RNA–Protein interactions for RNA: ENST00000577543.5

TGIF1-222, Transcript of TGFB induced factor homeobox 1, human

TSL 3 BASIC

Gene TGIF1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-222	ENST00000577543	KIAA0586	Q9BVV6	1533 aa		32.74	■■■□□ 2.83
TGIF1-222	ENST00000577543	PRG4	Q92954	1404 aa	Predicted RBP	32.72	■■■□□ 2.83
TGIF1-222	ENST00000577543	RAPGEF2	Q9Y4G8	1499 aa		32.67	■■■□□ 2.82
TGIF1-222	ENST00000577543	JPH4	Q96JJ6	628 aa		32.66	■■■□□ 2.82
TGIF1-222	ENST00000577543	IQGAP2	Q13576	1575 aa		32.64	■■■□□ 2.82
TGIF1-222	ENST00000577543	CTTNBP2	Q8WZ74	1663 aa		32.59	■■■□□ 2.81
TGIF1-222	ENST00000577543	PRX	Q9BXM0	1461 aa		32.48	■■■□□ 2.79
TGIF1-222	ENST00000577543	EEA1	Q15075	1411 aa		32.41	■■■□□ 2.78
TGIF1-222	ENST00000577543	CARMIL2	Q6F5E8	1435 aa		32.4	■■■□□ 2.78
TGIF1-222	ENST00000577543	UGGT2	Q9NYU1	1516 aa		32.4	■■■□□ 2.78
TGIF1-222	ENST00000577543	TRH	P20396	242 aa	Predicted RBP	32.39	■■■□□ 2.78
TGIF1-222	ENST00000577543	ADCY10	Q96PN6	1610 aa		32.39	■■■□□ 2.78
TGIF1-222	ENST00000577543	DISP1	Q96F81	1524 aa		32.35	■■■□□ 2.77
TGIF1-222	ENST00000577543	KIAA0556	O60303	1618 aa		32.34	■■■□□ 2.77
TGIF1-222	ENST00000577543	TNIK	Q9UKE5	1360 aa		32.29	■■■□□ 2.76
TGIF1-222	ENST00000577543	CSRNP3	Q8WYN3	585 aa		32.28	■■■□□ 2.76
TGIF1-222	ENST00000577543	CHIC1	Q5VXU3	224 aa		32.27	■■■□□ 2.76
TGIF1-222	ENST00000577543	PTPRG	P23470	1445 aa		32.26	■■■□□ 2.76
TGIF1-222	ENST00000577543	KIF13A	Q9H1H9	1805 aa		32.21	■■■□□ 2.75
TGIF1-222	ENST00000577543	KIF21B	O75037	1637 aa		32.21	■■■□□ 2.75
TGIF1-222	ENST00000577543	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.2	■■■□□ 2.74
TGIF1-222	ENST00000577543	MAPKBP1	O60336	1514 aa		32.2	■■■□□ 2.74
TGIF1-222	ENST00000577543	GOLGA3	Q08378	1498 aa		32.19	■■■□□ 2.74
TGIF1-222	ENST00000577543	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.16	■■■□□ 2.74
TGIF1-222	ENST00000577543	ABCC2	Q92887	1545 aa		32.11	■■■□□ 2.73
TGIF1-222	ENST00000577543	NPM1	P06748	294 aa	Known RBP eCLIP	32.11	■■■□□ 2.73
TGIF1-222	ENST00000577543	UHRF1BP1L	A0JNW5	1464 aa		32.1	■■■□□ 2.73
TGIF1-222	ENST00000577543	UACA	Q9BZF9	1416 aa		32.08	■■■□□ 2.73
TGIF1-222	ENST00000577543	SAMD9	Q5K651	1589 aa		32.06	■■■□□ 2.72
TGIF1-222	ENST00000577543	DIP2B	Q9P265	1576 aa		32.06	■■■□□ 2.72
TGIF1-222	ENST00000577543	ABCC10	Q5T3U5	1492 aa		32.01	■■■□□ 2.71
TGIF1-222	ENST00000577543	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32	■■■□□ 2.71
TGIF1-222	ENST00000577543	ABCA8	O94911	1581 aa		31.95	■■■□□ 2.71
TGIF1-222	ENST00000577543	PLB1	Q6P1J6	1458 aa		31.95	■■■□□ 2.7
TGIF1-222	ENST00000577543	KDM5B	Q9UGL1	1544 aa		31.95	■■■□□ 2.7
TGIF1-222	ENST00000577543	ASXL2	Q76L83	1435 aa		31.88	■■■□□ 2.69
TGIF1-222	ENST00000577543	TSPOAP1	O95153	1857 aa		31.87	■■■□□ 2.69
TGIF1-222	ENST00000577543	EFCAB5	A4FU69	1503 aa		31.85	■■■□□ 2.69
TGIF1-222	ENST00000577543	FAM69C	Q0P6D2	419 aa		31.85	■■■□□ 2.69
TGIF1-222	ENST00000577543	P3H3	Q8IVL6	736 aa		31.82	■■■□□ 2.68
TGIF1-222	ENST00000577543	RAPGEF6	Q8TEU7	1601 aa		31.8	■■■□□ 2.68
TGIF1-222	ENST00000577543	RANGAP1	P46060	587 aa	Predicted RBP	31.79	■■■□□ 2.68
TGIF1-222	ENST00000577543	EHMT2	Q96KQ7	1210 aa		31.78	■■■□□ 2.68
TGIF1-222	ENST00000577543	GLI2	P10070	1586 aa		31.77	■■■□□ 2.68
TGIF1-222	ENST00000577543	FHOD3	Q2V2M9	1422 aa		31.76	■■■□□ 2.68
TGIF1-222	ENST00000577543	WDR7	Q9Y4E6	1490 aa		31.73	■■■□□ 2.67
TGIF1-222	ENST00000577543	UBTF	P17480	764 aa	Known RBP	31.73	■■■□□ 2.67
TGIF1-222	ENST00000577543	EPRS	P07814	1512 aa	Known RBP	31.71	■■■□□ 2.67
TGIF1-222	ENST00000577543	MAP3K4	Q9Y6R4	1608 aa		31.7	■■■□□ 2.66
TGIF1-222	ENST00000577543	PPRC1	Q5VV67	1664 aa	Known RBP	31.7	■■■□□ 2.66
TGIF1-222	ENST00000577543	KDM6B	O15054	1643 aa		31.61	■■■□□ 2.65
TGIF1-222	ENST00000577543	ATP10B	O94823	1461 aa		31.59	■■■□□ 2.65
TGIF1-222	ENST00000577543	NUP153	P49790	1475 aa	Known RBP	31.59	■■■□□ 2.65
TGIF1-222	ENST00000577543	CFAP43	Q8NDM7	1665 aa		31.59	■■■□□ 2.65
TGIF1-222	ENST00000577543	ARHGAP35	Q9NRY4	1499 aa		31.59	■■■□□ 2.65
TGIF1-222	ENST00000577543	ARID3C	A6NKF2	412 aa		31.58	■■■□□ 2.65
TGIF1-222	ENST00000577543	TEX14	Q8IWB6	1497 aa		31.49	■■■□□ 2.63
TGIF1-222	ENST00000577543	HECW1	Q76N89	1606 aa		31.48	■■■□□ 2.63
TGIF1-222	ENST00000577543	FMN1	Q68DA7	1419 aa		31.48	■■■□□ 2.63
TGIF1-222	ENST00000577543	ABCA9	Q8IUA7	1624 aa		31.43	■■■□□ 2.62
TGIF1-222	ENST00000577543	KCNH8	Q96L42	1107 aa		31.43	■■■□□ 2.62
TGIF1-222	ENST00000577543	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.4	■■■□□ 2.62
TGIF1-222	ENST00000577543	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.4	■■■□□ 2.62
TGIF1-222	ENST00000577543	CD109	Q6YHK3	1445 aa		31.39	■■■□□ 2.62
TGIF1-222	ENST00000577543	CDK13	Q14004	1512 aa	Known RBP	31.39	■■■□□ 2.61
TGIF1-222	ENST00000577543	MAGI3	Q5TCQ9	1506 aa		31.39	■■■□□ 2.61
TGIF1-222	ENST00000577543	LRRIQ1	Q96JM4	1722 aa		31.35	■■■□□ 2.61
TGIF1-222	ENST00000577543	PCF11	O94913	1555 aa	Known RBP	31.34	■■■□□ 2.61
TGIF1-222	ENST00000577543	CLIP1	P30622	1438 aa		31.3	■■■□□ 2.6
TGIF1-222	ENST00000577543	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.24	■■■□□ 2.59
TGIF1-222	ENST00000577543	TTC37	Q6PGP7	1564 aa		31.24	■■■□□ 2.59
TGIF1-222	ENST00000577543	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.23	■■■□□ 2.59
TGIF1-222	ENST00000577543	PLEKHD1	A6NEE1	506 aa		31.22	■■■□□ 2.59
TGIF1-222	ENST00000577543	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.2	■■■□□ 2.59	9e-7	■■■■□ 21.5
TGIF1-222	ENST00000577543	CASKIN1	Q8WXD9	1431 aa		31.2	■■■□□ 2.59
TGIF1-222	ENST00000577543	FYCO1	Q9BQS8	1478 aa		31.18	■■■□□ 2.58
TGIF1-222	ENST00000577543	CCDC18	Q5T9S5	1454 aa		31.16	■■■□□ 2.58
TGIF1-222	ENST00000577543	KIF14	Q15058	1648 aa		31.16	■■■□□ 2.58
TGIF1-222	ENST00000577543	CFAP74	Q9C0B2	1584 aa		31.15	■■■□□ 2.58
TGIF1-222	ENST00000577543	CEP162	Q5TB80	1403 aa		31.13	■■■□□ 2.57
TGIF1-222	ENST00000577543	MYO5C	Q9NQX4	1742 aa		31.12	■■■□□ 2.57
TGIF1-222	ENST00000577543	NEO1	Q92859	1461 aa		31.12	■■■□□ 2.57
TGIF1-222	ENST00000577543	ARAP3	Q8WWN8	1544 aa		31.12	■■■□□ 2.57
TGIF1-222	ENST00000577543	TRO	Q12816	1431 aa	Predicted RBP	31.07	■■■□□ 2.57
TGIF1-222	ENST00000577543	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.07	■■■□□ 2.56
TGIF1-222	ENST00000577543	PHLDB1	Q86UU1	1377 aa		31.06	■■■□□ 2.56
TGIF1-222	ENST00000577543	FANCA	O15360	1455 aa		31.03	■■■□□ 2.56
TGIF1-222	ENST00000577543	FRMPD1	Q5SYB0	1578 aa		31	■■■□□ 2.55
TGIF1-222	ENST00000577543	RICTOR	Q6R327	1708 aa		30.98	■■■□□ 2.55
TGIF1-222	ENST00000577543	PLCH2	O75038	1416 aa		30.93	■■■□□ 2.54
TGIF1-222	ENST00000577543	AKNA	Q7Z591	1439 aa		30.93	■■■□□ 2.54
TGIF1-222	ENST00000577543	LOC105371045	A0A1W2PR82	267 aa		30.93	■■■□□ 2.54
TGIF1-222	ENST00000577543	PREX2	Q70Z35	1606 aa		30.92	■■■□□ 2.54
TGIF1-222	ENST00000577543	AEBP2	Q6ZN18	517 aa	Predicted RBP	30.92	■■■□□ 2.54
TGIF1-222	ENST00000577543	CDC42BPB	Q9Y5S2	1711 aa		30.9	■■■□□ 2.54
TGIF1-222	ENST00000577543	CDC42BPA	Q5VT25	1732 aa		30.89	■■■□□ 2.54
TGIF1-222	ENST00000577543	ARHGAP5	Q13017	1502 aa		30.88	■■■□□ 2.53
TGIF1-222	ENST00000577543	DENND4B	O75064	1496 aa	Predicted RBP	30.88	■■■□□ 2.53
TGIF1-222	ENST00000577543	ADGRL1	O94910	1474 aa		30.87	■■■□□ 2.53
TGIF1-222	ENST00000577543	RAPGEF3	O95398	923 aa		30.85	■■■□□ 2.53

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms