R1-209ENST00000578329 DENND4BO75064 1496 aaPredicted RBP7.49□□□□□ -1.21
PPP4R1-209ENST00000578329 ARHGEF12Q9NZN5 1544 aa7.49□□□□□ -1.21
PPP4R1-209ENST00000578329 PLEKHD1A6NEE1 506 aa7.49□□□□□ -1.21
PPP4R1-209ENST00000578329 LMTK3Q96Q04 1460 aa7.49□□□□□ -1.21
PPP4R1-209ENST00000578329 PCF11O94913 1555 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-209ENST00000578329 POGZQ7Z3K3 1410 aa7.48□□□□□ -1.21
PPP4R1-209ENST00000578329 CDC42BPBQ9Y5S2 1711 aa7.47□□□□□ -1.21
PPP4R1-209ENST00000578329 TROQ12816 1431 aaPredicted RBP7.47□□□□□ -1.21
PPP4R1-209ENST00000578329 SCAPERQ9BY12 1400 aa7.47□□□□□ -1.21
PPP4R1-209ENST00000578329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms