RNA–Protein interactions for RNA: ENST00000578328.6

IKBKE-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IKBKE, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-201ENST00000578328 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
IKBKE-201ENST00000578328 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
IKBKE-201ENST00000578328 CTTNBP2Q8WZ74 1663 aa20.9■□□□□ 0.94
IKBKE-201ENST00000578328 WDR62O43379 1518 aa20.88■□□□□ 0.93
IKBKE-201ENST00000578328 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
IKBKE-201ENST00000578328 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
IKBKE-201ENST00000578328 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
IKBKE-201ENST00000578328 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.92
IKBKE-201ENST00000578328 IFT140Q96RY7 1462 aa20.83■□□□□ 0.92
IKBKE-201ENST00000578328 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
IKBKE-201ENST00000578328 EFCAB5A4FU69 1503 aa20.8■□□□□ 0.92
IKBKE-201ENST00000578328 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
IKBKE-201ENST00000578328 PCF11O94913 1555 aaKnown RBP20.77■□□□□ 0.92
IKBKE-201ENST00000578328 TIAM1Q13009 1591 aa20.76■□□□□ 0.91
IKBKE-201ENST00000578328 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
IKBKE-201ENST00000578328 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
IKBKE-201ENST00000578328 MAP3K1Q13233 1512 aa20.72■□□□□ 0.91
IKBKE-201ENST00000578328 LRRC9Q6ZRR7 1453 aa20.69■□□□□ 0.9
IKBKE-201ENST00000578328 EIF4G3O43432 1585 aaKnown RBP20.69■□□□□ 0.9
IKBKE-201ENST00000578328 SAMD9Q5K651 1589 aa20.69■□□□□ 0.9
IKBKE-201ENST00000578328 CASKIN1Q8WXD9 1431 aa20.68■□□□□ 0.9
IKBKE-201ENST00000578328 FMN1Q68DA7 1419 aa20.68■□□□□ 0.9
IKBKE-201ENST00000578328 RRBP1Q9P2E9 1410 aaKnown RBP20.68■□□□□ 0.9
IKBKE-201ENST00000578328 FYCO1Q9BQS8 1478 aa20.68■□□□□ 0.9
IKBKE-201ENST00000578328 SNAPC4Q5SXM2 1469 aa20.66■□□□□ 0.9
IKBKE-201ENST00000578328 CFAP43Q8NDM7 1665 aa20.65■□□□□ 0.9
IKBKE-201ENST00000578328 CCNB3Q8WWL7 1395 aa20.64■□□□□ 0.89
IKBKE-201ENST00000578328 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
IKBKE-201ENST00000578328 ITGAEP38570 1179 aa20.61■□□□□ 0.89
IKBKE-201ENST00000578328 NEUROD1Q13562 356 aa20.6■□□□□ 0.89
IKBKE-201ENST00000578328 PELP1Q8IZL8 1130 aaKnown RBP20.6■□□□□ 0.89
IKBKE-201ENST00000578328 PHLDB1Q86UU1 1377 aa20.59■□□□□ 0.89
IKBKE-201ENST00000578328 FBLN2P98095 1184 aa20.56■□□□□ 0.88
IKBKE-201ENST00000578328 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
IKBKE-201ENST00000578328 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
IKBKE-201ENST00000578328 LRRIQ1Q96JM4 1722 aa20.54■□□□□ 0.88
IKBKE-201ENST00000578328 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
IKBKE-201ENST00000578328 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
IKBKE-201ENST00000578328 KIAA0586Q9BVV6 1533 aa20.51■□□□□ 0.87
IKBKE-201ENST00000578328 FAM50AQ14320 339 aaKnown RBP20.51■□□□□ 0.87
IKBKE-201ENST00000578328 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
IKBKE-201ENST00000578328 UGGT2Q9NYU1 1516 aa20.49■□□□□ 0.87
IKBKE-201ENST00000578328 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
IKBKE-201ENST00000578328 DIEXFQ68CQ4 756 aaKnown RBP20.47■□□□□ 0.87
IKBKE-201ENST00000578328 ARID3CA6NKF2 412 aa20.45■□□□□ 0.86
IKBKE-201ENST00000578328 CEP170Q5SW79 1584 aa20.43■□□□□ 0.86
IKBKE-201ENST00000578328 DISP1Q96F81 1524 aa20.43■□□□□ 0.86
IKBKE-201ENST00000578328 KIAA0556O60303 1618 aa20.41■□□□□ 0.86
IKBKE-201ENST00000578328 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
IKBKE-201ENST00000578328 GTF3C3Q9Y5Q9 886 aa20.41■□□□□ 0.86
IKBKE-201ENST00000578328 HECW1Q76N89 1606 aa20.4■□□□□ 0.86
IKBKE-201ENST00000578328 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
IKBKE-201ENST00000578328 EPRSP07814 1512 aaKnown RBP20.38■□□□□ 0.85
IKBKE-201ENST00000578328 MAGI3Q5TCQ9 1506 aa20.38■□□□□ 0.85
IKBKE-201ENST00000578328 NCOA2Q15596 1464 aa20.37■□□□□ 0.85
IKBKE-201ENST00000578328 CDK13Q14004 1512 aaKnown RBP20.36■□□□□ 0.85
IKBKE-201ENST00000578328 FGD6Q6ZV73 1430 aa20.36■□□□□ 0.85
IKBKE-201ENST00000578328 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
IKBKE-201ENST00000578328 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
IKBKE-201ENST00000578328 EHBP1L1Q8N3D4 1523 aa20.35■□□□□ 0.85
IKBKE-201ENST00000578328 NUP160Q12769 1436 aa20.35■□□□□ 0.85
IKBKE-201ENST00000578328 SUPT6HQ7KZ85 1726 aaKnown RBP20.34■□□□□ 0.85
IKBKE-201ENST00000578328 SETD5Q9C0A6 1442 aa20.31■□□□□ 0.84
IKBKE-201ENST00000578328 MYOM3Q5VTT5 1437 aa20.3■□□□□ 0.84
IKBKE-201ENST00000578328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.3■□□□□ 0.84
IKBKE-201ENST00000578328 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
IKBKE-201ENST00000578328 NUP153P49790 1475 aaKnown RBP20.27■□□□□ 0.83
IKBKE-201ENST00000578328 RAPGEF6Q8TEU7 1601 aa20.26■□□□□ 0.83
IKBKE-201ENST00000578328 CARMIL2Q6F5E8 1435 aa20.26■□□□□ 0.83
IKBKE-201ENST00000578328 ARHGEF11O15085 1522 aa20.25■□□□□ 0.83
IKBKE-201ENST00000578328 PLB1Q6P1J6 1458 aa20.24■□□□□ 0.83
IKBKE-201ENST00000578328 CENPBP07199 599 aaPredicted RBP20.24■□□□□ 0.83
IKBKE-201ENST00000578328 PTPRKQ15262 1439 aa20.22■□□□□ 0.83
IKBKE-201ENST00000578328 PTPN23Q9H3S7 1636 aa20.21■□□□□ 0.83
IKBKE-201ENST00000578328 YTHDC1Q96MU7 727 aaKnown RBP20.2■□□□□ 0.82
IKBKE-201ENST00000578328 CHD1O14646 1710 aa20.19■□□□□ 0.82
IKBKE-201ENST00000578328 ZNF316A6NFI3 1004 aaPredicted RBP20.18■□□□□ 0.82
IKBKE-201ENST00000578328 CDK11AQ9UQ88 783 aaPredicted RBP20.17■□□□□ 0.82
IKBKE-201ENST00000578328 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
IKBKE-201ENST00000578328 MAPKBP1O60336 1514 aa20.14■□□□□ 0.81
IKBKE-201ENST00000578328 CHIC2Q9UKJ5 165 aa20.13■□□□□ 0.81
IKBKE-201ENST00000578328 TCOF1Q13428 1488 aaKnown RBP20.11■□□□□ 0.81
IKBKE-201ENST00000578328 HFM1A2PYH4 1435 aa20.1■□□□□ 0.81
IKBKE-201ENST00000578328 MIA2Q96PC5 1412 aa20.1■□□□□ 0.81
IKBKE-201ENST00000578328 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
IKBKE-201ENST00000578328 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.8
IKBKE-201ENST00000578328 NAIPQ13075 1403 aa20.08■□□□□ 0.8
IKBKE-201ENST00000578328 MIER1Q8N108 512 aa20.07■□□□□ 0.8
IKBKE-201ENST00000578328 ABCA8O94911 1581 aa20.07■□□□□ 0.8
IKBKE-201ENST00000578328 ZNF644Q9H582 1327 aaPredicted RBP20.07■□□□□ 0.8
IKBKE-201ENST00000578328 SIN3AQ96ST3 1273 aa20.06■□□□□ 0.8
IKBKE-201ENST00000578328 PTPRGP23470 1445 aa20.06■□□□□ 0.8
IKBKE-201ENST00000578328 ATP10BO94823 1461 aa20.03■□□□□ 0.8
IKBKE-201ENST00000578328 PLEKHD1A6NEE1 506 aa20.02■□□□□ 0.8
IKBKE-201ENST00000578328 KIF14Q15058 1648 aa20.02■□□□□ 0.8
IKBKE-201ENST00000578328 CFDP1Q9UEE9 299 aaPredicted RBP20■□□□□ 0.79
IKBKE-201ENST00000578328 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
IKBKE-201ENST00000578328 ZNF777Q9ULD5 760 aaPredicted RBP19.98■□□□□ 0.79
IKBKE-201ENST00000578328 UACAQ9BZF9 1416 aa19.98■□□□□ 0.79
IKBKE-201ENST00000578328 ERCC6L2Q5T890 1561 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms