RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 ERICH3Q5RHP9 1530 aa14.42□□□□□ -0.1
DDX42-204ENST00000577940 NUP160Q12769 1436 aa14.42□□□□□ -0.1
DDX42-204ENST00000577940 PBRM1Q86U86 1689 aa14.4□□□□□ -0.1
DDX42-204ENST00000577940 JPH4Q96JJ6 628 aa14.38□□□□□ -0.11
DDX42-204ENST00000577940 ADAMTS12P58397 1594 aa14.37□□□□□ -0.11
DDX42-204ENST00000577940 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
DDX42-204ENST00000577940 IGF1RP08069 1367 aa14.35□□□□□ -0.11
DDX42-204ENST00000577940 CEP170Q5SW79 1584 aa14.32□□□□□ -0.12
DDX42-204ENST00000577940 PRG4Q92954 1404 aaPredicted RBP14.31□□□□□ -0.12
DDX42-204ENST00000577940 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
DDX42-204ENST00000577940 CARMIL1Q5VZK9 1371 aa14.26□□□□□ -0.13
DDX42-204ENST00000577940 ERCC6L2Q5T890 1561 aa14.25□□□□□ -0.13
DDX42-204ENST00000577940 KIAA0586Q9BVV6 1533 aa14.24□□□□□ -0.13
DDX42-204ENST00000577940 SHROOM2Q13796 1616 aa14.23□□□□□ -0.13
DDX42-204ENST00000577940 CUL7Q14999 1698 aa14.16□□□□□ -0.14
DDX42-204ENST00000577940 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
DDX42-204ENST00000577940 PTPRGP23470 1445 aa14.15□□□□□ -0.14
DDX42-204ENST00000577940 CARMIL2Q6F5E8 1435 aa14.15□□□□□ -0.14
DDX42-204ENST00000577940 FAM69CQ0P6D2 419 aa14.13□□□□□ -0.15
DDX42-204ENST00000577940 TNIKQ9UKE5 1360 aa14.11□□□□□ -0.15
DDX42-204ENST00000577940 TTBK1Q5TCY1 1321 aaPredicted RBP14.11□□□□□ -0.15
DDX42-204ENST00000577940 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
DDX42-204ENST00000577940 ABCC10Q5T3U5 1492 aa14.06□□□□□ -0.16
DDX42-204ENST00000577940 MAPKBP1O60336 1514 aa14.03□□□□□ -0.16
DDX42-204ENST00000577940 IQGAP2Q13576 1575 aa14.02□□□□□ -0.16
DDX42-204ENST00000577940 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.16
DDX42-204ENST00000577940 UACAQ9BZF9 1416 aa14.01□□□□□ -0.17
DDX42-204ENST00000577940 ADCY10Q96PN6 1610 aa13.99□□□□□ -0.17
DDX42-204ENST00000577940 ABCC2Q92887 1545 aa13.99□□□□□ -0.17
DDX42-204ENST00000577940 DISP1Q96F81 1524 aa13.98□□□□□ -0.17
DDX42-204ENST00000577940 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
DDX42-204ENST00000577940 UHRF1BP1LA0JNW5 1464 aa13.98□□□□□ -0.17
DDX42-204ENST00000577940 UGGT2Q9NYU1 1516 aa13.97□□□□□ -0.17
DDX42-204ENST00000577940 PLB1Q6P1J6 1458 aa13.96□□□□□ -0.17
DDX42-204ENST00000577940 PRXQ9BXM0 1461 aa13.96□□□□□ -0.17
DDX42-204ENST00000577940 ASXL2Q76L83 1435 aa13.95□□□□□ -0.18
DDX42-204ENST00000577940 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
DDX42-204ENST00000577940 DIP2BQ9P265 1576 aa13.91□□□□□ -0.18
DDX42-204ENST00000577940 KDM5BQ9UGL1 1544 aa13.89□□□□□ -0.19
DDX42-204ENST00000577940 EEA1Q15075 1411 aa13.89□□□□□ -0.19
DDX42-204ENST00000577940 KIAA0556O60303 1618 aa13.87□□□□□ -0.19
DDX42-204ENST00000577940 KIF13AQ9H1H9 1805 aa13.86□□□□□ -0.19
DDX42-204ENST00000577940 P3H3Q8IVL6 736 aa13.85□□□□□ -0.19
DDX42-204ENST00000577940 GLI2P10070 1586 aa13.83□□□□□ -0.19
DDX42-204ENST00000577940 KCNH8Q96L42 1107 aa13.83□□□□□ -0.2
DDX42-204ENST00000577940 EPRSP07814 1512 aaKnown RBP13.83□□□□□ -0.2
DDX42-204ENST00000577940 WDR7Q9Y4E6 1490 aa13.81□□□□□ -0.2
DDX42-204ENST00000577940 TEX14Q8IWB6 1497 aa13.8□□□□□ -0.2
DDX42-204ENST00000577940 KDM6BO15054 1643 aa13.79□□□□□ -0.2
DDX42-204ENST00000577940 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
DDX42-204ENST00000577940 ARID3CA6NKF2 412 aa13.77□□□□□ -0.21
DDX42-204ENST00000577940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.77□□□□□ -0.21
DDX42-204ENST00000577940 HNRNPUL2Q1KMD3 747 aaKnown RBP13.77□□□□□ -0.21
DDX42-204ENST00000577940 ABCA8O94911 1581 aa13.76□□□□□ -0.21
DDX42-204ENST00000577940 CD109Q6YHK3 1445 aa13.76□□□□□ -0.21
DDX42-204ENST00000577940 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
DDX42-204ENST00000577940 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
DDX42-204ENST00000577940 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
DDX42-204ENST00000577940 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
DDX42-204ENST00000577940 ATP10BO94823 1461 aa13.73□□□□□ -0.21
DDX42-204ENST00000577940 PLEKHD1A6NEE1 506 aa13.71□□□□□ -0.22
DDX42-204ENST00000577940 COL17A1Q9UMD9 1497 aaPredicted RBP13.7□□□□□ -0.22
DDX42-204ENST00000577940 MAGI3Q5TCQ9 1506 aa13.7□□□□□ -0.22
DDX42-204ENST00000577940 TSPOAP1O95153 1857 aa13.7□□□□□ -0.22
DDX42-204ENST00000577940 PHLDB1Q86UU1 1377 aa13.69□□□□□ -0.22
DDX42-204ENST00000577940 MAP3K4Q9Y6R4 1608 aa13.68□□□□□ -0.22
DDX42-204ENST00000577940 FHOD3Q2V2M9 1422 aa13.67□□□□□ -0.22
DDX42-204ENST00000577940 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
DDX42-204ENST00000577940 SAMD9Q5K651 1589 aa13.66□□□□□ -0.22
DDX42-204ENST00000577940 PPRC1Q5VV67 1664 aaKnown RBP13.64□□□□□ -0.23
DDX42-204ENST00000577940 KIF21BO75037 1637 aa13.63□□□□□ -0.23
DDX42-204ENST00000577940 NUP153P49790 1475 aaKnown RBP13.62□□□□□ -0.23
DDX42-204ENST00000577940 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
DDX42-204ENST00000577940 ATP1B4Q9UN42 357 aaPredicted RBP13.61□□□□□ -0.23
DDX42-204ENST00000577940 CDK11AQ9UQ88 783 aaPredicted RBP13.61□□□□□ -0.23
DDX42-204ENST00000577940 RAPGEF6Q8TEU7 1601 aa13.6□□□□□ -0.23
DDX42-204ENST00000577940 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
DDX42-204ENST00000577940 ARAP3Q8WWN8 1544 aa13.59□□□□□ -0.23
DDX42-204ENST00000577940 FMN1Q68DA7 1419 aa13.59□□□□□ -0.23
DDX42-204ENST00000577940 RAPGEF3O95398 923 aa13.58□□□□□ -0.24
DDX42-204ENST00000577940 ADGRL1O94910 1474 aa13.57□□□□□ -0.24
DDX42-204ENST00000577940 NEO1Q92859 1461 aa13.57□□□□□ -0.24
DDX42-204ENST00000577940 ABCA9Q8IUA7 1624 aa13.54□□□□□ -0.24
DDX42-204ENST00000577940 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
DDX42-204ENST00000577940 ARID4BQ4LE39 1312 aaPredicted RBP13.51□□□□□ -0.25
DDX42-204ENST00000577940 EFCAB2Q5VUJ9 269 aa13.5□□□□□ -0.25
DDX42-204ENST00000577940 DMRT2Q9Y5R5 561 aa13.5□□□□□ -0.25
DDX42-204ENST00000577940 AKNAQ7Z591 1439 aa13.5□□□□□ -0.25
DDX42-204ENST00000577940 DENND4BO75064 1496 aaPredicted RBP13.49□□□□□ -0.25
DDX42-204ENST00000577940 FANCAO15360 1455 aa13.48□□□□□ -0.25
DDX42-204ENST00000577940 PLCH2O75038 1416 aa13.47□□□□□ -0.25
DDX42-204ENST00000577940 CDK13Q14004 1512 aaKnown RBP13.46□□□□□ -0.26
DDX42-204ENST00000577940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.45□□□□□ -0.26
DDX42-204ENST00000577940 CLIP1P30622 1438 aa13.45□□□□□ -0.26
DDX42-204ENST00000577940 TROQ12816 1431 aaPredicted RBP13.43□□□□□ -0.26
DDX42-204ENST00000577940 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
DDX42-204ENST00000577940 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
DDX42-204ENST00000577940 SCAPERQ9BY12 1400 aa13.43□□□□□ -0.26
DDX42-204ENST00000577940 HECW1Q76N89 1606 aa13.42□□□□□ -0.26
DDX42-204ENST00000577940 CASKIN1Q8WXD9 1431 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms