RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 NUP160Q12769 1436 aa17.13■□□□□ 0.33
CRLF3-202ENST00000577725 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
CRLF3-202ENST00000577725 SOCS7O14512 581 aa17.08■□□□□ 0.32
CRLF3-202ENST00000577725 PRG4Q92954 1404 aaPredicted RBP17.05■□□□□ 0.32
CRLF3-202ENST00000577725 CUX1P39880 1505 aa17.05■□□□□ 0.32
CRLF3-202ENST00000577725 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
CRLF3-202ENST00000577725 TSPOAP1O95153 1857 aa16.99■□□□□ 0.31
CRLF3-202ENST00000577725 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
CRLF3-202ENST00000577725 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
CRLF3-202ENST00000577725 JPH4Q96JJ6 628 aa16.97■□□□□ 0.31
CRLF3-202ENST00000577725 ILDR2Q71H61 639 aa16.96■□□□□ 0.31
CRLF3-202ENST00000577725 ADCY10Q96PN6 1610 aa16.96■□□□□ 0.3
CRLF3-202ENST00000577725 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
CRLF3-202ENST00000577725 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.29
CRLF3-202ENST00000577725 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
CRLF3-202ENST00000577725 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
CRLF3-202ENST00000577725 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
CRLF3-202ENST00000577725 PPRC1Q5VV67 1664 aaKnown RBP16.82■□□□□ 0.28
CRLF3-202ENST00000577725 GLI2P10070 1586 aa16.8■□□□□ 0.28
CRLF3-202ENST00000577725 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
CRLF3-202ENST00000577725 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
CRLF3-202ENST00000577725 PLB1Q6P1J6 1458 aa16.76■□□□□ 0.27
CRLF3-202ENST00000577725 ASXL2Q76L83 1435 aa16.75■□□□□ 0.27
CRLF3-202ENST00000577725 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
CRLF3-202ENST00000577725 TEX14Q8IWB6 1497 aa16.73■□□□□ 0.27
CRLF3-202ENST00000577725 ABCC2Q92887 1545 aa16.7■□□□□ 0.26
CRLF3-202ENST00000577725 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
CRLF3-202ENST00000577725 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
CRLF3-202ENST00000577725 PTPRGP23470 1445 aa16.66■□□□□ 0.26
CRLF3-202ENST00000577725 CERKQ8TCT0 537 aa16.66■□□□□ 0.26
CRLF3-202ENST00000577725 MAP3K4Q9Y6R4 1608 aa16.64■□□□□ 0.25
CRLF3-202ENST00000577725 EPRSP07814 1512 aaKnown RBP16.63■□□□□ 0.25
CRLF3-202ENST00000577725 PTPRMP28827 1452 aa16.62■□□□□ 0.25
CRLF3-202ENST00000577725 PCF11O94913 1555 aaKnown RBP16.62■□□□□ 0.25
CRLF3-202ENST00000577725 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
CRLF3-202ENST00000577725 SPATA31D1Q6ZQQ2 1576 aa16.61■□□□□ 0.25
CRLF3-202ENST00000577725 TTBK1Q5TCY1 1321 aaPredicted RBP16.58■□□□□ 0.24
CRLF3-202ENST00000577725 UHRF1BP1LA0JNW5 1464 aa16.55■□□□□ 0.24
CRLF3-202ENST00000577725 TNIKQ9UKE5 1360 aa16.55■□□□□ 0.24
CRLF3-202ENST00000577725 KIF21BO75037 1637 aa16.55■□□□□ 0.24
CRLF3-202ENST00000577725 CUL7Q14999 1698 aa16.53■□□□□ 0.24
CRLF3-202ENST00000577725 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
CRLF3-202ENST00000577725 CARMIL2Q6F5E8 1435 aa16.5■□□□□ 0.23
CRLF3-202ENST00000577725 UACAQ9BZF9 1416 aa16.5■□□□□ 0.23
CRLF3-202ENST00000577725 ADAMTSL3P82987 1691 aa16.5■□□□□ 0.23
CRLF3-202ENST00000577725 LOC105371045A0A1W2PR82 267 aa16.49■□□□□ 0.23
CRLF3-202ENST00000577725 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
CRLF3-202ENST00000577725 MAGI3Q5TCQ9 1506 aa16.46■□□□□ 0.23
CRLF3-202ENST00000577725 HSPA2P54652 639 aa16.46■□□□□ 0.23
CRLF3-202ENST00000577725 EEA1Q15075 1411 aa16.45■□□□□ 0.22
CRLF3-202ENST00000577725 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
CRLF3-202ENST00000577725 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
CRLF3-202ENST00000577725 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
CRLF3-202ENST00000577725 WDR7Q9Y4E6 1490 aa16.42■□□□□ 0.22
CRLF3-202ENST00000577725 ZCCHC11Q5TAX3 1644 aaKnown RBP16.39■□□□□ 0.21
CRLF3-202ENST00000577725 MADDQ8WXG6 1647 aa16.37■□□□□ 0.21
CRLF3-202ENST00000577725 ARAP3Q8WWN8 1544 aa16.36■□□□□ 0.21
CRLF3-202ENST00000577725 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
CRLF3-202ENST00000577725 BCORL1Q5H9F3 1711 aa16.34■□□□□ 0.21
CRLF3-202ENST00000577725 ARID4BQ4LE39 1312 aaPredicted RBP16.34■□□□□ 0.21
CRLF3-202ENST00000577725 IGF1RP08069 1367 aa16.32■□□□□ 0.2
CRLF3-202ENST00000577725 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
CRLF3-202ENST00000577725 DISP1Q96F81 1524 aa16.29■□□□□ 0.2
CRLF3-202ENST00000577725 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
CRLF3-202ENST00000577725 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
CRLF3-202ENST00000577725 IQGAP2Q13576 1575 aa16.27■□□□□ 0.2
CRLF3-202ENST00000577725 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
CRLF3-202ENST00000577725 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
CRLF3-202ENST00000577725 RIMS1Q86UR5 1692 aaKnown RBP16.26■□□□□ 0.19
CRLF3-202ENST00000577725 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
CRLF3-202ENST00000577725 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
CRLF3-202ENST00000577725 YEATS2Q9ULM3 1422 aa16.23■□□□□ 0.19
CRLF3-202ENST00000577725 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
CRLF3-202ENST00000577725 UBTFP17480 764 aaKnown RBP16.23■□□□□ 0.19
CRLF3-202ENST00000577725 CARMIL1Q5VZK9 1371 aa16.23■□□□□ 0.19
CRLF3-202ENST00000577725 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
CRLF3-202ENST00000577725 POGZQ7Z3K3 1410 aa16.16■□□□□ 0.18
CRLF3-202ENST00000577725 UGGT2Q9NYU1 1516 aa16.14■□□□□ 0.18
CRLF3-202ENST00000577725 KIAA0556O60303 1618 aa16.13■□□□□ 0.17
CRLF3-202ENST00000577725 NEO1Q92859 1461 aa16.12■□□□□ 0.17
CRLF3-202ENST00000577725 ARHGEF40Q8TER5 1519 aa16.12■□□□□ 0.17
CRLF3-202ENST00000577725 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
CRLF3-202ENST00000577725 FRMPD1Q5SYB0 1578 aa16.11■□□□□ 0.17
CRLF3-202ENST00000577725 FANCAO15360 1455 aa16.1■□□□□ 0.17
CRLF3-202ENST00000577725 PTPRTO14522 1441 aa16.1■□□□□ 0.17
CRLF3-202ENST00000577725 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
CRLF3-202ENST00000577725 STRCQ7RTU9 1775 aa16.08■□□□□ 0.17
CRLF3-202ENST00000577725 LTBP4Q8N2S1 1624 aa16.08■□□□□ 0.16
CRLF3-202ENST00000577725 TTC37Q6PGP7 1564 aa16.07■□□□□ 0.16
CRLF3-202ENST00000577725 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
CRLF3-202ENST00000577725 ABCA8O94911 1581 aa16.05■□□□□ 0.16
CRLF3-202ENST00000577725 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
CRLF3-202ENST00000577725 ABCA9Q8IUA7 1624 aa16.05■□□□□ 0.16
CRLF3-202ENST00000577725 CTTNBP2Q8WZ74 1663 aa16.03■□□□□ 0.16
CRLF3-202ENST00000577725 MED1Q15648 1581 aaPredicted RBP16.02■□□□□ 0.16
CRLF3-202ENST00000577725 UBAP1LF5GYI3 381 aa16.02■□□□□ 0.16
CRLF3-202ENST00000577725 MLECQ14165 292 aa16.02■□□□□ 0.16
CRLF3-202ENST00000577725 CLIP1P30622 1438 aa16.02■□□□□ 0.15
CRLF3-202ENST00000577725 UHRF1BP1Q6BDS2 1440 aa16.02■□□□□ 0.15
CRLF3-202ENST00000577725 DENND4BO75064 1496 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms